Strain Fitness in Escherichia coli BL21 around ECD_00773

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00772 and ECD_00773 are separated by 264 nucleotidesECD_00773 and ECD_00774 are separated by 275 nucleotides ECD_00772: ECD_00772 - catecholate siderophore receptor, at 823,241 to 825,523 _00772 ECD_00773: ECD_00773 - colanic acid mucoidy stimulation protein, at 825,788 to 826,048 _00773 ECD_00774: ECD_00774 - 23S rRNA m(6)A1618 methyltransferase, SAM-dependent, at 826,324 to 827,250 _00774 Position (kb) 825 826 827Strain fitness (log2 ratio) -2 -1 0 1at 824.903 kb on - strand, within ECD_00772at 825.010 kb on + strand, within ECD_00772at 825.133 kb on + strand, within ECD_00772at 825.136 kb on - strand, within ECD_00772at 825.167 kb on - strand, within ECD_00772at 825.168 kb on + strand, within ECD_00772at 825.168 kb on + strand, within ECD_00772at 825.168 kb on + strand, within ECD_00772at 825.168 kb on + strand, within ECD_00772at 825.168 kb on + strand, within ECD_00772at 825.168 kb on + strand, within ECD_00772at 825.169 kb on - strand, within ECD_00772at 825.169 kb on - strand, within ECD_00772at 825.194 kb on - strand, within ECD_00772at 825.410 kb on - strandat 825.458 kb on - strandat 825.546 kb on - strandat 825.705 kb on - strandat 825.987 kb on + strand, within ECD_00773at 826.029 kb on - strandat 826.067 kb on - strandat 826.220 kb on + strandat 826.269 kb on - strandat 826.323 kb on + strandat 826.672 kb on - strand, within ECD_00774at 826.699 kb on + strand, within ECD_00774

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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824,903 - ECD_00772 0.73 -1.5
825,010 + ECD_00772 0.77 +0.8
825,133 + ECD_00772 0.83 -0.9
825,136 - ECD_00772 0.83 -0.4
825,167 - ECD_00772 0.84 -2.5
825,168 + ECD_00772 0.84 +1.0
825,168 + ECD_00772 0.84 -1.3
825,168 + ECD_00772 0.84 -0.2
825,168 + ECD_00772 0.84 -0.3
825,168 + ECD_00772 0.84 -0.2
825,168 + ECD_00772 0.84 -0.6
825,169 - ECD_00772 0.84 -1.9
825,169 - ECD_00772 0.84 -1.2
825,194 - ECD_00772 0.86 -1.2
825,410 - -1.8
825,458 - +0.9
825,546 - +0.2
825,705 - -1.1
825,987 + ECD_00773 0.76 +0.1
826,029 - -1.0
826,067 - +0.5
826,220 + -1.0
826,269 - -0.2
826,323 + -0.5
826,672 - ECD_00774 0.38 -0.9
826,699 + ECD_00774 0.40 +0.5

Or see this region's nucleotide sequence