Experiment: LB_plus_SM_buffer
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3761 and GFF3762 are separated by 413 nucleotides GFF3762 and GFF3763 are separated by 2 nucleotides
GFF3761 - Lipoprotein spr precursor, at 30,621 to 31,193
GFF3761
GFF3762 - Putative membrane protein, at 31,607 to 32,353
GFF3762
GFF3763 - Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family, at 32,356 to 33,369
GFF3763
Position (kb) 31
32
33 Strain fitness (log2 ratio) -2
-1
0
1 at 30.623 kb on - strand at 30.693 kb on - strand, within GFF3761 at 30.693 kb on - strand, within GFF3761 at 30.743 kb on - strand, within GFF3761 at 30.743 kb on - strand, within GFF3761 at 30.743 kb on - strand, within GFF3761 at 30.798 kb on - strand, within GFF3761 at 30.845 kb on - strand, within GFF3761 at 31.086 kb on - strand, within GFF3761 at 31.226 kb on - strand at 31.261 kb on + strand at 31.553 kb on - strand at 31.571 kb on + strand at 31.794 kb on - strand, within GFF3762 at 31.942 kb on + strand, within GFF3762 at 32.149 kb on + strand, within GFF3762 at 32.298 kb on - strand at 32.358 kb on - strand at 32.521 kb on + strand, within GFF3763 at 32.521 kb on + strand, within GFF3763 at 32.522 kb on - strand, within GFF3763 at 32.522 kb on - strand, within GFF3763 at 32.530 kb on - strand, within GFF3763 at 32.764 kb on + strand, within GFF3763 at 32.785 kb on + strand, within GFF3763 at 32.887 kb on - strand, within GFF3763 at 32.898 kb on + strand, within GFF3763 at 32.898 kb on + strand, within GFF3763 at 33.031 kb on + strand, within GFF3763 at 33.214 kb on - strand, within GFF3763 at 33.268 kb on - strand at 33.275 kb on - strand at 33.275 kb on - strand at 33.277 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer remove 30,623 - +0.1 30,693 - GFF3761 0.13 +0.5 30,693 - GFF3761 0.13 +0.3 30,743 - GFF3761 0.21 -0.1 30,743 - GFF3761 0.21 -1.4 30,743 - GFF3761 0.21 +0.3 30,798 - GFF3761 0.31 +0.3 30,845 - GFF3761 0.39 +0.1 31,086 - GFF3761 0.81 +0.7 31,226 - +0.2 31,261 + -1.4 31,553 - -0.8 31,571 + -0.1 31,794 - GFF3762 0.25 -1.4 31,942 + GFF3762 0.45 -1.1 32,149 + GFF3762 0.73 -0.2 32,298 - +0.2 32,358 - +0.5 32,521 + GFF3763 0.16 -0.0 32,521 + GFF3763 0.16 +0.3 32,522 - GFF3763 0.16 +0.3 32,522 - GFF3763 0.16 +0.8 32,530 - GFF3763 0.17 +0.4 32,764 + GFF3763 0.40 -2.4 32,785 + GFF3763 0.42 -0.6 32,887 - GFF3763 0.52 -0.1 32,898 + GFF3763 0.53 +0.0 32,898 + GFF3763 0.53 +0.4 33,031 + GFF3763 0.67 +0.1 33,214 - GFF3763 0.85 +0.5 33,268 - +0.3 33,275 - +0.0 33,275 - -0.1 33,277 + +0.3
Or see this region's nucleotide sequence