Strain Fitness in Escherichia coli BL21 around ECD_03718

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
3,916,792	+				-1.5
3,916,792	+				-0.3
3,916,792	+				+0.1
3,916,793	-				+0.0
3,916,793	-				-0.4
3,916,793	-				-0.5
3,916,793	-				+0.4
3,916,793	-				-0.5
3,916,793	-				-0.6
3,916,930	+		ECD_03717	0.26	+0.1
3,916,930	+		ECD_03717	0.26	-0.2
3,916,930	+		ECD_03717	0.26	-0.2
3,916,931	-		ECD_03717	0.26	-0.6
3,916,932	+		ECD_03717	0.26	+0.3
3,916,932	+		ECD_03717	0.26	-0.2
3,916,932	+		ECD_03717	0.26	-0.3
3,916,932	+		ECD_03717	0.26	+0.0
3,916,933	-		ECD_03717	0.26	+0.5
3,916,933	-		ECD_03717	0.26	+0.4
3,917,001	-		ECD_03717	0.35	-1.0
3,917,040	+		ECD_03717	0.40	-0.7
3,917,040	+		ECD_03717	0.40	-0.1
3,917,040	+		ECD_03717	0.40	-0.3
3,917,041	-		ECD_03717	0.40	+0.5
3,917,062	+		ECD_03717	0.42	-1.1
3,917,075	+		ECD_03717	0.44	-0.5
3,917,075	+		ECD_03717	0.44	-0.3
3,917,076	-		ECD_03717	0.44	+0.5
3,917,076	-		ECD_03717	0.44	-0.6
3,917,106	+		ECD_03717	0.48	+0.2
3,917,107	-		ECD_03717	0.48	+1.0
3,917,254	+		ECD_03717	0.66	-0.1
3,917,254	+		ECD_03717	0.66	-0.4
3,917,316	-		ECD_03717	0.74	-0.0
3,917,346	+		ECD_03717	0.77	+0.7
3,917,346	+		ECD_03717	0.77	+0.0
3,917,347	-		ECD_03717	0.78	+0.0
3,917,531	+				-0.1
3,917,532	-				+0.0
3,917,532	-				+0.7
3,917,532	-				+0.1
3,917,548	+				-0.3
3,917,567	+				-1.1
3,917,567	+				-0.5
3,917,567	+				-0.5
3,917,568	-				-1.2
3,917,568	-				+0.1
3,917,571	+				+0.4
3,917,571	+				+0.2
3,917,571	+				-0.3
3,917,571	+				-0.1
3,917,571	+				+0.5
3,917,572	-				+0.1
3,917,572	-				-0.2
3,917,572	-				-0.5
3,917,572	-				-0.4
3,917,572	-				-1.1
3,917,573	+				-0.2
3,917,573	+				-0.1
3,917,648	-				-0.9
3,917,648	-				-0.7
3,917,648	-				-0.3
3,917,648	-				-0.5
3,917,710	+				+1.4
3,917,711	-				-0.4
3,917,711	-				+0.1
3,917,787	+				-0.5
3,917,787	+				-0.3
3,917,787	+				-0.2
3,917,787	+				-0.3
3,917,787	+				-1.0
3,917,787	+				-0.3
3,917,787	+				-0.1
3,917,788	-				-1.0
3,917,788	-				-0.9
3,917,788	-				-0.3
3,917,788	-				-0.7
3,917,788	-				-0.7
3,917,788	-				-1.1
3,917,788	-				-0.0
3,917,788	-				-0.2
3,917,788	-				-0.8
3,917,788	-				-0.0
3,917,788	-				-1.1
3,917,788	-				-1.0
3,917,788	-				-0.2
3,917,788	-				-0.4
3,917,788	-				-1.2
3,917,788	-				-0.5
3,917,789	+				-0.4
3,917,789	+				-1.5
3,917,789	+				-0.2
3,917,789	+				+0.4
3,917,790	-				-0.7
3,917,790	-				-0.5
3,917,790	-				-0.0
3,917,790	-				-0.5
3,917,790	-				-0.9
3,917,825	+				-0.5
3,917,846	+				-0.1
3,917,846	+				-0.1
3,917,966	+		ECD_03718	0.23	-0.1
3,917,966	+		ECD_03718	0.23	+0.2
3,917,966	+		ECD_03718	0.23	-0.5
3,918,008	+		ECD_03718	0.28	-0.0
3,918,008	+		ECD_03718	0.28	-0.2
3,918,009	-		ECD_03718	0.29	-0.3
3,918,015	-		ECD_03718	0.29	-1.1
3,918,015	-		ECD_03718	0.29	-0.6
3,918,015	-		ECD_03718	0.29	-0.4
3,918,092	+		ECD_03718	0.39	-0.1
3,918,093	-		ECD_03718	0.40	-0.4
3,918,095	+		ECD_03718	0.40	-0.4
3,918,095	+		ECD_03718	0.40	+0.2
3,918,096	-		ECD_03718	0.40	-0.0
3,918,197	+		ECD_03718	0.53	-0.2
3,918,198	-		ECD_03718	0.53	+0.6
3,918,269	+		ECD_03718	0.63	-0.3
3,918,270	-		ECD_03718	0.63	+0.3
3,918,276	+		ECD_03718	0.64	-0.2
3,918,276	+		ECD_03718	0.64	+0.1
3,918,277	-		ECD_03718	0.64	-1.4
3,918,299	+		ECD_03718	0.67	-0.4
3,918,300	-		ECD_03718	0.67	-0.2
3,918,300	-		ECD_03718	0.67	-0.8
3,918,303	+		ECD_03718	0.67	-0.4
3,918,304	-		ECD_03718	0.67	-0.5
3,918,304	-		ECD_03718	0.67	-0.1
3,918,304	-		ECD_03718	0.67	-0.8
3,918,330	-		ECD_03718	0.71	+0.2
3,918,330	-		ECD_03718	0.71	+0.3
3,918,338	+		ECD_03718	0.72	-0.8
3,918,338	+		ECD_03718	0.72	+0.0
3,918,338	+		ECD_03718	0.72	-0.4
3,918,338	+		ECD_03718	0.72	+0.2
3,918,339	-		ECD_03718	0.72	-0.8
3,918,339	-		ECD_03718	0.72	-1.3
3,918,339	-		ECD_03718	0.72	-0.7
3,918,372	+		ECD_03718	0.76	-0.5
3,918,372	+		ECD_03718	0.76	-0.2
3,918,372	+		ECD_03718	0.76	-0.5
3,918,373	-		ECD_03718	0.76	-0.9
3,918,373	-		ECD_03718	0.76	-0.9
3,918,432	-		ECD_03718	0.84	+0.0
3,918,589	+				-0.2
3,918,590	-				-0.3
3,918,590	-				-0.5
3,918,610	-				+0.7
3,918,639	-				-0.2
3,918,731	+				-0.5
3,918,831	-		ECD_03719	0.16	+0.2
3,918,865	+		ECD_03719	0.19	-0.7
3,918,865	+		ECD_03719	0.19	-1.0
3,918,866	-		ECD_03719	0.19	+0.4
3,918,908	+		ECD_03719	0.21	-0.5
3,918,909	-		ECD_03719	0.22	-0.3
3,918,909	-		ECD_03719	0.22	-0.4
3,918,966	+		ECD_03719	0.25	-0.6
3,918,966	+		ECD_03719	0.25	+2.0
3,918,966	+		ECD_03719	0.25	-1.1
3,918,966	+		ECD_03719	0.25	-0.4
3,918,966	+		ECD_03719	0.25	+0.2
3,918,969	+		ECD_03719	0.26	-3.5
3,918,970	-		ECD_03719	0.26	+0.0
3,919,007	+		ECD_03719	0.28	-1.0
3,919,007	+		ECD_03719	0.28	-0.2
3,919,007	+		ECD_03719	0.28	+0.0
3,919,007	+		ECD_03719	0.28	+0.1
3,919,007	+		ECD_03719	0.28	+0.2
3,919,008	-		ECD_03719	0.28	+0.6
3,919,008	-		ECD_03719	0.28	-0.4
3,919,008	-		ECD_03719	0.28	-0.9
3,919,008	-		ECD_03719	0.28	-0.3
3,919,008	-		ECD_03719	0.28	-0.7
3,919,008	-		ECD_03719	0.28	-0.5
3,919,008	-		ECD_03719	0.28	+0.1
3,919,008	-		ECD_03719	0.28	-1.0
3,919,008	-		ECD_03719	0.28	-0.5
3,919,009	+		ECD_03719	0.28	-1.2
3,919,009	+		ECD_03719	0.28	-0.1
3,919,009	+		ECD_03719	0.28	-1.0
3,919,010	-		ECD_03719	0.28	-0.5
3,919,010	-		ECD_03719	0.28	-0.0
3,919,010	-		ECD_03719	0.28	-0.5
3,919,010	-		ECD_03719	0.28	-0.4
3,919,010	-		ECD_03719	0.28	+0.4
3,919,124	+		ECD_03719	0.36	-1.0
3,919,124	+		ECD_03719	0.36	-1.7
3,919,124	+		ECD_03719	0.36	-1.0
3,919,125	-		ECD_03719	0.36	-1.1
3,919,125	-		ECD_03719	0.36	-0.9
3,919,125	-		ECD_03719	0.36	+0.5
3,919,125	-		ECD_03719	0.36	+1.0
3,919,125	-		ECD_03719	0.36	+0.3
3,919,125	-		ECD_03719	0.36	-0.2
3,919,128	+		ECD_03719	0.36	-1.2
3,919,129	-		ECD_03719	0.36	-0.5
3,919,196	+		ECD_03719	0.41	-0.2
3,919,217	+		ECD_03719	0.42	-0.5
3,919,339	-		ECD_03719	0.50	+0.1
3,919,460	+		ECD_03719	0.58	-0.1
3,919,497	-		ECD_03719	0.61	+0.5
3,919,531	-		ECD_03719	0.63	+0.0