Strain Fitness in Escherichia coli BL21 around ECD_01855

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01854 and ECD_01855 are separated by 2 nucleotidesECD_01855 and ECD_01856 are separated by 18 nucleotides ECD_01854: ECD_01854 - fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA, at 1,913,370 to 1,914,419 _01854 ECD_01855: ECD_01855 - chemotaxis regulator, protein-glutamate methyltransferase, at 1,914,422 to 1,915,282 _01855 ECD_01856: ECD_01856 - methyl-accepting protein IV, at 1,915,301 to 1,916,902 _01856 Position (kb) 1914 1915 1916Strain fitness (log2 ratio) -2 -1 0 1 2at 1913.459 kb on + strandat 1913.640 kb on + strand, within ECD_01854at 1914.006 kb on - strand, within ECD_01854at 1914.065 kb on - strand, within ECD_01854at 1914.891 kb on + strand, within ECD_01855at 1915.194 kb on - strand, within ECD_01855at 1915.248 kb on - strandat 1915.548 kb on - strand, within ECD_01856at 1915.550 kb on - strand, within ECD_01856at 1916.115 kb on - strand, within ECD_01856at 1916.185 kb on - strand, within ECD_01856at 1916.185 kb on - strand, within ECD_01856at 1916.187 kb on - strand, within ECD_01856

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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1,913,459 + -1.1
1,913,640 + ECD_01854 0.26 +2.0
1,914,006 - ECD_01854 0.61 -0.9
1,914,065 - ECD_01854 0.66 -1.1
1,914,891 + ECD_01855 0.54 -0.4
1,915,194 - ECD_01855 0.90 -2.1
1,915,248 - +0.2
1,915,548 - ECD_01856 0.15 -0.7
1,915,550 - ECD_01856 0.16 +0.2
1,916,115 - ECD_01856 0.51 +1.0
1,916,185 - ECD_01856 0.55 -0.4
1,916,185 - ECD_01856 0.55 -0.6
1,916,187 - ECD_01856 0.55 -0.6

Or see this region's nucleotide sequence