Strain Fitness in Agrobacterium fabrum C58 around Atu3087

Experiment: R2A with Manganese (II) chloride tetrahydrate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Manganese (II) chloride tetrahydrate 5 mM
91,554	+				+1.0
91,623	-				-0.5
91,640	-				-0.5
91,758	-		Atu3086	0.20	-0.1
91,785	+		Atu3086	0.23	-0.7
91,785	-		Atu3086	0.23	+0.2
91,797	+		Atu3086	0.25	-0.4
91,830	-		Atu3086	0.29	+0.5
91,865	-		Atu3086	0.33	+0.2
91,922	+		Atu3086	0.40	+0.2
92,015	-		Atu3086	0.51	-0.3
92,130	-		Atu3086	0.65	+0.9
92,252	-		Atu3086	0.80	+0.8
92,262	-		Atu3086	0.82	+0.0
92,332	-				+0.4
92,355	-				-2.4
92,414	+				+0.2
92,414	+				+0.0
92,422	-				+1.0
92,422	-				-0.1
92,431	+				+2.0
92,439	-				+0.0
92,469	-				-0.3
92,479	+				+0.0
92,484	+				-0.1
92,484	+				+0.3
92,581	-		Atu3087	0.18	-0.3
92,598	-		Atu3087	0.20	-0.4
92,676	+		Atu3087	0.29	-0.2
92,762	+		Atu3087	0.38	-0.2
92,762	+		Atu3087	0.38	+1.0
92,770	-		Atu3087	0.39	-0.5
92,774	+		Atu3087	0.39	+0.1
92,791	+		Atu3087	0.41	-0.1
92,799	-		Atu3087	0.42	+0.5
92,813	+		Atu3087	0.44	-0.6
92,867	+		Atu3087	0.49	-1.0
92,875	-		Atu3087	0.50	-0.6
92,953	-		Atu3087	0.59	+0.1
92,964	-		Atu3087	0.60	-0.8
93,020	+		Atu3087	0.66	+0.5
93,020	+		Atu3087	0.66	+0.7
93,020	+		Atu3087	0.66	-0.7
93,020	+		Atu3087	0.66	+0.7
93,020	+		Atu3087	0.66	-0.3
93,020	+		Atu3087	0.66	-1.5
93,020	+		Atu3087	0.66	-2.1
93,028	-		Atu3087	0.67	-2.0
93,083	-		Atu3087	0.73	-0.2
93,090	+		Atu3087	0.74	-0.3
93,090	+		Atu3087	0.74	-0.7
93,115	+		Atu3087	0.77	-0.5
93,139	+		Atu3087	0.79	-0.2
93,244	+				-1.5
93,272	-				-0.3
93,312	+				-0.1
93,312	+				+0.1
93,332	-				+0.7
93,376	+				-1.2
93,444	-				-0.3
93,484	-				-0.4
93,500	+				+0.6
93,508	-				+0.6
93,516	-				+0.3
93,599	+				-0.2
93,662	-				-0.4
93,737	-		Atu3088	0.13	-0.8
93,742	-		Atu3088	0.14	-0.4
93,757	-		Atu3088	0.15	-0.3
93,790	+		Atu3088	0.17	+2.7
93,848	-		Atu3088	0.22	-0.5
93,875	+		Atu3088	0.24	+0.5
93,898	-		Atu3088	0.26	-0.4
93,909	+		Atu3088	0.27	-0.3
93,910	+		Atu3088	0.27	+0.3
93,917	-		Atu3088	0.27	+0.6
93,918	-		Atu3088	0.27	-0.4
93,931	+		Atu3088	0.28	-0.8
94,071	-		Atu3088	0.39	-0.2
94,081	-		Atu3088	0.40	+0.3
94,097	+		Atu3088	0.41	+0.1
94,296	+		Atu3088	0.57	-0.9