Strain Fitness in Escherichia coli BL21 around ECD_01496

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01494 and ECD_01495 are separated by 254 nucleotidesECD_01495 and ECD_01496 are separated by 275 nucleotidesECD_01496 and ECD_01497 are separated by 43 nucleotides ECD_01494: ECD_01494 - diguanylate cyclase, zinc-sensing, at 1,572,256 to 1,573,146 _01494 ECD_01495: ECD_01495 - hydrogen peroxide resistance OB fold protein; putative periplasmic protein, at 1,573,401 to 1,573,793 _01495 ECD_01496: ECD_01496 - inactive PncC family protein, at 1,574,069 to 1,574,587 _01496 ECD_01497: ECD_01497 - dipeptidyl carboxypeptidase II, at 1,574,631 to 1,576,676 _01497 Position (kb) 1574 1575Strain fitness (log2 ratio) -1 0 1 2 3at 1574.172 kb on + strand, within ECD_01496at 1574.584 kb on - strandat 1574.633 kb on - strandat 1574.667 kb on - strandat 1574.724 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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1,574,172 + ECD_01496 0.20 -1.0
1,574,584 - -0.5
1,574,633 - +0.1
1,574,667 - -0.0
1,574,724 - +3.0

Or see this region's nucleotide sequence