Strain Fitness in Agrobacterium fabrum C58 around Atu1599

Experiment: R2A with Manganese (II) chloride tetrahydrate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Manganese (II) chloride tetrahydrate 5 mM
1,580,912	+				-0.3
1,580,944	+				-0.4
1,580,985	+				+0.8
1,580,993	-				+0.4
1,581,882	+				-0.7
1,581,968	-				-0.4
1,582,018	+				+1.3
1,582,044	+				+1.3
1,582,133	+		Atu1601	0.12	+1.3
1,582,140	-		Atu1601	0.12	+0.5
1,582,263	-		Atu1601	0.21	+1.3
1,582,290	-		Atu1601	0.23	+0.5
1,582,331	-		Atu1601	0.26	+1.3
1,582,331	-		Atu1601	0.26	+1.0
1,582,331	-		Atu1601	0.26	+1.6
1,582,343	-		Atu1601	0.27	+1.3
1,582,364	+		Atu1601	0.29	+1.0
1,582,369	+		Atu1601	0.29	+0.9
1,582,396	+		Atu1601	0.31	+0.6
1,582,445	+		Atu1601	0.35	+0.7
1,582,445	+		Atu1601	0.35	+2.4
1,582,453	-		Atu1601	0.35	+0.6
1,582,453	-		Atu1601	0.35	+0.5