Strain Fitness in Agrobacterium fabrum C58 around Atu2387

Experiment: R2A with Manganese (II) chloride tetrahydrate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Manganese (II) chloride tetrahydrate 5 mM
2,357,012	-		Atu2386	0.32	+0.3
2,357,062	+		Atu2386	0.35	-0.0
2,357,062	+		Atu2386	0.35	-0.2
2,357,070	-		Atu2386	0.36	-0.3
2,357,070	-		Atu2386	0.36	+0.3
2,357,070	-		Atu2386	0.36	+0.2
2,357,152	-		Atu2386	0.41	-0.8
2,357,202	+		Atu2386	0.45	+0.0
2,357,246	+		Atu2386	0.48	-0.0
2,357,254	-		Atu2386	0.48	-0.3
2,357,364	+		Atu2386	0.56	-0.6
2,357,433	+		Atu2386	0.60	+0.1
2,357,433	+		Atu2386	0.60	-0.1
2,357,441	-		Atu2386	0.61	-0.4
2,357,454	+		Atu2386	0.62	+0.3
2,357,535	-		Atu2386	0.67	+0.4
2,357,547	+		Atu2386	0.68	+0.2
2,357,583	+		Atu2386	0.71	-0.1
2,357,588	+		Atu2386	0.71	-0.6
2,357,596	-		Atu2386	0.72	-0.1
2,357,596	-		Atu2386	0.72	+0.2
2,357,752	-		Atu2386	0.82	-0.2
2,357,810	+		Atu2386	0.86	+1.1
2,357,810	+		Atu2386	0.86	+1.0
2,357,978	+				-0.3
2,358,008	+				+1.0
2,358,078	+		Atu2387	0.15	-0.1
2,358,078	+		Atu2387	0.15	+0.3
2,358,078	+		Atu2387	0.15	-0.6
2,358,080	+		Atu2387	0.16	+0.1
2,358,086	-		Atu2387	0.17	-0.1
2,358,107	-		Atu2387	0.22	+0.8
2,358,246	+		Atu2387	0.54	-0.1
2,358,345	+		Atu2387	0.76	+0.9
2,358,448	+				+0.3
2,358,448	+				+0.6
2,358,456	-				+0.5
2,358,489	+				+0.2
2,358,520	+				-0.3
2,358,605	+		Atu2388	0.20	-0.2
2,358,615	+		Atu2388	0.21	-0.3
2,358,623	-		Atu2388	0.22	-0.2
2,358,748	+		Atu2388	0.38	-0.5
2,358,789	-		Atu2388	0.43	+1.6
2,358,791	+		Atu2388	0.44	+0.3
2,358,799	-		Atu2388	0.45	+0.2
2,358,829	-		Atu2388	0.48	-0.8
2,358,898	+		Atu2388	0.57	+0.6
2,359,111	-		Atu2388	0.84	+0.0
2,359,215	-				+0.9
2,359,219	+				-0.1
2,359,219	+				-0.5
2,359,234	+				-0.4
2,359,242	-				+0.7
2,359,269	-				-0.4
2,359,269	-				-0.1
2,359,296	-				+1.2
2,359,319	+				+0.4
2,359,361	+				+0.6
2,359,383	-				-1.3
2,359,398	+				+0.6
2,359,398	+				+0.2
2,359,398	+				+0.4
2,359,406	-				+0.2
2,359,428	-				-0.6
2,359,428	-				-0.5
2,359,428	-				-0.0
2,359,428	-				+0.2