Strain Fitness in Escherichia coli BL21 around ECD_02540

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
2,650,425	+		ECD_02538	0.34	-0.0
2,650,429	+		ECD_02538	0.35	+1.0
2,650,429	+		ECD_02538	0.35	-2.0
2,650,429	+		ECD_02538	0.35	+0.1
2,650,429	+		ECD_02538	0.35	-1.3
2,650,430	-		ECD_02538	0.36	-1.1
2,650,430	-		ECD_02538	0.36	-2.8
2,650,430	-		ECD_02538	0.36	-0.4
2,650,507	+		ECD_02538	0.59	+0.0
2,650,507	+		ECD_02538	0.59	-1.6
2,650,508	-		ECD_02538	0.59	-0.6
2,650,564	+		ECD_02538	0.76	-0.6
2,650,564	+		ECD_02538	0.76	-3.8
2,650,564	+		ECD_02538	0.76	-1.5
2,650,565	-		ECD_02538	0.76	+0.3
2,650,579	+		ECD_02538	0.80	-0.4
2,650,580	-		ECD_02538	0.80	-0.7
2,650,597	+		ECD_02538	0.85	+0.7
2,650,598	-		ECD_02538	0.86	-0.4
2,650,610	+		ECD_02538	0.89	+1.6
2,650,639	+				+0.3
2,650,640	-				-0.7
2,650,640	-				-0.7
2,650,640	-				-2.0
2,650,640	-				-1.0
2,650,640	-				-2.1
2,650,640	-				-1.0
2,650,640	-				-1.1
2,650,640	-				-0.9
2,650,640	-				-0.3
2,650,640	-				-2.1
2,650,641	+				-0.5
2,650,641	+				+0.1
2,650,642	-				-0.5
2,650,642	-				-1.8
2,650,642	-				-0.5
2,650,642	-				+0.3
2,650,642	-				-2.8
2,650,642	-				+0.5
2,650,642	-				-2.2
2,650,643	+				+0.7
2,650,643	+				+0.2
2,650,644	-				-0.9
2,650,665	+				+0.4
2,650,673	+				+0.2
2,650,673	+				+0.5
2,650,673	+				+0.2
2,650,674	-				-2.3
2,650,679	+				-0.1
2,650,679	+				-0.3
2,650,718	+				+0.7
2,650,741	+				+0.7
2,650,741	+				+1.8
2,650,741	+				+0.5
2,650,741	+				+0.0
2,650,741	+				+0.6
2,650,805	+		ECD_02539	0.13	+0.8
2,650,870	+		ECD_02539	0.25	+0.2
2,650,921	+		ECD_02539	0.35	+0.7
2,650,921	+		ECD_02539	0.35	+0.2
2,650,921	+		ECD_02539	0.35	+1.2
2,650,948	+		ECD_02539	0.40	+0.1
2,650,948	+		ECD_02539	0.40	+0.8
2,650,948	+		ECD_02539	0.40	+0.4
2,650,948	+		ECD_02539	0.40	+0.8
2,650,965	+		ECD_02539	0.43	+0.7
2,650,965	+		ECD_02539	0.43	-0.3
2,650,965	+		ECD_02539	0.43	+0.4
2,650,965	+		ECD_02539	0.43	+0.9
2,650,965	+		ECD_02539	0.43	+0.1
2,650,965	+		ECD_02539	0.43	+0.5
2,650,965	+		ECD_02539	0.43	+0.8
2,651,005	+		ECD_02539	0.51	+1.1
2,651,005	+		ECD_02539	0.51	+1.1
2,651,085	+		ECD_02539	0.66	+0.5
2,651,121	+		ECD_02539	0.73	+1.6
2,651,121	+		ECD_02539	0.73	+0.6
2,651,134	+		ECD_02539	0.75	+0.9
2,651,134	+		ECD_02539	0.75	+0.8
2,651,134	+		ECD_02539	0.75	+2.2
2,651,134	+		ECD_02539	0.75	+1.0
2,651,134	+		ECD_02539	0.75	+0.6
2,651,264	+				-0.5
2,651,295	+				-0.1
2,651,297	+				+0.8
2,651,297	+				+1.4
2,651,297	+				-1.0
2,651,371	+				+0.4
2,651,371	+				-1.7
2,651,372	-				-1.7
2,651,392	+				-2.0
2,651,392	+				-1.3
2,651,485	+				+0.0
2,651,485	+				-2.3
2,651,487	+				-2.0
2,651,487	+				-1.1
2,651,487	+				-2.0
2,651,491	+				-0.7
2,651,491	+				-3.1
2,651,491	+				-3.0
2,651,491	+				-2.1
2,651,491	+				-0.6
2,651,513	+		ECD_02540	0.10	-1.1
2,651,514	-		ECD_02540	0.10	-1.4
2,651,558	+		ECD_02540	0.14	-1.6
2,651,558	+		ECD_02540	0.14	-2.8
2,651,558	+		ECD_02540	0.14	-0.9
2,651,558	+		ECD_02540	0.14	-1.0
2,651,584	+		ECD_02540	0.16	-3.0
2,651,584	+		ECD_02540	0.16	-1.2
2,651,584	+		ECD_02540	0.16	-2.1
2,651,584	+		ECD_02540	0.16	+0.1
2,651,584	+		ECD_02540	0.16	-1.5
2,651,584	+		ECD_02540	0.16	-3.7
2,651,752	+		ECD_02540	0.31	+0.8
2,651,752	+		ECD_02540	0.31	+0.3
2,651,776	+		ECD_02540	0.33	-1.5
2,651,819	+		ECD_02540	0.36	-2.6
2,651,820	-		ECD_02540	0.36	-2.0
2,651,933	+		ECD_02540	0.46	-0.6
2,651,933	+		ECD_02540	0.46	-0.1
2,651,933	+		ECD_02540	0.46	+0.0
2,651,933	+		ECD_02540	0.46	-0.8
2,651,933	+		ECD_02540	0.46	-2.9
2,651,933	+		ECD_02540	0.46	+0.2
2,651,933	+		ECD_02540	0.46	-2.3
2,651,933	+		ECD_02540	0.46	+0.6
2,651,933	+		ECD_02540	0.46	-0.2
2,651,933	+		ECD_02540	0.46	-0.6
2,651,933	+		ECD_02540	0.46	-1.8
2,651,933	+		ECD_02540	0.46	-0.7
2,651,934	-		ECD_02540	0.46	-2.6
2,651,934	-		ECD_02540	0.46	-0.6
2,651,934	-		ECD_02540	0.46	-1.8
2,651,934	-		ECD_02540	0.46	-2.3
2,651,934	-		ECD_02540	0.46	-2.5
2,651,965	+		ECD_02540	0.49	-0.4
2,651,965	+		ECD_02540	0.49	-1.8
2,651,965	+		ECD_02540	0.49	-0.7
2,652,009	+		ECD_02540	0.53	-1.3
2,652,009	+		ECD_02540	0.53	+0.2
2,652,009	+		ECD_02540	0.53	+1.0
2,652,009	+		ECD_02540	0.53	-1.0
2,652,009	+		ECD_02540	0.53	-1.5
2,652,009	+		ECD_02540	0.53	-0.1
2,652,013	+		ECD_02540	0.53	-1.0
2,652,037	+		ECD_02540	0.55	+0.5
2,652,037	+		ECD_02540	0.55	-0.7
2,652,038	-		ECD_02540	0.55	-2.9
2,652,043	+		ECD_02540	0.55	-1.5
2,652,043	+		ECD_02540	0.55	-1.6
2,652,043	+		ECD_02540	0.55	-0.2
2,652,043	+		ECD_02540	0.55	-0.7
2,652,043	+		ECD_02540	0.55	-0.2
2,652,043	+		ECD_02540	0.55	-2.8
2,652,044	-		ECD_02540	0.55	-2.1
2,652,065	+		ECD_02540	0.57	-0.9
2,652,065	+		ECD_02540	0.57	-0.0
2,652,145	+		ECD_02540	0.64	+0.0
2,652,145	+		ECD_02540	0.64	-0.1
2,652,145	+		ECD_02540	0.64	+0.2
2,652,145	+		ECD_02540	0.64	-0.8
2,652,145	+		ECD_02540	0.64	-1.6
2,652,145	+		ECD_02540	0.64	-1.7
2,652,145	+		ECD_02540	0.64	-0.8
2,652,145	+		ECD_02540	0.64	-2.1
2,652,145	+		ECD_02540	0.64	-1.3
2,652,145	+		ECD_02540	0.64	-1.5
2,652,145	+		ECD_02540	0.64	-0.6
2,652,145	+		ECD_02540	0.64	-1.2
2,652,145	+		ECD_02540	0.64	-0.9
2,652,146	-		ECD_02540	0.64	-0.1
2,652,146	-		ECD_02540	0.64	-1.3
2,652,146	-		ECD_02540	0.64	-1.8
2,652,146	-		ECD_02540	0.64	-1.7
2,652,187	+		ECD_02540	0.68	+0.0
2,652,211	+		ECD_02540	0.70	-1.7
2,652,212	-		ECD_02540	0.70	-1.3
2,652,223	+		ECD_02540	0.71	-0.1
2,652,223	+		ECD_02540	0.71	-1.1
2,652,223	+		ECD_02540	0.71	-1.1
2,652,224	-		ECD_02540	0.71	-1.4
2,652,245	+		ECD_02540	0.73	-0.4
2,652,245	+		ECD_02540	0.73	-0.5
2,652,245	+		ECD_02540	0.73	-2.5
2,652,245	+		ECD_02540	0.73	-0.2
2,652,245	+		ECD_02540	0.73	-1.0
2,652,245	+		ECD_02540	0.73	-1.4
2,652,283	+		ECD_02540	0.76	-1.6
2,652,430	+		ECD_02540	0.88	-1.2
2,652,431	-		ECD_02540	0.88	-1.8
2,652,453	+				+0.2
2,652,453	+				-0.4
2,652,463	+				-2.6
2,652,463	+				-1.9
2,652,463	+				-1.6
2,652,463	+				+0.3
2,652,463	+				-2.1
2,652,463	+				-1.0
2,652,463	+				-2.4
2,652,463	+				+0.9
2,652,468	+				+0.4
2,652,468	+				-2.5
2,652,468	+				-1.3
2,652,468	+				-1.3
2,652,468	+				-1.2
2,652,468	+				-0.3
2,652,468	+				-0.8
2,652,468	+				+0.4
2,652,468	+				-1.5
2,652,526	+				-0.7
2,652,526	+				-1.0
2,652,526	+				-0.3
2,652,526	+				-0.1
2,652,546	+				-1.2
2,652,546	+				-1.0
2,652,546	+				-0.1
2,652,890	+		ECD_02541	0.20	-1.3
2,652,890	+		ECD_02541	0.20	-1.5
2,652,891	-		ECD_02541	0.20	-1.0
2,652,891	-		ECD_02541	0.20	-0.6
2,652,958	+		ECD_02541	0.24	-0.3
2,652,958	+		ECD_02541	0.24	-1.6
2,652,958	+		ECD_02541	0.24	-0.9
2,652,968	+		ECD_02541	0.25	-1.1
2,652,968	+		ECD_02541	0.25	-0.7
2,652,968	+		ECD_02541	0.25	-1.2
2,652,968	+		ECD_02541	0.25	-1.8
2,652,972	+		ECD_02541	0.25	-0.3
2,652,972	+		ECD_02541	0.25	-1.6
2,653,059	+		ECD_02541	0.31	-1.4
2,653,059	+		ECD_02541	0.31	-0.2
2,653,059	+		ECD_02541	0.31	-2.5
2,653,060	-		ECD_02541	0.31	-2.2
2,653,061	+		ECD_02541	0.31	-1.4
2,653,061	+		ECD_02541	0.31	-1.5
2,653,061	+		ECD_02541	0.31	-2.6
2,653,061	+		ECD_02541	0.31	-2.1
2,653,075	-		ECD_02541	0.32	-2.0
2,653,075	-		ECD_02541	0.32	+0.6
2,653,211	+		ECD_02541	0.41	-0.9
2,653,283	+		ECD_02541	0.46	-1.7
2,653,409	+		ECD_02541	0.54	-1.7
2,653,422	+		ECD_02541	0.55	+1.1
2,653,422	+		ECD_02541	0.55	-0.1
2,653,422	+		ECD_02541	0.55	-0.3
2,653,423	+		ECD_02541	0.55	-1.2
2,653,424	+		ECD_02541	0.55	+1.2
2,653,424	+		ECD_02541	0.55	-2.6
2,653,424	+		ECD_02541	0.55	-0.5
2,653,424	+		ECD_02541	0.55	-1.3
2,653,424	+		ECD_02541	0.55	-1.3
2,653,424	+		ECD_02541	0.55	-0.8
2,653,424	+		ECD_02541	0.55	-1.2
2,653,424	+		ECD_02541	0.55	-0.6
2,653,424	+		ECD_02541	0.55	-2.4
2,653,424	+		ECD_02541	0.55	-0.5
2,653,425	-		ECD_02541	0.55	-1.1
2,653,425	-		ECD_02541	0.55	-3.5
2,653,431	+		ECD_02541	0.55	-0.2
2,653,431	+		ECD_02541	0.55	-0.3