Strain Fitness in Pseudomonas putida KT2440 around PP_2634

Experiment: Geraniol 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Geraniol 1 vol%
3,012,024	-				-1.2
3,012,055	+		PP_2632	0.69	-0.5
3,012,093	-		PP_2632	0.71	-1.1
3,012,093	-		PP_2632	0.71	-0.3
3,012,168	+		PP_2632	0.76	+1.6
3,012,168	+		PP_2632	0.76	+1.2
3,012,260	-		PP_2632	0.82	+0.6
3,012,344	+		PP_2632	0.87	-0.4
3,012,345	-		PP_2632	0.87	-0.7
3,012,377	+		PP_2632	0.89	+0.1
3,012,582	+		PP_2633	0.15	+2.2
3,012,634	+		PP_2633	0.38	-0.1
3,012,982	-		PP_2634	0.31	-0.8
3,013,113	+		PP_2634	0.49	-0.9
3,013,113	+		PP_2634	0.49	-0.5
3,013,113	+		PP_2634	0.49	+0.7
3,013,168	+		PP_2634	0.57	-2.0
3,013,260	+		PP_2634	0.70	-1.6
3,013,377	+		PP_2634	0.86	-1.2
3,013,378	-		PP_2634	0.87	-0.0
3,013,398	+		PP_2634	0.89	-1.4
3,013,495	+				-0.4
3,013,496	-				-0.3
3,013,496	-				-0.3
3,013,496	-				+0.6
3,013,726	+				+0.5
3,013,802	+		PP_2635	0.13	+0.2
3,013,922	+		PP_2635	0.17	+0.2
3,013,922	+		PP_2635	0.17	-1.0
3,013,938	+		PP_2635	0.18	+0.6
3,014,093	-		PP_2635	0.24	-1.2
3,014,106	-		PP_2635	0.24	-0.5
3,014,121	-		PP_2635	0.25	-0.0
3,014,161	-		PP_2635	0.27	-0.8
3,014,192	+		PP_2635	0.28	+1.4
3,014,192	+		PP_2635	0.28	+1.4
3,014,220	-		PP_2635	0.29	+1.5
3,014,393	+				+3.6
3,014,394	-		PP_2635	0.35	+0.6
3,014,394	-		PP_2635	0.35	-0.0
3,014,394	-		PP_2635	0.35	-0.4
3,014,456	+		PP_2635	0.38	-0.0
3,014,456	+		PP_2635	0.38	+0.7
3,014,457	-		PP_2635	0.38	+0.8
3,014,457	-		PP_2635	0.38	-0.6
3,014,457	-		PP_2635	0.38	-0.3
3,014,457	-		PP_2635	0.38	-0.9
3,014,457	-		PP_2635	0.38	-0.1
3,014,457	-		PP_2635	0.38	-0.3
3,014,457	-		PP_2635	0.38	-0.4
3,014,457	-		PP_2635	0.38	-0.0
3,014,459	-		PP_2635	0.38	+0.5
3,014,459	-		PP_2635	0.38	-0.8