Strain Fitness in Pseudomonas putida KT2440 around PP_2269

Experiment: Geraniol 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Geraniol 1 vol%
2,590,184	-		PP_2267	0.34	+0.2
2,590,184	-		PP_2267	0.34	-0.9
2,590,407	+		PP_2267	0.67	+0.1
2,590,408	-		PP_2267	0.67	+0.9
2,590,408	-		PP_2267	0.67	-0.7
2,590,408	-		PP_2267	0.67	+0.5
2,590,618	-				-0.1
2,590,669	+				+0.3
2,590,759	+		PP_2268	0.24	+2.6
2,591,080	+				+1.0
2,591,128	-				+0.0
2,591,296	+		PP_2269	0.47	-1.1
2,591,297	-		PP_2269	0.47	-0.7
2,591,297	-		PP_2269	0.47	-1.9
2,591,306	+		PP_2269	0.49	-0.8
2,591,307	-		PP_2269	0.49	-0.2
2,591,307	-		PP_2269	0.49	-1.1
2,591,508	-				-1.1
2,591,531	-				-0.1
2,591,912	+				-0.1
2,591,913	-				+2.6
2,592,087	+		PP_2270	0.19	-0.7
2,592,087	+		PP_2270	0.19	-0.5
2,592,087	+		PP_2270	0.19	+0.5
2,592,088	-		PP_2270	0.19	-1.9
2,592,088	-		PP_2270	0.19	-0.1
2,592,266	+		PP_2270	0.32	-1.4
2,592,266	+		PP_2270	0.32	-0.8
2,592,267	-		PP_2270	0.32	+0.5
2,592,299	+		PP_2270	0.34	-0.1
2,592,379	+		PP_2270	0.39	-0.8
2,592,395	+		PP_2270	0.41	-0.5
2,592,395	+		PP_2270	0.41	+0.3
2,592,396	-		PP_2270	0.41	+0.4
2,592,396	-		PP_2270	0.41	+1.2
2,592,396	-		PP_2270	0.41	-1.2
2,592,497	-		PP_2270	0.48	+0.6
2,592,525	+		PP_2270	0.50	-0.5
2,592,525	+		PP_2270	0.50	+1.6
2,592,525	+		PP_2270	0.50	+0.3
2,592,526	-		PP_2270	0.50	+0.3