Strain Fitness in Escherichia coli BL21 around ECD_02505

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
2,619,015	+		ECD_02504	0.49	-0.8
2,619,015	+		ECD_02504	0.49	-0.4
2,619,015	+		ECD_02504	0.49	-1.7
2,619,015	+		ECD_02504	0.49	+1.2
2,619,016	-		ECD_02504	0.49	-0.8
2,619,089	+		ECD_02504	0.54	-1.0
2,619,089	+		ECD_02504	0.54	+0.2
2,619,090	-		ECD_02504	0.54	+0.7
2,619,090	-		ECD_02504	0.54	-0.3
2,619,135	+		ECD_02504	0.56	-1.5
2,619,136	-		ECD_02504	0.56	-1.6
2,619,169	+		ECD_02504	0.58	-0.9
2,619,169	+		ECD_02504	0.58	-1.8
2,619,169	+		ECD_02504	0.58	-0.5
2,619,169	+		ECD_02504	0.58	-1.0
2,619,169	+		ECD_02504	0.58	-0.1
2,619,169	+		ECD_02504	0.58	-2.0
2,619,170	-		ECD_02504	0.59	-0.0
2,619,170	-		ECD_02504	0.59	+0.4
2,619,170	-		ECD_02504	0.59	-2.2
2,619,170	-		ECD_02504	0.59	-0.5
2,619,170	-		ECD_02504	0.59	-1.3
2,619,170	-		ECD_02504	0.59	-1.9
2,619,170	-		ECD_02504	0.59	-2.1
2,619,172	+		ECD_02504	0.59	-0.7
2,619,173	-		ECD_02504	0.59	-0.7
2,619,173	-		ECD_02504	0.59	-0.5
2,619,287	+		ECD_02504	0.66	-0.9
2,619,288	-		ECD_02504	0.66	+0.7
2,619,288	-		ECD_02504	0.66	-0.6
2,619,288	-		ECD_02504	0.66	-0.7
2,619,307	+		ECD_02504	0.67	-2.5
2,619,307	+		ECD_02504	0.67	-0.2
2,619,307	+		ECD_02504	0.67	-0.8
2,619,307	+		ECD_02504	0.67	+0.9
2,619,308	-		ECD_02504	0.67	-2.3
2,619,308	-		ECD_02504	0.67	+0.3
2,619,308	-		ECD_02504	0.67	+0.3
2,619,342	+		ECD_02504	0.69	+0.7
2,619,342	+		ECD_02504	0.69	-0.2
2,619,342	+		ECD_02504	0.69	-0.8
2,619,342	+		ECD_02504	0.69	+0.2
2,619,342	+		ECD_02504	0.69	-1.1
2,619,342	+		ECD_02504	0.69	-0.8
2,619,342	+		ECD_02504	0.69	-1.2
2,619,343	-		ECD_02504	0.69	-1.1
2,619,343	-		ECD_02504	0.69	-0.9
2,619,343	-		ECD_02504	0.69	+0.4
2,619,343	-		ECD_02504	0.69	-0.6
2,619,343	-		ECD_02504	0.69	-0.4
2,619,343	-		ECD_02504	0.69	-1.2
2,619,343	-		ECD_02504	0.69	-0.6
2,619,343	-		ECD_02504	0.69	+0.1
2,619,343	-		ECD_02504	0.69	-0.0
2,619,375	+		ECD_02504	0.71	-2.5
2,619,387	+		ECD_02504	0.72	-0.5
2,619,388	-		ECD_02504	0.72	-0.1
2,619,429	+		ECD_02504	0.74	-0.6
2,619,430	-		ECD_02504	0.74	-0.2
2,619,430	-		ECD_02504	0.74	-2.7
2,619,544	-		ECD_02504	0.81	+1.2
2,619,584	+		ECD_02504	0.83	-1.0
2,619,584	+		ECD_02504	0.83	-0.7
2,619,703	+				-1.1
2,619,704	-				-0.7
2,619,704	-				+0.4
2,619,819	+				-0.6
2,619,819	+				-0.6
2,619,819	+				-2.1
2,619,820	-				-0.4
2,619,820	-				-2.2
2,619,820	-				-0.7
2,619,820	-				-3.7
2,619,820	-				+1.1
2,619,820	-				-0.6
2,619,820	-				-0.4
2,619,823	-				-2.4
2,619,823	-				-0.8
2,619,885	+				-1.1
2,619,886	-				-0.1
2,619,925	+				+1.2
2,619,942	+				+0.4
2,619,942	+				-0.4
2,619,942	+				-0.6
2,619,942	+				-0.2
2,619,942	+				+0.4
2,619,942	+				+0.2
2,619,942	+				+0.7
2,619,943	-				-1.4
2,619,945	+				+0.0
2,619,945	+				-0.6
2,619,945	+				+1.5
2,619,946	-				-2.9
2,619,946	-				-1.9
2,619,946	-				-3.1
2,619,956	+				+0.3
2,619,956	+				+0.5
2,619,956	+				-0.5
2,619,956	+				+0.7
2,619,956	+				+0.9
2,619,956	+				+1.1
2,619,956	+				+0.9
2,619,956	+				+0.3
2,619,956	+				+0.5
2,619,959	+				+0.2
2,619,959	+				+1.1
2,619,959	+				+1.1
2,619,960	-				-0.3
2,619,974	+				+0.8
2,619,974	+				+0.9
2,619,974	+				+0.0
2,619,974	+				+0.5
2,619,974	+				+1.4
2,619,974	+				+0.8
2,619,974	+				+1.4
2,619,974	+				+0.5
2,620,006	+				+2.1
2,620,007	-				-0.2
2,620,015	+				+1.3
2,620,015	+				+0.8
2,620,041	+				-0.8
2,620,041	+				+1.8
2,620,044	+		ECD_02505	0.11	+0.6
2,620,044	+		ECD_02505	0.11	+1.3
2,620,044	+		ECD_02505	0.11	+1.1
2,620,044	+		ECD_02505	0.11	+1.4
2,620,044	+		ECD_02505	0.11	+0.6
2,620,044	+		ECD_02505	0.11	+0.5
2,620,044	+		ECD_02505	0.11	+1.1
2,620,044	+		ECD_02505	0.11	+1.4
2,620,044	+		ECD_02505	0.11	+0.9
2,620,044	+		ECD_02505	0.11	+0.7
2,620,044	+		ECD_02505	0.11	+1.8
2,620,044	+		ECD_02505	0.11	+0.9
2,620,044	+		ECD_02505	0.11	+0.7
2,620,045	-		ECD_02505	0.11	-1.4
2,620,115	+		ECD_02505	0.32	+0.0
2,620,115	+		ECD_02505	0.32	+1.2
2,620,115	+		ECD_02505	0.32	+1.2
2,620,115	+		ECD_02505	0.32	+1.2
2,620,116	-		ECD_02505	0.32	+0.9
2,620,116	-		ECD_02505	0.32	-0.3
2,620,134	+		ECD_02505	0.37	+0.8
2,620,143	+		ECD_02505	0.40	-0.2
2,620,143	+		ECD_02505	0.40	+0.6
2,620,143	+		ECD_02505	0.40	+0.6
2,620,143	+		ECD_02505	0.40	+2.3
2,620,143	+		ECD_02505	0.40	+0.4
2,620,143	+		ECD_02505	0.40	+0.8
2,620,144	-		ECD_02505	0.40	+1.6
2,620,176	-		ECD_02505	0.49	-3.2
2,620,186	+		ECD_02505	0.52	+0.7
2,620,214	-		ECD_02505	0.61	-0.8
2,620,219	+		ECD_02505	0.62	+0.9
2,620,219	+		ECD_02505	0.62	+0.7
2,620,219	+		ECD_02505	0.62	+0.6
2,620,220	-		ECD_02505	0.62	-1.7
2,620,220	-		ECD_02505	0.62	-1.0
2,620,229	+		ECD_02505	0.65	+0.6
2,620,229	+		ECD_02505	0.65	+1.1
2,620,229	+		ECD_02505	0.65	+0.9
2,620,229	+		ECD_02505	0.65	+1.1
2,620,229	+		ECD_02505	0.65	+1.2
2,620,229	+		ECD_02505	0.65	+0.9
2,620,229	+		ECD_02505	0.65	+0.6
2,620,229	+		ECD_02505	0.65	+0.3
2,620,229	+		ECD_02505	0.65	+0.8
2,620,229	+		ECD_02505	0.65	+0.3
2,620,229	+		ECD_02505	0.65	+2.0
2,620,229	+		ECD_02505	0.65	+0.2
2,620,229	+		ECD_02505	0.65	+0.9
2,620,229	+		ECD_02505	0.65	+1.4
2,620,229	+		ECD_02505	0.65	+0.9
2,620,229	+		ECD_02505	0.65	+1.3
2,620,229	+		ECD_02505	0.65	+1.6
2,620,229	+		ECD_02505	0.65	+0.7
2,620,229	+		ECD_02505	0.65	+1.0
2,620,229	+		ECD_02505	0.65	+1.3
2,620,229	+		ECD_02505	0.65	+1.2
2,620,230	-		ECD_02505	0.65	-1.6
2,620,230	-		ECD_02505	0.65	-0.4
2,620,230	-		ECD_02505	0.65	-1.9
2,620,230	-		ECD_02505	0.65	-2.1
2,620,230	-		ECD_02505	0.65	-1.3
2,620,263	+		ECD_02505	0.75	+1.2
2,620,263	+		ECD_02505	0.75	+0.4
2,620,263	+		ECD_02505	0.75	+0.9
2,620,263	+		ECD_02505	0.75	+1.6
2,620,263	+		ECD_02505	0.75	+0.7
2,620,263	+		ECD_02505	0.75	+1.1
2,620,263	+		ECD_02505	0.75	+1.6
2,620,263	+		ECD_02505	0.75	+1.7
2,620,316	-				+0.2
2,620,322	-				-2.0
2,620,342	+				+1.6
2,620,346	+				+0.7
2,620,346	+				+0.5
2,620,346	+				+1.2
2,620,346	+				+0.7
2,620,347	-				-1.0
2,620,347	-				-2.5
2,620,349	+				+1.3
2,620,352	+				+1.8
2,620,415	+				-2.2
2,620,416	-				-0.3
2,620,416	-				+0.2
2,620,478	-		ECD_02506	0.23	-0.7
2,620,478	-		ECD_02506	0.23	-0.9
2,620,516	-		ECD_02506	0.36	+0.3
2,620,535	-		ECD_02506	0.43	-0.8
2,620,535	-		ECD_02506	0.43	+0.1
2,620,535	-		ECD_02506	0.43	+0.2
2,620,553	+		ECD_02506	0.49	-1.4
2,620,554	-		ECD_02506	0.49	+0.4
2,620,554	-		ECD_02506	0.49	-0.8
2,620,670	-		ECD_02506	0.89	+1.4
2,620,670	-		ECD_02506	0.89	-0.1
2,620,670	-		ECD_02506	0.89	-0.4
2,620,670	-		ECD_02506	0.89	-1.2
2,620,692	-				+1.0
2,620,692	-				+0.7
2,620,703	+				+1.0
2,620,703	+				-0.1
2,620,703	+				+0.1
2,620,704	-				+0.7
2,620,704	-				+0.6
2,620,740	+		ECD_02507	0.10	+1.2
2,620,741	-		ECD_02507	0.11	+0.8
2,620,791	+		ECD_02507	0.21	-1.6
2,620,908	+		ECD_02507	0.46	-1.2
2,620,909	-		ECD_02507	0.46	-0.5
2,621,158	+				+1.2
2,621,158	+				+0.5
2,621,158	+				+1.1
2,621,158	+				+1.5
2,621,159	-				+1.0
2,621,159	-				+0.7
2,621,159	-				+0.6
2,621,161	+				+0.5
2,621,168	+				+0.1
2,621,179	-				+0.9
2,621,222	+				+0.9
2,621,222	+				+0.6
2,621,222	+				-0.1
2,621,227	+				-0.6
2,621,227	+				+0.1
2,621,297	+				-2.2
2,621,297	+				-1.4
2,621,318	+				-1.2
2,621,318	+				+0.2
2,621,318	+				-1.8