Strain Fitness in Escherichia coli BL21 around ECD_00258

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00257 and ECD_00258 are separated by 590 nucleotidesECD_00258 and ECD_00259 are separated by 11 nucleotidesECD_00259 and ECD_00260 are separated by 108 nucleotides ECD_00257: ECD_00257 - putative DNA-binding transcriptional regulator, at 285,912 to 286,763 _00257 ECD_00258: ECD_00258 - reactive chlorine species (RCS) stress resistance inner membrane protein, at 287,354 to 287,947 _00258 ECD_00259: ECD_00259 - reactive chlorine species (RCS) stress resistance periplasmic protein, at 287,959 to 288,195 _00259 ECD_00260: ECD_00260 - reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family, at 288,304 to 289,629 _00260 Position (kb) 287 288Strain fitness (log2 ratio) -2 -1 0 1at 286.889 kb on - strandat 288.377 kb on - strandat 288.465 kb on + strand, within ECD_00260at 288.630 kb on + strand, within ECD_00260at 288.635 kb on - strand, within ECD_00260at 288.791 kb on - strand, within ECD_00260at 288.889 kb on + strand, within ECD_00260

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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286,889 - -1.6
288,377 - -0.3
288,465 + ECD_00260 0.12 -2.1
288,630 + ECD_00260 0.25 -1.0
288,635 - ECD_00260 0.25 -2.7
288,791 - ECD_00260 0.37 -1.1
288,889 + ECD_00260 0.44 -1.3

Or see this region's nucleotide sequence