Strain Fitness in Escherichia coli BL21 around ECD_02695

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02694 and ECD_02695 are separated by 37 nucleotidesECD_02695 and ECD_02696 are separated by 56 nucleotidesECD_02696 and ECD_02697 are separated by 13 nucleotides ECD_02694: ECD_02694 - putative LuxR family transcriptional regulator, at 2,827,265 to 2,827,834 _02694 ECD_02695: ECD_02695 - putative transposase-related protein, at 2,827,872 to 2,828,180 _02695 ECD_02696: ECD_02696 - putative transposase for IS3, at 2,828,237 to 2,829,043 _02696 ECD_02697: ECD_02697 - hypothetical protein, at 2,829,057 to 2,829,608 _02697 Position (kb) 2827 2828 2829Strain fitness (log2 ratio) -3 -2 -1 0 1at 2826.954 kb on - strandat 2826.958 kb on - strandat 2826.958 kb on - strandat 2827.242 kb on - strandat 2827.526 kb on + strand, within ECD_02694at 2827.815 kb on - strandat 2829.058 kb on + strandat 2829.058 kb on + strandat 2829.143 kb on + strand, within ECD_02697at 2829.143 kb on + strand, within ECD_02697at 2829.143 kb on + strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.144 kb on - strand, within ECD_02697at 2829.145 kb on + strand, within ECD_02697

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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2,826,954 - +0.0
2,826,958 - -0.5
2,826,958 - +0.5
2,827,242 - -1.7
2,827,526 + ECD_02694 0.46 -3.0
2,827,815 - -2.3
2,829,058 + -1.2
2,829,058 + -1.1
2,829,143 + ECD_02697 0.16 -0.4
2,829,143 + ECD_02697 0.16 -0.3
2,829,143 + ECD_02697 0.16 +0.5
2,829,144 - ECD_02697 0.16 -0.2
2,829,144 - ECD_02697 0.16 -0.4
2,829,144 - ECD_02697 0.16 -3.1
2,829,144 - ECD_02697 0.16 -1.2
2,829,144 - ECD_02697 0.16 -0.8
2,829,144 - ECD_02697 0.16 +0.8
2,829,145 + ECD_02697 0.16 -2.2

Or see this region's nucleotide sequence