Strain Fitness in Pseudomonas putida KT2440 around PP_1422

Experiment: Geraniol 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Geraniol 1 vol%
1,622,226	+		PP_1421	0.82	+0.6
1,622,226	+		PP_1421	0.82	+0.5
1,622,227	-		PP_1421	0.82	+0.5
1,622,301	+		PP_1421	0.87	+0.4
1,622,341	+				-0.2
1,622,341	+				+0.3
1,622,467	-				+0.5
1,622,539	-				+0.2
1,622,696	-		PP_1422	0.19	+1.5
1,622,821	+		PP_1422	0.34	+1.4
1,622,821	+		PP_1422	0.34	+1.4
1,622,821	+		PP_1422	0.34	+1.5
1,622,822	-		PP_1422	0.34	+0.7
1,622,869	+		PP_1422	0.40	+0.7
1,622,869	+		PP_1422	0.40	+0.9
1,622,869	+		PP_1422	0.40	+2.4
1,622,869	+		PP_1422	0.40	+1.4
1,622,869	+		PP_1422	0.40	+0.6
1,622,870	-		PP_1422	0.40	+0.8
1,622,877	+		PP_1422	0.41	+1.7
1,623,082	+		PP_1422	0.66	+1.3
1,623,220	-		PP_1422	0.83	+1.2
1,623,360	+				+2.4
1,623,360	+				+1.6
1,623,441	-				-1.3
1,623,441	-				+0.0