Strain Fitness in Agrobacterium fabrum C58 around Atu3602
Experiment: R2A with Manganese (II) chloride tetrahydrate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Manganese (II) chloride tetrahydrate 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 656,100 | + | +0.2 | |||
| 656,160 | - | -0.7 | |||
| 656,160 | - | -0.8 | |||
| 656,182 | - | +0.2 | |||
| 656,233 | + | -0.4 | |||
| 656,241 | - | -0.4 | |||
| 659,120 | + | +0.1 | |||
| 659,381 | + | -0.1 | |||
| 659,386 | + | -0.2 | |||
| 659,391 | + | +0.7 | |||
| 659,399 | - | +0.6 | |||
| 659,406 | - | +1.2 | |||
| 659,457 | - | +0.3 | |||
| 659,459 | + | -0.5 | |||
| 659,499 | + | +1.4 | |||
| 659,518 | + | Atu3603 | 0.12 | +1.2 | |
| 659,581 | + | Atu3603 | 0.30 | +1.6 | |
| 659,589 | - | Atu3603 | 0.32 | +0.1 | |
| 659,752 | + | Atu3603 | 0.77 | +1.6 | |
| 659,875 | + | +0.5 | |||
| 659,928 | - | -0.0 | |||
| 659,958 | - | +0.3 |
Or see this region's nucleotide sequence