Strain Fitness in Agrobacterium fabrum C58 around Atu1062
Experiment: R2A with Manganese (II) chloride tetrahydrate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Manganese (II) chloride tetrahydrate 5 mM |
---|---|---|---|---|---|
remove | |||||
1,051,359 | + | Atu1060 | 0.87 | +0.5 | |
1,051,410 | + | +1.8 | |||
1,051,411 | + | +0.5 | |||
1,051,476 | - | -1.7 | |||
1,051,487 | + | +0.9 | |||
1,051,541 | + | +0.3 | |||
1,051,579 | - | -1.4 | |||
1,051,643 | + | -0.1 | |||
1,051,688 | + | Atu1061 | 0.10 | -1.4 | |
1,051,952 | + | +0.1 | |||
1,052,083 | - | +0.5 | |||
1,052,106 | + | -0.2 | |||
1,052,282 | + | +0.2 | |||
1,052,287 | + | +0.2 | |||
1,052,307 | - | Atu1062 | 0.10 | +0.0 | |
1,054,077 | + | -0.5 |
Or see this region's nucleotide sequence