Strain Fitness in Escherichia coli BL21 around ECD_03719

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
3,917,648	-				-0.7
3,917,648	-				-0.1
3,917,648	-				-0.6
3,917,648	-				-0.1
3,917,710	+				+0.8
3,917,711	-				-0.4
3,917,711	-				-0.3
3,917,787	+				-0.8
3,917,787	+				-0.7
3,917,787	+				-0.2
3,917,787	+				-0.3
3,917,787	+				-0.7
3,917,787	+				-0.5
3,917,787	+				-0.0
3,917,788	-				-1.3
3,917,788	-				-0.3
3,917,788	-				-0.5
3,917,788	-				-0.5
3,917,788	-				-0.3
3,917,788	-				-0.7
3,917,788	-				+0.1
3,917,788	-				-0.1
3,917,788	-				-0.4
3,917,788	-				-1.4
3,917,788	-				-0.3
3,917,788	-				-0.4
3,917,788	-				-1.1
3,917,788	-				-0.4
3,917,788	-				-0.9
3,917,788	-				-0.7
3,917,789	+				-1.0
3,917,789	+				-0.4
3,917,789	+				-0.8
3,917,789	+				-0.4
3,917,790	-				-0.8
3,917,790	-				-0.4
3,917,790	-				-0.6
3,917,790	-				-0.2
3,917,790	-				-0.1
3,917,825	+				-0.4
3,917,846	+				-0.3
3,917,846	+				+0.0
3,917,966	+		ECD_03718	0.23	+0.0
3,917,966	+		ECD_03718	0.23	+0.0
3,917,966	+		ECD_03718	0.23	-1.3
3,918,008	+		ECD_03718	0.28	+0.3
3,918,008	+		ECD_03718	0.28	-0.3
3,918,009	-		ECD_03718	0.29	-1.0
3,918,015	-		ECD_03718	0.29	-0.1
3,918,015	-		ECD_03718	0.29	-0.2
3,918,015	-		ECD_03718	0.29	-1.1
3,918,092	+		ECD_03718	0.39	-0.2
3,918,093	-		ECD_03718	0.40	-0.3
3,918,095	+		ECD_03718	0.40	-0.3
3,918,095	+		ECD_03718	0.40	+0.2
3,918,096	-		ECD_03718	0.40	+0.3
3,918,197	+		ECD_03718	0.53	+0.1
3,918,198	-		ECD_03718	0.53	+0.1
3,918,269	+		ECD_03718	0.63	-0.0
3,918,270	-		ECD_03718	0.63	-0.2
3,918,276	+		ECD_03718	0.64	-0.1
3,918,276	+		ECD_03718	0.64	+0.4
3,918,277	-		ECD_03718	0.64	+0.0
3,918,299	+		ECD_03718	0.67	-0.0
3,918,300	-		ECD_03718	0.67	-0.1
3,918,300	-		ECD_03718	0.67	-0.9
3,918,303	+		ECD_03718	0.67	-0.5
3,918,304	-		ECD_03718	0.67	+0.0
3,918,304	-		ECD_03718	0.67	+0.1
3,918,304	-		ECD_03718	0.67	-0.3
3,918,330	-		ECD_03718	0.71	-0.2
3,918,330	-		ECD_03718	0.71	-0.1
3,918,338	+		ECD_03718	0.72	+0.2
3,918,338	+		ECD_03718	0.72	+0.1
3,918,338	+		ECD_03718	0.72	-0.2
3,918,338	+		ECD_03718	0.72	+0.1
3,918,339	-		ECD_03718	0.72	-0.7
3,918,339	-		ECD_03718	0.72	-1.2
3,918,339	-		ECD_03718	0.72	-0.2
3,918,372	+		ECD_03718	0.76	-0.4
3,918,372	+		ECD_03718	0.76	-0.2
3,918,372	+		ECD_03718	0.76	-0.3
3,918,373	-		ECD_03718	0.76	-0.6
3,918,373	-		ECD_03718	0.76	-0.3
3,918,432	-		ECD_03718	0.84	+0.4
3,918,589	+				-0.5
3,918,590	-				-1.1
3,918,590	-				-0.1
3,918,610	-				+0.4
3,918,639	-				-0.2
3,918,731	+				-0.7
3,918,831	-		ECD_03719	0.16	-0.5
3,918,865	+		ECD_03719	0.19	-0.4
3,918,865	+		ECD_03719	0.19	+0.1
3,918,866	-		ECD_03719	0.19	-0.1
3,918,908	+		ECD_03719	0.21	-0.5
3,918,909	-		ECD_03719	0.22	-0.0
3,918,909	-		ECD_03719	0.22	-0.2
3,918,966	+		ECD_03719	0.25	-0.6
3,918,966	+		ECD_03719	0.25	+0.3
3,918,966	+		ECD_03719	0.25	-1.0
3,918,966	+		ECD_03719	0.25	-1.1
3,918,966	+		ECD_03719	0.25	+0.2
3,918,969	+		ECD_03719	0.26	-1.4
3,918,970	-		ECD_03719	0.26	-0.6
3,919,007	+		ECD_03719	0.28	-0.9
3,919,007	+		ECD_03719	0.28	-0.4
3,919,007	+		ECD_03719	0.28	-0.1
3,919,007	+		ECD_03719	0.28	-0.4
3,919,007	+		ECD_03719	0.28	-1.5
3,919,008	-		ECD_03719	0.28	-0.8
3,919,008	-		ECD_03719	0.28	-0.2
3,919,008	-		ECD_03719	0.28	-0.7
3,919,008	-		ECD_03719	0.28	-0.5
3,919,008	-		ECD_03719	0.28	-0.5
3,919,008	-		ECD_03719	0.28	-0.1
3,919,008	-		ECD_03719	0.28	-0.3
3,919,008	-		ECD_03719	0.28	-0.6
3,919,008	-		ECD_03719	0.28	-0.0
3,919,009	+		ECD_03719	0.28	-0.2
3,919,009	+		ECD_03719	0.28	-0.6
3,919,009	+		ECD_03719	0.28	-0.5
3,919,010	-		ECD_03719	0.28	-0.1
3,919,010	-		ECD_03719	0.28	+0.3
3,919,010	-		ECD_03719	0.28	-0.3
3,919,010	-		ECD_03719	0.28	+0.4
3,919,010	-		ECD_03719	0.28	+0.2
3,919,124	+		ECD_03719	0.36	-0.8
3,919,124	+		ECD_03719	0.36	-0.5
3,919,124	+		ECD_03719	0.36	-0.3
3,919,125	-		ECD_03719	0.36	-0.5
3,919,125	-		ECD_03719	0.36	-0.2
3,919,125	-		ECD_03719	0.36	-1.1
3,919,125	-		ECD_03719	0.36	+0.2
3,919,125	-		ECD_03719	0.36	-1.7
3,919,125	-		ECD_03719	0.36	-0.2
3,919,128	+		ECD_03719	0.36	-0.8
3,919,129	-		ECD_03719	0.36	-1.6
3,919,196	+		ECD_03719	0.41	-0.9
3,919,217	+		ECD_03719	0.42	-0.3
3,919,339	-		ECD_03719	0.50	-0.2
3,919,460	+		ECD_03719	0.58	-0.1
3,919,497	-		ECD_03719	0.61	+0.5
3,919,531	-		ECD_03719	0.63	-0.3
3,919,575	-		ECD_03719	0.66	+0.7
3,919,674	+		ECD_03719	0.73	-0.3
3,919,674	+		ECD_03719	0.73	+0.1
3,919,847	+		ECD_03719	0.84	-1.2
3,919,847	+		ECD_03719	0.84	-0.1
3,919,848	-		ECD_03719	0.85	-0.3
3,919,848	-		ECD_03719	0.85	-0.3
3,919,848	-		ECD_03719	0.85	-0.2
3,919,848	-		ECD_03719	0.85	+0.1
3,919,858	+		ECD_03719	0.85	-0.7
3,920,037	+				-0.0
3,920,037	+				-0.6
3,920,038	-				-0.7
3,920,038	-				-2.3
3,920,219	+		ECD_03720	0.25	-0.3
3,920,243	+		ECD_03720	0.30	+0.0
3,920,243	+		ECD_03720	0.30	-1.1
3,920,244	-		ECD_03720	0.30	-0.1
3,920,244	-		ECD_03720	0.30	-0.2
3,920,244	-		ECD_03720	0.30	+1.4
3,920,244	-		ECD_03720	0.30	-0.1
3,920,244	-		ECD_03720	0.30	-0.3
3,920,246	+		ECD_03720	0.30	-0.3
3,920,247	-		ECD_03720	0.31	+0.3
3,920,247	-		ECD_03720	0.31	+0.6
3,920,247	-		ECD_03720	0.31	+0.2
3,920,263	+		ECD_03720	0.34	-0.4
3,920,263	+		ECD_03720	0.34	-0.3
3,920,264	-		ECD_03720	0.34	-0.4
3,920,279	+		ECD_03720	0.37	-0.1
3,920,279	+		ECD_03720	0.37	-0.2
3,920,280	-		ECD_03720	0.37	+0.9
3,920,281	+		ECD_03720	0.37	-0.5
3,920,281	+		ECD_03720	0.37	-0.2
3,920,281	+		ECD_03720	0.37	+0.2
3,920,282	-		ECD_03720	0.37	-0.4
3,920,282	-		ECD_03720	0.37	+0.4
3,920,282	-		ECD_03720	0.37	+0.2
3,920,282	-		ECD_03720	0.37	-0.8
3,920,282	-		ECD_03720	0.37	-0.5
3,920,379	+		ECD_03720	0.56	+0.1
3,920,419	+		ECD_03720	0.64	-0.2
3,920,419	+		ECD_03720	0.64	-0.6
3,920,419	+		ECD_03720	0.64	-0.0
3,920,419	+		ECD_03720	0.64	-0.2
3,920,419	+		ECD_03720	0.64	+0.2
3,920,419	+		ECD_03720	0.64	-0.5
3,920,419	+		ECD_03720	0.64	-0.2
3,920,419	+		ECD_03720	0.64	-0.1
3,920,420	-		ECD_03720	0.65	+0.4
3,920,420	-		ECD_03720	0.65	-0.0
3,920,420	-		ECD_03720	0.65	-1.0
3,920,420	-		ECD_03720	0.65	-0.1
3,920,427	-		ECD_03720	0.66	-0.2
3,920,427	-		ECD_03720	0.66	-1.1
3,920,487	-		ECD_03720	0.78	+0.3
3,920,517	+		ECD_03720	0.84	+0.0
3,920,517	+		ECD_03720	0.84	+0.1
3,920,518	-		ECD_03720	0.84	+0.4
3,920,518	-		ECD_03720	0.84	+0.2
3,920,604	+				-0.1
3,920,708	+				-1.2
3,920,708	+				-0.8
3,920,708	+				-0.3
3,920,708	+				-0.4
3,920,708	+				-0.6
3,920,708	+				+0.0
3,920,708	+				-0.7
3,920,708	+				-1.3
3,920,708	+				+0.2
3,920,708	+				-0.8
3,920,708	+				-1.3
3,920,708	+				-0.5
3,920,709	-				+0.0
3,920,709	-				-0.7
3,920,709	-				-0.0
3,920,709	-				-0.4
3,920,709	-				-0.7
3,920,709	-				-0.3
3,920,709	-				+0.0
3,920,709	-				-0.4
3,920,709	-				+0.4
3,920,709	-				-0.0
3,920,952	+		ECD_03721	0.35	-0.8
3,920,952	+		ECD_03721	0.35	-0.2
3,920,953	-		ECD_03721	0.35	+0.0
3,920,968	+		ECD_03721	0.36	+0.5
3,921,007	-		ECD_03721	0.40	-0.1