Strain Fitness in Escherichia coli BL21 around ECD_02715

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
2,854,238	-		ECD_02714	0.72	-1.8
2,854,250	-		ECD_02714	0.72	-1.9
2,854,250	-		ECD_02714	0.72	+0.1
2,854,254	+		ECD_02714	0.72	-0.5
2,854,254	+		ECD_02714	0.72	-0.4
2,854,309	+		ECD_02714	0.74	+0.0
2,854,309	+		ECD_02714	0.74	-0.5
2,854,309	+		ECD_02714	0.74	-0.0
2,854,352	+		ECD_02714	0.76	+0.9
2,854,352	+		ECD_02714	0.76	-0.4
2,854,352	+		ECD_02714	0.76	+0.6
2,854,352	+		ECD_02714	0.76	-0.1
2,854,352	+		ECD_02714	0.76	+0.5
2,854,352	+		ECD_02714	0.76	-0.2
2,854,353	-		ECD_02714	0.76	+1.8
2,854,353	-		ECD_02714	0.76	-0.9
2,854,366	+		ECD_02714	0.76	+0.5
2,854,513	+		ECD_02714	0.81	-0.8
2,854,583	+		ECD_02714	0.84	+0.2
2,854,583	+		ECD_02714	0.84	-1.2
2,854,584	-		ECD_02714	0.84	-0.8
2,854,584	-		ECD_02714	0.84	-0.4
2,854,585	+		ECD_02714	0.84	+0.5
2,854,585	+		ECD_02714	0.84	+1.5
2,854,586	-		ECD_02714	0.84	-2.8
2,854,696	+		ECD_02714	0.88	-0.9
2,854,717	-		ECD_02714	0.88	-0.6
2,854,734	-		ECD_02714	0.89	-0.7
2,854,765	+				+0.8
2,854,765	+				+0.3
2,854,766	-				+0.2
2,854,784	+				-2.2
2,854,784	+				-0.2
2,854,784	+				-0.8
2,854,784	+				-1.6
2,854,818	+				-0.1
2,854,818	+				+0.7
2,854,936	-				-1.9
2,855,052	+				+0.1
2,855,052	+				-0.0
2,855,096	+				-0.7
2,855,096	+				-1.4
2,855,097	-				-0.9
2,855,101	-				+0.5
2,855,121	-				-2.5
2,855,173	-				-0.7
2,855,220	+				-1.0
2,855,222	+				-0.2
2,855,244	+				-0.7
2,855,244	+				-1.5
2,855,244	+				-3.4
2,855,245	-				-0.9
2,855,245	-				-2.9
2,855,246	+				-0.2
2,855,330	+				-2.7
2,855,330	+				-1.5
2,855,386	+		ECD_02715	0.12	-0.4
2,855,387	-		ECD_02715	0.12	-2.8
2,855,397	+		ECD_02715	0.13	+0.2
2,855,424	+		ECD_02715	0.15	-0.7
2,855,425	-		ECD_02715	0.15	-0.9
2,855,432	+		ECD_02715	0.16	-0.4
2,855,432	+		ECD_02715	0.16	-1.0
2,855,438	+		ECD_02715	0.16	-1.4
2,855,439	-		ECD_02715	0.16	-1.7
2,855,502	+		ECD_02715	0.21	-1.9
2,855,503	-		ECD_02715	0.21	-0.6
2,855,503	-		ECD_02715	0.21	-2.7
2,855,558	+		ECD_02715	0.25	-1.9
2,855,558	+		ECD_02715	0.25	-0.9
2,855,622	+		ECD_02715	0.29	-0.7
2,855,622	+		ECD_02715	0.29	-3.7
2,855,622	+		ECD_02715	0.29	-0.1
2,855,622	+		ECD_02715	0.29	+0.2
2,855,622	+		ECD_02715	0.29	-0.6
2,855,622	+		ECD_02715	0.29	-1.1
2,855,623	-		ECD_02715	0.29	-0.3
2,855,623	-		ECD_02715	0.29	+1.2
2,855,623	-		ECD_02715	0.29	-0.9
2,855,623	-		ECD_02715	0.29	+0.5
2,855,632	+		ECD_02715	0.30	-1.1
2,855,633	-		ECD_02715	0.30	-1.5
2,855,637	-		ECD_02715	0.30	-0.6
2,855,637	-		ECD_02715	0.30	-2.3
2,855,649	+		ECD_02715	0.31	+0.2
2,855,649	+		ECD_02715	0.31	-0.5
2,855,668	-		ECD_02715	0.33	-2.1
2,855,676	-		ECD_02715	0.33	-0.2
2,855,690	+		ECD_02715	0.34	-0.2
2,855,691	-		ECD_02715	0.34	-0.7
2,855,691	-		ECD_02715	0.34	-2.9
2,855,700	+		ECD_02715	0.35	-0.0
2,855,752	-		ECD_02715	0.39	-0.4
2,855,752	-		ECD_02715	0.39	-1.7
2,855,764	+		ECD_02715	0.39	+0.4
2,855,764	+		ECD_02715	0.39	-1.3
2,855,764	+		ECD_02715	0.39	-0.1
2,855,764	+		ECD_02715	0.39	+1.8
2,855,764	+		ECD_02715	0.39	+0.6
2,855,764	+		ECD_02715	0.39	-1.0
2,855,765	-		ECD_02715	0.39	-2.3
2,855,765	-		ECD_02715	0.39	-2.2
2,855,795	+		ECD_02715	0.42	-0.7
2,855,795	+		ECD_02715	0.42	-0.6
2,855,795	+		ECD_02715	0.42	-0.3
2,855,796	-		ECD_02715	0.42	-2.5
2,855,837	+		ECD_02715	0.45	-0.7
2,855,864	+		ECD_02715	0.47	+0.2
2,855,864	+		ECD_02715	0.47	-0.1
2,855,865	-		ECD_02715	0.47	-1.1
2,855,875	+		ECD_02715	0.47	-0.6
2,855,875	+		ECD_02715	0.47	-3.2
2,855,875	+		ECD_02715	0.47	+0.2
2,855,876	-		ECD_02715	0.47	-0.9
2,855,876	-		ECD_02715	0.47	-1.9
2,855,876	-		ECD_02715	0.47	-0.7
2,855,876	-		ECD_02715	0.47	-1.2
2,855,877	+		ECD_02715	0.47	-1.7
2,855,916	+		ECD_02715	0.50	-2.1
2,855,960	-		ECD_02715	0.53	-3.2
2,855,974	-		ECD_02715	0.54	+0.6
2,856,007	+		ECD_02715	0.57	+0.2
2,856,016	-		ECD_02715	0.57	-0.7
2,856,088	+		ECD_02715	0.63	+2.3
2,856,161	+		ECD_02715	0.68	-1.0
2,856,161	+		ECD_02715	0.68	-1.9
2,856,186	+		ECD_02715	0.70	-0.5
2,856,223	+		ECD_02715	0.72	-1.9
2,856,224	-		ECD_02715	0.72	-0.5
2,856,267	-		ECD_02715	0.75	-1.7
2,856,386	+		ECD_02715	0.84	-0.4
2,856,386	+		ECD_02715	0.84	+0.2
2,856,405	+		ECD_02715	0.85	-0.9
2,856,405	+		ECD_02715	0.85	-0.5
2,856,405	+		ECD_02715	0.85	-0.6
2,856,405	+		ECD_02715	0.85	-0.9
2,856,406	-		ECD_02715	0.85	-1.7
2,856,406	-		ECD_02715	0.85	-2.7
2,856,406	-		ECD_02715	0.85	-1.8
2,856,406	-		ECD_02715	0.85	-0.9
2,856,406	-		ECD_02715	0.85	-1.3
2,856,422	+		ECD_02715	0.86	-1.1
2,856,422	+		ECD_02715	0.86	-1.1
2,856,422	+		ECD_02715	0.86	-0.4
2,856,429	-		ECD_02715	0.87	-2.2
2,856,446	-		ECD_02715	0.88	-1.4
2,856,446	-		ECD_02715	0.88	-1.4
2,856,485	-				-1.1
2,856,488	+				-0.1
2,856,534	-				-1.7
2,856,540	+				+0.7
2,856,540	+				-0.3
2,856,540	+				-0.3
2,856,540	+				-1.4
2,856,540	+				-0.3
2,856,540	+				+1.1
2,856,540	+				+0.6
2,856,540	+				-0.7
2,856,540	+				-0.5
2,856,540	+				+0.1
2,856,540	+				-0.3
2,856,541	-				-1.4
2,856,585	+				+0.5
2,856,588	+				-1.3
2,856,588	+				-0.8
2,856,588	+				-0.2
2,856,616	+				-0.2
2,856,616	+				+0.1
2,856,616	+				-0.5
2,856,616	+				-0.2
2,856,649	+				-0.3
2,856,671	+				-1.6
2,856,672	-				-1.6
2,856,742	+				+0.3
2,856,742	+				-0.9
2,856,848	-		ECD_02716	0.17	-2.2
2,856,850	+		ECD_02716	0.17	-1.8
2,856,850	+		ECD_02716	0.17	+0.6
2,856,851	-		ECD_02716	0.17	-1.8
2,856,872	+		ECD_02716	0.19	-0.2
2,856,872	+		ECD_02716	0.19	-0.2
2,856,872	+		ECD_02716	0.19	+0.5
2,856,873	-		ECD_02716	0.19	-1.8
2,856,907	-		ECD_02716	0.21	+0.4
2,856,907	-		ECD_02716	0.21	-0.9
2,856,907	-		ECD_02716	0.21	+0.7
2,856,935	+		ECD_02716	0.23	-1.7
2,856,935	+		ECD_02716	0.23	-2.3
2,856,973	+		ECD_02716	0.26	-1.9
2,856,974	-		ECD_02716	0.26	-1.2
2,856,978	+		ECD_02716	0.27	-1.0
2,857,018	+		ECD_02716	0.30	-1.5
2,857,019	-		ECD_02716	0.30	-1.5
2,857,022	+		ECD_02716	0.30	-0.3
2,857,106	+		ECD_02716	0.36	-2.6
2,857,106	+		ECD_02716	0.36	-0.7
2,857,106	+		ECD_02716	0.36	-0.1
2,857,106	+		ECD_02716	0.36	-0.6
2,857,106	+		ECD_02716	0.36	-1.8
2,857,107	-		ECD_02716	0.36	-2.0
2,857,107	-		ECD_02716	0.36	-1.0
2,857,107	-		ECD_02716	0.36	-2.3
2,857,112	+		ECD_02716	0.37	-1.0
2,857,113	-		ECD_02716	0.37	-0.3
2,857,113	-		ECD_02716	0.37	-3.3
2,857,155	+		ECD_02716	0.40	-3.1
2,857,155	+		ECD_02716	0.40	-1.0
2,857,234	+		ECD_02716	0.46	-1.3
2,857,234	+		ECD_02716	0.46	-2.2
2,857,235	-		ECD_02716	0.46	-0.7
2,857,235	-		ECD_02716	0.46	-0.8
2,857,235	-		ECD_02716	0.46	-1.6
2,857,235	-		ECD_02716	0.46	-1.4
2,857,235	-		ECD_02716	0.46	-1.8
2,857,235	-		ECD_02716	0.46	-0.3
2,857,236	+		ECD_02716	0.46	-0.6
2,857,237	-		ECD_02716	0.46	-0.1
2,857,237	-		ECD_02716	0.46	-0.2
2,857,331	+		ECD_02716	0.53	-2.1
2,857,331	+		ECD_02716	0.53	-1.7
2,857,410	+		ECD_02716	0.59	-0.7
2,857,586	+		ECD_02716	0.73	+1.3
2,857,586	+		ECD_02716	0.73	-0.4
2,857,586	+		ECD_02716	0.73	-1.5