Strain Fitness in Escherichia coli BW25113 around b3580

Experiment: limonene 2.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	limonene 2.5 vol%
3,744,137	-				+0.4
3,744,140	-				-0.1
3,744,154	-				-1.0
3,744,165	-				-0.4
3,744,170	-				+0.3
3,744,170	-				+2.2
3,744,170	-				-0.1
3,744,170	-				+0.0
3,744,175	-				-0.1
3,744,180	-				+0.9
3,744,180	-				+0.7
3,744,187	-				-0.5
3,744,220	-	yiaO	b3579	0.10	+0.2
3,744,224	-	yiaO	b3579	0.11	+0.6
3,744,241	-	yiaO	b3579	0.13	+1.6
3,744,244	-	yiaO	b3579	0.13	-0.3
3,744,244	-	yiaO	b3579	0.13	+1.0
3,744,314	-	yiaO	b3579	0.20	+0.4
3,744,319	-	yiaO	b3579	0.20	-0.6
3,744,319	-	yiaO	b3579	0.20	+0.9
3,744,330	-	yiaO	b3579	0.22	-1.2
3,744,330	-	yiaO	b3579	0.22	+0.4
3,744,333	-	yiaO	b3579	0.22	-0.7
3,744,337	-	yiaO	b3579	0.22	-0.1
3,744,343	-	yiaO	b3579	0.23	-0.9
3,744,343	-	yiaO	b3579	0.23	-0.3
3,744,343	-	yiaO	b3579	0.23	-0.3
3,744,343	-	yiaO	b3579	0.23	+0.0
3,744,349	-	yiaO	b3579	0.24	+0.1
3,744,356	-	yiaO	b3579	0.24	+0.5
3,744,417	-	yiaO	b3579	0.30	-0.3
3,744,454	-	yiaO	b3579	0.34	-0.5
3,744,488	-	yiaO	b3579	0.38	+0.1
3,744,510	+	yiaO	b3579	0.40	-1.0
3,744,510	+	yiaO	b3579	0.40	+0.0
3,744,568	-	yiaO	b3579	0.46	-0.1
3,744,692	-	yiaO	b3579	0.58	+0.2
3,744,698	+	yiaO	b3579	0.59	+0.0
3,744,698	+	yiaO	b3579	0.59	-1.1
3,744,699	+	yiaO	b3579	0.59	+0.2
3,744,732	+	yiaO	b3579	0.62	-0.4
3,744,751	-	yiaO	b3579	0.64	-0.3
3,744,858	-	yiaO	b3579	0.75	+0.0
3,744,865	-	yiaO	b3579	0.76	+0.0
3,745,064	+				+0.1
3,745,064	+				+0.1
3,745,091	-				+0.5
3,745,091	-				-0.2
3,745,095	-				+0.6
3,745,163	+				-0.8
3,745,196	+				-1.0
3,745,196	+				-0.7
3,745,257	-	lyxK	b3580	0.10	+0.1
3,745,257	-	lyxK	b3580	0.10	-0.5
3,745,276	-	lyxK	b3580	0.11	-0.7
3,745,295	+	lyxK	b3580	0.13	-0.0
3,745,295	+	lyxK	b3580	0.13	+0.2
3,745,492	-	lyxK	b3580	0.26	-0.2
3,745,538	-	lyxK	b3580	0.29	-0.7
3,745,578	-	lyxK	b3580	0.31	+0.1
3,745,629	-	lyxK	b3580	0.35	-1.0
3,745,652	+	lyxK	b3580	0.36	-0.5
3,745,666	+	lyxK	b3580	0.37	-1.2
3,745,712	-	lyxK	b3580	0.40	+0.8
3,745,727	+	lyxK	b3580	0.41	+0.6
3,745,728	+	lyxK	b3580	0.41	-0.5
3,745,767	-	lyxK	b3580	0.44	+0.3
3,745,785	+	lyxK	b3580	0.45	+0.6
3,745,881	-	lyxK	b3580	0.52	+0.0
3,745,881	-	lyxK	b3580	0.52	-0.0
3,745,900	-	lyxK	b3580	0.53	+0.5
3,745,973	+	lyxK	b3580	0.58	-0.4
3,745,973	+	lyxK	b3580	0.58	-0.4
3,746,056	-	lyxK	b3580	0.63	+0.6
3,746,056	-	lyxK	b3580	0.63	-0.6
3,746,070	+	lyxK	b3580	0.64	+0.6
3,746,086	+	lyxK	b3580	0.65	-0.6
3,746,133	+	lyxK	b3580	0.69	-0.8
3,746,138	-	lyxK	b3580	0.69	-0.3
3,746,181	+	lyxK	b3580	0.72	-1.5
3,746,181	+	lyxK	b3580	0.72	-0.2
3,746,198	-	lyxK	b3580	0.73	-0.9
3,746,198	-	lyxK	b3580	0.73	+1.1
3,746,286	+	lyxK	b3580	0.79	+0.6
3,746,293	+	lyxK	b3580	0.79	-0.9
3,746,295	-	lyxK	b3580	0.79	-0.3
3,746,295	-	lyxK	b3580	0.79	+0.4
3,746,349	+	lyxK	b3580	0.83	-1.0
3,746,349	+	lyxK	b3580	0.83	-0.1
3,746,399	+	lyxK	b3580	0.86	+0.6
3,746,399	+	lyxK	b3580	0.86	-0.2
3,746,423	+	lyxK	b3580	0.88	-1.2
3,746,457	+				-0.2
3,746,562	-				-0.6
3,746,570	-				-0.0
3,746,581	+				-0.6
3,746,594	+				-1.3
3,746,594	+				-0.6
3,746,596	+				-1.4
3,746,641	+				-0.3
3,746,643	-				+0.4
3,746,726	+	sgbH	b3581	0.19	-0.4
3,746,726	+	sgbH	b3581	0.19	-0.3
3,746,800	-	sgbH	b3581	0.30	+0.6
3,746,839	+	sgbH	b3581	0.36	-0.7
3,746,852	+	sgbH	b3581	0.38	-0.0
3,746,852	+	sgbH	b3581	0.38	-0.1
3,746,860	-	sgbH	b3581	0.39	-1.1
3,746,928	+	sgbH	b3581	0.49	-0.1
3,746,936	-	sgbH	b3581	0.51	+0.3
3,746,936	-	sgbH	b3581	0.51	-0.0
3,746,959	-	sgbH	b3581	0.54	+0.1
3,746,978	-	sgbH	b3581	0.57	-0.7
3,747,007	-	sgbH	b3581	0.61	-0.5
3,747,117	+	sgbH	b3581	0.78	+0.1
3,747,249	+				-0.2
3,747,600	+	sgbU	b3582	0.40	-1.2