Strain Fitness in Escherichia coli BL21 around ECD_01696

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01694 and ECD_01695 are separated by 40 nucleotidesECD_01695 and ECD_01696 are separated by 146 nucleotidesECD_01696 and ECD_01697 are separated by 162 nucleotidesECD_01697 and ECD_01698 are separated by 132 nucleotides ECD_01694: ECD_01694 - fructosamine kinase family protein, at 1,752,209 to 1,753,069 _01694 ECD_01695: ECD_01695 - putative inner membrane protein, at 1,753,110 to 1,753,646 _01695 ECD_01696: ECD_01696 - 2-deoxyglucose-6-P phosphatase, at 1,753,793 to 1,754,461 _01696 ECD_01697: ECD_01697 - inner membrane protein regulated by LexA, at 1,754,624 to 1,755,214 _01697 ECD_01698: ECD_01698 - putative transporter, at 1,755,347 to 1,756,738 _01698 Position (kb) 1753 1754 1755Strain fitness (log2 ratio) -2 -1 0 1 2at 1752.943 kb on - strand, within ECD_01694at 1753.175 kb on - strand, within ECD_01695at 1753.691 kb on + strandat 1753.691 kb on + strandat 1753.739 kb on - strandat 1753.744 kb on + strandat 1753.759 kb on - strandat 1754.152 kb on + strand, within ECD_01696at 1754.250 kb on + strand, within ECD_01696at 1755.164 kb on - strandat 1755.260 kb on + strandat 1755.260 kb on + strandat 1755.325 kb on + strandat 1755.326 kb on - strandat 1755.328 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
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1,752,943 - ECD_01694 0.85 -1.8
1,753,175 - ECD_01695 0.12 +0.4
1,753,691 + +0.5
1,753,691 + -1.8
1,753,739 - +0.1
1,753,744 + +1.1
1,753,759 - -1.0
1,754,152 + ECD_01696 0.54 -1.0
1,754,250 + ECD_01696 0.68 -0.8
1,755,164 - +2.1
1,755,260 + -0.3
1,755,260 + -1.8
1,755,325 + -1.1
1,755,326 - -1.6
1,755,328 + +0.7

Or see this region's nucleotide sequence