Experiment: LB_plus_SM_buffer
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1114 and GFF1115 are separated by 596 nucleotides GFF1115 and GFF1116 are separated by 98 nucleotides
GFF1114 - FIG01200701: possible membrane protein, at 299,557 to 300,318
GFF1114
GFF1115 - Choline-sulfatase (EC 3.1.6.6), at 300,915 to 302,408
GFF1115
GFF1116 - putative arylsulfatase regulator, at 302,507 to 303,697
GFF1116
Position (kb) 300
301
302
303 Strain fitness (log2 ratio) -1
0
1
2 at 299.991 kb on - strand, within GFF1114 at 300.938 kb on + strand at 300.938 kb on + strand at 300.944 kb on - strand at 300.944 kb on - strand at 301.076 kb on + strand, within GFF1115 at 301.085 kb on + strand, within GFF1115 at 301.086 kb on - strand, within GFF1115 at 301.086 kb on - strand, within GFF1115 at 301.090 kb on + strand, within GFF1115 at 301.128 kb on + strand, within GFF1115 at 301.132 kb on - strand, within GFF1115 at 301.184 kb on + strand, within GFF1115 at 301.375 kb on - strand, within GFF1115 at 301.375 kb on - strand, within GFF1115 at 301.376 kb on + strand, within GFF1115 at 301.377 kb on - strand, within GFF1115 at 301.476 kb on - strand, within GFF1115 at 301.502 kb on + strand, within GFF1115 at 301.503 kb on - strand, within GFF1115 at 301.551 kb on - strand, within GFF1115 at 301.553 kb on + strand, within GFF1115 at 301.579 kb on + strand, within GFF1115 at 301.579 kb on + strand, within GFF1115 at 301.579 kb on + strand, within GFF1115 at 301.579 kb on + strand, within GFF1115 at 301.582 kb on - strand, within GFF1115 at 301.637 kb on + strand, within GFF1115 at 301.638 kb on - strand, within GFF1115 at 301.689 kb on + strand, within GFF1115 at 301.867 kb on + strand, within GFF1115 at 301.962 kb on + strand, within GFF1115 at 302.007 kb on + strand, within GFF1115 at 302.051 kb on + strand, within GFF1115 at 302.074 kb on - strand, within GFF1115 at 302.116 kb on + strand, within GFF1115 at 302.229 kb on - strand, within GFF1115 at 302.234 kb on + strand, within GFF1115 at 302.235 kb on - strand, within GFF1115 at 302.244 kb on + strand, within GFF1115 at 302.244 kb on + strand, within GFF1115 at 302.415 kb on - strand at 302.415 kb on - strand at 302.432 kb on + strand at 302.505 kb on + strand at 302.506 kb on - strand at 302.730 kb on + strand, within GFF1116 at 302.804 kb on - strand, within GFF1116 at 302.804 kb on - strand, within GFF1116 at 302.904 kb on + strand, within GFF1116 at 302.991 kb on + strand, within GFF1116 at 303.029 kb on - strand, within GFF1116 at 303.083 kb on - strand, within GFF1116 at 303.360 kb on - strand, within GFF1116
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer remove 299,991 - GFF1114 0.57 +0.8 300,938 + -0.5 300,938 + +0.9 300,944 - +0.4 300,944 - +0.8 301,076 + GFF1115 0.11 +0.2 301,085 + GFF1115 0.11 +0.3 301,086 - GFF1115 0.11 -0.0 301,086 - GFF1115 0.11 +0.2 301,090 + GFF1115 0.12 +0.3 301,128 + GFF1115 0.14 +0.2 301,132 - GFF1115 0.15 -0.0 301,184 + GFF1115 0.18 +0.1 301,375 - GFF1115 0.31 -0.1 301,375 - GFF1115 0.31 -1.0 301,376 + GFF1115 0.31 -0.1 301,377 - GFF1115 0.31 -0.4 301,476 - GFF1115 0.38 +0.8 301,502 + GFF1115 0.39 +0.3 301,503 - GFF1115 0.39 -0.3 301,551 - GFF1115 0.43 +0.8 301,553 + GFF1115 0.43 -0.0 301,579 + GFF1115 0.44 +0.5 301,579 + GFF1115 0.44 -0.1 301,579 + GFF1115 0.44 +1.3 301,579 + GFF1115 0.44 +0.2 301,582 - GFF1115 0.45 +0.4 301,637 + GFF1115 0.48 -0.0 301,638 - GFF1115 0.48 +0.3 301,689 + GFF1115 0.52 +0.3 301,867 + GFF1115 0.64 +0.5 301,962 + GFF1115 0.70 +0.5 302,007 + GFF1115 0.73 +2.5 302,051 + GFF1115 0.76 -0.0 302,074 - GFF1115 0.78 +0.5 302,116 + GFF1115 0.80 +0.1 302,229 - GFF1115 0.88 +0.9 302,234 + GFF1115 0.88 +0.4 302,235 - GFF1115 0.88 +0.3 302,244 + GFF1115 0.89 +0.1 302,244 + GFF1115 0.89 +0.2 302,415 - -0.0 302,415 - +0.4 302,432 + -0.1 302,505 + +0.6 302,506 - +0.0 302,730 + GFF1116 0.19 +0.7 302,804 - GFF1116 0.25 -0.1 302,804 - GFF1116 0.25 +0.2 302,904 + GFF1116 0.33 +0.4 302,991 + GFF1116 0.41 +0.1 303,029 - GFF1116 0.44 -0.0 303,083 - GFF1116 0.48 +0.5 303,360 - GFF1116 0.72 +0.4
Or see this region's nucleotide sequence