Strain Fitness in Escherichia coli BL21 around ECD_03513

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
3,697,038	+		ECD_03512	0.44	+0.4
3,697,044	+		ECD_03512	0.45	-0.1
3,697,044	+		ECD_03512	0.45	+0.2
3,697,044	+		ECD_03512	0.45	-0.2
3,697,044	+		ECD_03512	0.45	-0.5
3,697,044	+		ECD_03512	0.45	-0.1
3,697,044	+		ECD_03512	0.45	-0.3
3,697,044	+		ECD_03512	0.45	-0.1
3,697,045	-		ECD_03512	0.45	-0.5
3,697,069	+		ECD_03512	0.46	-0.3
3,697,070	-		ECD_03512	0.47	+0.1
3,697,077	-		ECD_03512	0.47	-0.6
3,697,081	-		ECD_03512	0.47	-0.4
3,697,136	-		ECD_03512	0.51	+0.7
3,697,184	-		ECD_03512	0.55	-0.2
3,697,184	-		ECD_03512	0.55	+0.4
3,697,184	-		ECD_03512	0.55	+0.5
3,697,202	+		ECD_03512	0.56	+0.1
3,697,203	-		ECD_03512	0.56	-0.4
3,697,203	-		ECD_03512	0.56	-0.7
3,697,334	+		ECD_03512	0.66	+0.6
3,697,335	-		ECD_03512	0.66	-0.2
3,697,578	+		ECD_03512	0.83	-0.2
3,697,578	+		ECD_03512	0.83	+0.2
3,697,578	+		ECD_03512	0.83	-0.4
3,697,578	+		ECD_03512	0.83	-0.1
3,697,578	+		ECD_03512	0.83	-0.4
3,697,579	-		ECD_03512	0.83	+0.5
3,697,579	-		ECD_03512	0.83	-0.7
3,697,765	+				-0.4
3,697,768	+				-0.2
3,697,769	-				-0.8
3,697,812	-				-0.4
3,697,833	+				-0.7
3,697,833	+				-0.6
3,697,834	-				+0.3
3,697,898	+				+0.2
3,697,898	+				-0.3
3,697,898	+				+0.5
3,697,899	-				-0.6
3,697,899	-				-0.5
3,697,907	+				+0.2
3,697,908	-				+0.1
3,697,961	+				-0.9
3,697,961	+				-0.4
3,697,962	-				-0.2
3,697,980	+				+0.0
3,698,000	+				-0.2
3,698,001	-				-0.3
3,698,001	-				-0.4
3,698,001	-				-0.0
3,698,035	+				-0.4
3,698,036	-				-0.2
3,698,036	-				-0.3
3,698,059	+				-0.6
3,698,116	+		ECD_03513	0.11	-0.2
3,698,116	+		ECD_03513	0.11	-2.4
3,698,117	-		ECD_03513	0.11	-0.5
3,698,318	-		ECD_03513	0.22	-0.5
3,698,326	+		ECD_03513	0.23	-0.2
3,698,330	-		ECD_03513	0.23	-0.7
3,698,338	+		ECD_03513	0.24	-0.6
3,698,380	-		ECD_03513	0.26	-0.3
3,698,405	-		ECD_03513	0.28	-0.8
3,698,437	+		ECD_03513	0.29	+0.8
3,698,481	+		ECD_03513	0.32	+0.1
3,698,481	+		ECD_03513	0.32	-0.7
3,698,481	+		ECD_03513	0.32	+0.1
3,698,481	+		ECD_03513	0.32	-0.3
3,698,482	-		ECD_03513	0.32	-2.3
3,698,497	+		ECD_03513	0.33	-0.4
3,698,497	+		ECD_03513	0.33	-0.0
3,698,620	+		ECD_03513	0.40	+0.7
3,698,622	+		ECD_03513	0.40	-1.2
3,698,622	+		ECD_03513	0.40	+0.1
3,698,622	+		ECD_03513	0.40	-1.3
3,698,622	+		ECD_03513	0.40	-0.4
3,698,622	+		ECD_03513	0.40	-0.7
3,698,622	+		ECD_03513	0.40	-0.8
3,698,622	+		ECD_03513	0.40	-0.9
3,698,622	+		ECD_03513	0.40	-0.5
3,698,622	+		ECD_03513	0.40	-0.0
3,698,623	-		ECD_03513	0.40	-2.1
3,698,623	-		ECD_03513	0.40	-0.2
3,698,623	-		ECD_03513	0.40	-1.0
3,698,623	-		ECD_03513	0.40	-0.7
3,698,623	-		ECD_03513	0.40	-0.4
3,698,623	-		ECD_03513	0.40	-0.9
3,698,623	-		ECD_03513	0.40	-0.8
3,698,628	+		ECD_03513	0.41	-0.2
3,698,629	-		ECD_03513	0.41	-0.0
3,698,629	-		ECD_03513	0.41	-1.1
3,698,667	+		ECD_03513	0.43	-0.3
3,698,667	+		ECD_03513	0.43	-0.3
3,698,667	+		ECD_03513	0.43	-1.3
3,698,668	-		ECD_03513	0.43	-0.4
3,698,841	-		ECD_03513	0.53	-0.3
3,698,870	-		ECD_03513	0.55	-0.2
3,699,014	+		ECD_03513	0.63	-0.2
3,699,015	-		ECD_03513	0.63	-1.5
3,699,016	+		ECD_03513	0.63	-0.4
3,699,016	+		ECD_03513	0.63	-0.7
3,699,016	+		ECD_03513	0.63	-0.4
3,699,016	+		ECD_03513	0.63	-0.3
3,699,016	+		ECD_03513	0.63	-0.1
3,699,016	+		ECD_03513	0.63	+0.0
3,699,016	+		ECD_03513	0.63	-0.9
3,699,017	-		ECD_03513	0.63	-1.0
3,699,017	-		ECD_03513	0.63	-1.6
3,699,017	-		ECD_03513	0.63	-0.7
3,699,017	-		ECD_03513	0.63	-0.8
3,699,196	+		ECD_03513	0.74	-0.3
3,699,196	+		ECD_03513	0.74	-0.0
3,699,196	+		ECD_03513	0.74	+0.2
3,699,196	+		ECD_03513	0.74	+0.1
3,699,197	-		ECD_03513	0.74	-1.0
3,699,310	+		ECD_03513	0.80	-0.6
3,699,311	-		ECD_03513	0.81	+0.1
3,699,331	+		ECD_03513	0.82	-0.1
3,699,332	-		ECD_03513	0.82	-0.1
3,699,332	-		ECD_03513	0.82	-0.4
3,699,394	+		ECD_03513	0.85	-0.8
3,699,394	+		ECD_03513	0.85	-1.1
3,699,394	+		ECD_03513	0.85	-0.8
3,699,394	+		ECD_03513	0.85	-0.2
3,699,395	-		ECD_03513	0.85	-0.7
3,699,395	-		ECD_03513	0.85	-0.4
3,699,395	-		ECD_03513	0.85	-0.4
3,699,457	-		ECD_03513	0.89	-0.5
3,699,479	-				-0.4
3,699,529	+				-0.2
3,699,619	+				-0.2
3,699,619	+				-0.2
3,699,692	+				-0.6
3,699,692	+				-0.3
3,699,692	+				-0.2
3,699,697	+				-0.4
3,699,697	+				+0.2
3,699,697	+				-0.5
3,699,698	-				-0.1
3,699,698	-				-0.5
3,699,698	-				+0.0
3,699,698	-				-0.9
3,699,704	+				-0.8
3,699,704	+				-0.7
3,699,705	-				+0.8
3,699,705	-				-0.0
3,699,784	-				+0.4
3,699,860	+				-0.7
3,699,860	+				-0.2
3,699,861	-				-0.5
3,699,878	+				-0.1
3,699,878	+				-0.6
3,699,878	+				+0.2
3,699,878	+				-1.0
3,699,942	-		ECD_03514	0.11	+0.1
3,699,976	+		ECD_03514	0.12	-0.1
3,699,977	-		ECD_03514	0.12	-2.5
3,699,977	-		ECD_03514	0.12	-0.8
3,700,012	-		ECD_03514	0.14	-0.6
3,700,030	+		ECD_03514	0.14	-0.4
3,700,031	-		ECD_03514	0.14	-0.1
3,700,129	+		ECD_03514	0.19	-0.4
3,700,130	-		ECD_03514	0.19	-0.3
3,700,130	-		ECD_03514	0.19	+1.5
3,700,130	-		ECD_03514	0.19	+0.2
3,700,130	-		ECD_03514	0.19	+0.1
3,700,185	+		ECD_03514	0.21	+1.0
3,700,186	-		ECD_03514	0.21	-0.7
3,700,192	+		ECD_03514	0.21	+0.2
3,700,192	+		ECD_03514	0.21	-0.1
3,700,192	+		ECD_03514	0.21	-0.9
3,700,192	+		ECD_03514	0.21	-0.9
3,700,192	+		ECD_03514	0.21	-0.8
3,700,192	+		ECD_03514	0.21	+0.2
3,700,192	+		ECD_03514	0.21	+0.5
3,700,192	+		ECD_03514	0.21	-0.1
3,700,193	-		ECD_03514	0.21	+0.0
3,700,193	-		ECD_03514	0.21	+0.0
3,700,193	-		ECD_03514	0.21	-0.3
3,700,193	-		ECD_03514	0.21	-1.0
3,700,364	-		ECD_03514	0.29	+0.1
3,700,391	+		ECD_03514	0.30	-0.5
3,700,463	+		ECD_03514	0.33	-0.3
3,700,464	-		ECD_03514	0.33	+0.1
3,700,555	+		ECD_03514	0.37	-0.5
3,700,555	+		ECD_03514	0.37	-0.2
3,700,560	-		ECD_03514	0.37	-0.9
3,700,565	-		ECD_03514	0.37	+0.1