Strain Fitness in Escherichia coli BL21 around ECD_01088

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01087 and ECD_01088 are separated by 15 nucleotidesECD_01088 and ECD_01089 are separated by 12 nucleotidesECD_01089 and ECD_01090 are separated by 210 nucleotides ECD_01087: ECD_01087 - 3-oxoacyl-[acyl-carrier-protein] synthase III, at 1,151,326 to 1,152,279 _01087 ECD_01088: ECD_01088 - malonyl-CoA-[acyl-carrier-protein] transacylase, at 1,152,295 to 1,153,224 _01088 ECD_01089: ECD_01089 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 1,153,237 to 1,153,971 _01089 ECD_01090: ECD_01090 - acyl carrier protein (ACP), at 1,154,182 to 1,154,418 _01090 Position (kb) 1152 1153 1154Strain fitness (log2 ratio) -1 0 1 2at 1151.298 kb on + strandat 1151.298 kb on + strandat 1151.298 kb on + strandat 1151.300 kb on + strandat 1151.300 kb on + strandat 1154.027 kb on - strandat 1154.031 kb on - strandat 1154.078 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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1,151,298 + +1.6
1,151,298 + +1.2
1,151,298 + +1.8
1,151,300 + +2.0
1,151,300 + +1.8
1,154,027 - -0.0
1,154,031 - -0.9
1,154,078 + +2.4

Or see this region's nucleotide sequence