Strain Fitness in Escherichia coli BL21 around ECD_00755

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00753 and ECD_00754 are separated by 204 nucleotidesECD_00754 and ECD_00755 are separated by 35 nucleotidesECD_00755 and ECD_00756 overlap by 1 nucleotides ECD_00753: ECD_00753 - putative acetate transporter; BAX Inhibitor-1 family inner membrane protein, at 803,876 to 804,580 _00753 ECD_00754: ECD_00754 - BAX Inhibitor-1 family inner membrane protein, at 804,785 to 805,498 _00754 ECD_00755: ECD_00755 - UPF0104 family inner membrane protein, at 805,534 to 806,490 _00755 ECD_00756: ECD_00756 - cardiolipin synthase 2, at 806,490 to 807,731 _00756 Position (kb) 805 806 807Strain fitness (log2 ratio) -3 -2 -1 0 1at 804.907 kb on + strand, within ECD_00754at 805.512 kb on + strandat 805.512 kb on + strandat 805.524 kb on + strandat 805.677 kb on + strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.759 kb on - strand, within ECD_00755at 805.793 kb on + strand, within ECD_00755at 805.793 kb on + strand, within ECD_00755at 805.996 kb on - strand, within ECD_00755at 806.097 kb on + strand, within ECD_00755at 806.097 kb on + strand, within ECD_00755at 806.307 kb on - strand, within ECD_00755at 806.403 kb on - strandat 806.814 kb on - strand, within ECD_00756at 806.854 kb on - strand, within ECD_00756at 806.915 kb on - strand, within ECD_00756at 806.915 kb on - strand, within ECD_00756at 806.918 kb on + strand, within ECD_00756at 806.918 kb on + strand, within ECD_00756at 806.918 kb on + strand, within ECD_00756at 806.919 kb on - strand, within ECD_00756at 806.919 kb on - strand, within ECD_00756at 806.921 kb on - strand, within ECD_00756at 806.921 kb on - strand, within ECD_00756at 807.257 kb on + strand, within ECD_00756at 807.326 kb on + strand, within ECD_00756at 807.326 kb on + strand, within ECD_00756at 807.327 kb on - strand, within ECD_00756at 807.327 kb on - strand, within ECD_00756at 807.452 kb on - strand, within ECD_00756

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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804,907 + ECD_00754 0.17 +0.6
805,512 + -1.3
805,512 + -1.6
805,524 + -0.8
805,677 + ECD_00755 0.15 -1.4
805,678 - ECD_00755 0.15 -2.7
805,678 - ECD_00755 0.15 +0.3
805,678 - ECD_00755 0.15 -1.3
805,678 - ECD_00755 0.15 -2.0
805,678 - ECD_00755 0.15 -3.5
805,759 - ECD_00755 0.24 -1.3
805,793 + ECD_00755 0.27 -0.6
805,793 + ECD_00755 0.27 -1.2
805,996 - ECD_00755 0.48 +0.2
806,097 + ECD_00755 0.59 -0.5
806,097 + ECD_00755 0.59 -1.1
806,307 - ECD_00755 0.81 -1.3
806,403 - +0.2
806,814 - ECD_00756 0.26 +0.1
806,854 - ECD_00756 0.29 -0.6
806,915 - ECD_00756 0.34 -1.2
806,915 - ECD_00756 0.34 +0.7
806,918 + ECD_00756 0.34 -1.5
806,918 + ECD_00756 0.34 -1.4
806,918 + ECD_00756 0.34 -1.9
806,919 - ECD_00756 0.35 -0.3
806,919 - ECD_00756 0.35 -0.4
806,921 - ECD_00756 0.35 -0.8
806,921 - ECD_00756 0.35 -0.8
807,257 + ECD_00756 0.62 +0.4
807,326 + ECD_00756 0.67 -1.8
807,326 + ECD_00756 0.67 -0.7
807,327 - ECD_00756 0.67 +0.1
807,327 - ECD_00756 0.67 -1.3
807,452 - ECD_00756 0.77 -1.0

Or see this region's nucleotide sequence