Strain Fitness in Escherichia coli BW25113 around b3035

Experiment: limonene 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	limonene 5 vol%
3,175,171	-	yqiB	b3033	0.69	+1.7
3,175,226	+	yqiB	b3033	0.82	-1.3
3,175,399	-	nudF	b3034	0.15	+2.2
3,175,469	-	nudF	b3034	0.26	+1.6
3,175,494	-	nudF	b3034	0.30	+0.9
3,175,494	-	nudF	b3034	0.30	+2.0
3,175,528	-	nudF	b3034	0.36	+3.1
3,175,577	+	nudF	b3034	0.43	-0.2
3,175,585	+	nudF	b3034	0.45	-0.2
3,175,590	-	nudF	b3034	0.46	+2.1
3,175,662	+	nudF	b3034	0.57	+0.4
3,175,679	+	nudF	b3034	0.60	+0.5
3,175,679	+	nudF	b3034	0.60	+0.6
3,175,752	-	nudF	b3034	0.71	+1.4
3,175,798	+	nudF	b3034	0.79	+0.7
3,175,818	-	nudF	b3034	0.82	+0.8
3,175,823	-	nudF	b3034	0.83	+1.4
3,175,871	-				+1.5
3,176,030	-				+0.1
3,176,031	+				-1.0
3,176,119	-				-2.4
3,176,119	-				+2.0
3,176,173	-				-3.3
3,176,173	-				-2.5
3,176,174	+				-2.6
3,176,182	-				+0.0
3,176,208	-				-1.7
3,176,271	+				-3.4
3,176,271	+				-2.8
3,176,304	+	tolC	b3035	0.11	-1.9
3,176,309	+	tolC	b3035	0.12	-1.9
3,176,309	+	tolC	b3035	0.12	-1.8
3,176,349	-	tolC	b3035	0.14	-1.2
3,176,378	+	tolC	b3035	0.16	-2.9
3,176,493	+	tolC	b3035	0.24	-0.2
3,176,526	-	tolC	b3035	0.26	-2.9
3,176,571	+	tolC	b3035	0.29	-1.8
3,176,573	+	tolC	b3035	0.29	-1.9
3,176,581	-	tolC	b3035	0.30	-0.1
3,176,635	+	tolC	b3035	0.34	-1.5
3,176,638	-	tolC	b3035	0.34	-0.8
3,176,654	-	tolC	b3035	0.35	-2.4
3,176,680	-	tolC	b3035	0.37	-1.3
3,176,680	-	tolC	b3035	0.37	-1.3
3,176,682	+	tolC	b3035	0.37	-1.6
3,176,692	-	tolC	b3035	0.37	-3.8
3,176,716	+	tolC	b3035	0.39	-2.2
3,176,716	+	tolC	b3035	0.39	-1.8
3,176,844	-	tolC	b3035	0.48	-0.3
3,176,844	-	tolC	b3035	0.48	-1.0
3,176,869	-	tolC	b3035	0.49	-2.0
3,176,869	-	tolC	b3035	0.49	-1.9
3,176,887	+	tolC	b3035	0.51	-2.2
3,176,887	+	tolC	b3035	0.51	-2.1
3,176,887	+	tolC	b3035	0.51	-3.7
3,176,932	+	tolC	b3035	0.54	-2.8
3,176,934	+	tolC	b3035	0.54	-1.5
3,176,942	-	tolC	b3035	0.54	-3.9
3,176,979	-	tolC	b3035	0.57	-1.2
3,176,979	-	tolC	b3035	0.57	+0.4
3,176,981	+	tolC	b3035	0.57	-3.6
3,176,981	+	tolC	b3035	0.57	-0.3
3,176,988	-	tolC	b3035	0.57	-2.2
3,177,093	+	tolC	b3035	0.65	-3.1
3,177,105	+	tolC	b3035	0.65	-2.6
3,177,113	-	tolC	b3035	0.66	-0.9
3,177,120	+	tolC	b3035	0.66	-3.2
3,177,339	+	tolC	b3035	0.81	-0.7
3,177,339	+	tolC	b3035	0.81	-0.6
3,177,437	+	tolC	b3035	0.88	-3.2
3,177,488	+				-1.2
3,177,516	-				-1.8
3,177,517	+				-1.4
3,177,517	+				-2.6
3,177,717	+				+0.3
3,177,737	+				+0.1
3,177,747	-				-1.1
3,177,964	+	ygiB	b3037	0.29	-1.3
3,177,964	+	ygiB	b3037	0.29	-0.3
3,177,964	+	ygiB	b3037	0.29	+0.8
3,177,964	-	ygiB	b3037	0.29	+0.1
3,178,163	+	ygiB	b3037	0.59	+0.4
3,178,238	+	ygiB	b3037	0.70	+0.8
3,178,238	+	ygiB	b3037	0.70	-0.2
3,178,276	+	ygiB	b3037	0.76	+1.3
3,178,276	+	ygiB	b3037	0.76	+0.4
3,178,294	-	ygiB	b3037	0.79	-0.3
3,178,298	-	ygiB	b3037	0.79	+0.1
3,178,298	-	ygiB	b3037	0.79	+0.0
3,178,390	+				-0.3
3,178,390	+				-2.2
3,178,398	-				-0.3
3,178,423	-				-0.9
3,178,454	+				-0.4
3,178,540	-				+0.3
3,178,542	+				+0.2
3,178,545	-				-0.7
3,178,546	-				+0.3
3,178,546	-				+0.3