Strain Fitness in Escherichia coli BL21 around ECD_02168

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02167 and ECD_02168 overlap by 11 nucleotidesECD_02168 and ECD_02169 overlap by 4 nucleotides ECD_02167: ECD_02167 - anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit, at 2,243,016 to 2,244,644 _02167 ECD_02168: ECD_02168 - anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit, at 2,244,634 to 2,245,893 _02168 ECD_02169: ECD_02169 - anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster, at 2,245,890 to 2,247,080 _02169 Position (kb) 2244 2245 2246Strain fitness (log2 ratio) -3 -2 -1 0 1at 2243.781 kb on - strand, within ECD_02167at 2243.827 kb on + strand, within ECD_02167at 2243.831 kb on + strand, within ECD_02167at 2244.313 kb on + strand, within ECD_02167at 2244.314 kb on - strand, within ECD_02167at 2244.314 kb on - strand, within ECD_02167at 2244.597 kb on + strandat 2244.654 kb on + strandat 2245.050 kb on - strand, within ECD_02168at 2245.244 kb on + strand, within ECD_02168at 2245.244 kb on + strand, within ECD_02168at 2245.257 kb on + strand, within ECD_02168at 2245.257 kb on + strand, within ECD_02168at 2245.350 kb on - strand, within ECD_02168at 2245.666 kb on + strand, within ECD_02168at 2245.666 kb on + strand, within ECD_02168at 2245.666 kb on + strand, within ECD_02168at 2245.667 kb on - strand, within ECD_02168at 2245.668 kb on + strand, within ECD_02168at 2245.919 kb on + strandat 2245.919 kb on + strandat 2246.345 kb on - strand, within ECD_02169at 2246.364 kb on + strand, within ECD_02169at 2246.364 kb on + strand, within ECD_02169at 2246.365 kb on - strand, within ECD_02169at 2246.366 kb on + strand, within ECD_02169at 2246.367 kb on - strand, within ECD_02169at 2246.407 kb on - strand, within ECD_02169at 2246.584 kb on + strand, within ECD_02169

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
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2,243,781 - ECD_02167 0.47 +0.1
2,243,827 + ECD_02167 0.50 -0.5
2,243,831 + ECD_02167 0.50 -0.7
2,244,313 + ECD_02167 0.80 +0.5
2,244,314 - ECD_02167 0.80 -2.7
2,244,314 - ECD_02167 0.80 -1.9
2,244,597 + +0.4
2,244,654 + +1.0
2,245,050 - ECD_02168 0.33 -0.1
2,245,244 + ECD_02168 0.48 -0.7
2,245,244 + ECD_02168 0.48 -0.6
2,245,257 + ECD_02168 0.49 +0.5
2,245,257 + ECD_02168 0.49 -2.8
2,245,350 - ECD_02168 0.57 -2.2
2,245,666 + ECD_02168 0.82 -0.9
2,245,666 + ECD_02168 0.82 +0.3
2,245,666 + ECD_02168 0.82 +1.1
2,245,667 - ECD_02168 0.82 -2.0
2,245,668 + ECD_02168 0.82 +0.7
2,245,919 + -0.5
2,245,919 + +0.1
2,246,345 - ECD_02169 0.38 -0.9
2,246,364 + ECD_02169 0.40 -0.5
2,246,364 + ECD_02169 0.40 +1.1
2,246,365 - ECD_02169 0.40 +0.4
2,246,366 + ECD_02169 0.40 -0.5
2,246,367 - ECD_02169 0.40 -1.5
2,246,407 - ECD_02169 0.43 -0.0
2,246,584 + ECD_02169 0.58 -2.5

Or see this region's nucleotide sequence