Strain Fitness in Escherichia coli BL21 around ECD_02595

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
2,709,279	-		ECD_02593	0.67	-1.4
2,709,301	+		ECD_02593	0.70	-0.5
2,709,301	+		ECD_02593	0.70	-0.2
2,709,301	+		ECD_02593	0.70	-0.5
2,709,301	+		ECD_02593	0.70	-2.2
2,709,301	+		ECD_02593	0.70	-2.0
2,709,301	+		ECD_02593	0.70	-1.4
2,709,301	+		ECD_02593	0.70	-0.6
2,709,301	+		ECD_02593	0.70	-1.4
2,709,301	+		ECD_02593	0.70	-0.9
2,709,301	+		ECD_02593	0.70	+0.3
2,709,301	+		ECD_02593	0.70	-3.0
2,709,301	+		ECD_02593	0.70	+0.2
2,709,301	+		ECD_02593	0.70	-2.3
2,709,301	+		ECD_02593	0.70	-1.4
2,709,301	+		ECD_02593	0.70	-0.8
2,709,301	+		ECD_02593	0.70	-0.7
2,709,301	+		ECD_02593	0.70	+0.6
2,709,301	+		ECD_02593	0.70	-0.9
2,709,302	-		ECD_02593	0.70	-0.9
2,709,302	-		ECD_02593	0.70	+0.7
2,709,302	-		ECD_02593	0.70	+0.0
2,709,302	-		ECD_02593	0.70	+0.4
2,709,302	-		ECD_02593	0.70	+0.4
2,709,302	-		ECD_02593	0.70	-0.1
2,709,302	-		ECD_02593	0.70	-0.2
2,709,302	-		ECD_02593	0.70	+0.7
2,709,302	-		ECD_02593	0.70	-0.0
2,709,302	-		ECD_02593	0.70	+0.1
2,709,302	-		ECD_02593	0.70	+0.7
2,709,302	-		ECD_02593	0.70	+0.8
2,709,302	-		ECD_02593	0.70	-0.0
2,709,302	-		ECD_02593	0.70	+1.2
2,709,302	-		ECD_02593	0.70	-0.3
2,709,302	-		ECD_02593	0.70	+1.0
2,709,302	-		ECD_02593	0.70	-0.2
2,709,302	-		ECD_02593	0.70	-0.4
2,709,302	-		ECD_02593	0.70	+0.2
2,709,302	-		ECD_02593	0.70	-0.7
2,709,302	-		ECD_02593	0.70	+1.1
2,709,302	-		ECD_02593	0.70	+0.4
2,709,302	-		ECD_02593	0.70	-0.1
2,709,302	-		ECD_02593	0.70	-0.3
2,709,302	-		ECD_02593	0.70	+0.6
2,709,302	-		ECD_02593	0.70	-0.7
2,709,302	-		ECD_02593	0.70	+0.0
2,709,302	-		ECD_02593	0.70	+0.7
2,709,302	-		ECD_02593	0.70	-0.2
2,709,302	-		ECD_02593	0.70	+0.1
2,709,302	-		ECD_02593	0.70	-0.9
2,709,302	-		ECD_02593	0.70	+0.2
2,709,302	-		ECD_02593	0.70	+0.1
2,709,302	-		ECD_02593	0.70	+0.0
2,709,302	-		ECD_02593	0.70	+1.3
2,709,302	-		ECD_02593	0.70	+0.4
2,709,302	-		ECD_02593	0.70	+0.4
2,709,302	-		ECD_02593	0.70	+0.4
2,709,302	-		ECD_02593	0.70	-0.3
2,709,302	-		ECD_02593	0.70	-0.2
2,709,302	-		ECD_02593	0.70	+0.4
2,709,302	-		ECD_02593	0.70	-1.0
2,709,302	-		ECD_02593	0.70	-0.9
2,709,302	-		ECD_02593	0.70	+0.3
2,709,302	-		ECD_02593	0.70	+0.1
2,709,302	-		ECD_02593	0.70	+0.5
2,709,302	-		ECD_02593	0.70	+0.3
2,709,302	-		ECD_02593	0.70	-0.3
2,709,303	+		ECD_02593	0.70	-0.7
2,709,303	+		ECD_02593	0.70	+0.4
2,709,303	+		ECD_02593	0.70	-0.3
2,709,303	+		ECD_02593	0.70	-0.6
2,709,303	+		ECD_02593	0.70	+0.6
2,709,303	+		ECD_02593	0.70	-0.6
2,709,303	+		ECD_02593	0.70	-0.2
2,709,303	+		ECD_02593	0.70	-1.3
2,709,303	+		ECD_02593	0.70	-2.7
2,709,303	+		ECD_02593	0.70	-0.3
2,709,304	-		ECD_02593	0.71	+0.1
2,709,304	-		ECD_02593	0.71	+0.3
2,709,304	-		ECD_02593	0.71	-0.5
2,709,304	-		ECD_02593	0.71	+1.4
2,709,304	-		ECD_02593	0.71	+0.7
2,709,304	-		ECD_02593	0.71	+0.1
2,709,304	-		ECD_02593	0.71	-0.2
2,709,304	-		ECD_02593	0.71	+1.2
2,709,304	-		ECD_02593	0.71	-0.4
2,709,304	-		ECD_02593	0.71	-0.3
2,709,304	-		ECD_02593	0.71	+0.8
2,709,304	-		ECD_02593	0.71	-0.3
2,709,304	-		ECD_02593	0.71	+0.5
2,709,304	-		ECD_02593	0.71	+0.5
2,709,304	-		ECD_02593	0.71	+0.4
2,709,304	-		ECD_02593	0.71	+0.3
2,709,304	-		ECD_02593	0.71	-1.0
2,709,304	-		ECD_02593	0.71	+0.4
2,709,304	-		ECD_02593	0.71	+0.1
2,709,304	-		ECD_02593	0.71	-1.5
2,709,304	-		ECD_02593	0.71	+0.1
2,709,304	-		ECD_02593	0.71	+1.0
2,709,304	-		ECD_02593	0.71	+1.2
2,709,304	-		ECD_02593	0.71	+0.1
2,709,304	-		ECD_02593	0.71	+1.1
2,709,304	-		ECD_02593	0.71	+0.2
2,709,333	-		ECD_02593	0.75	-0.6
2,709,436	+				-0.9
2,709,437	-				-0.2
2,709,449	+				-2.1
2,709,449	+				-3.6
2,709,450	-				-0.3
2,709,450	-				+0.2
2,709,450	-				+0.9
2,709,471	-				+0.4
2,709,471	-				-0.5
2,709,482	+				-1.8
2,709,541	-				+0.7
2,709,541	-				-0.5
2,709,551	-				-0.2
2,709,551	-				+0.2
2,709,581	+		ECD_02594	0.13	+0.1
2,709,581	+		ECD_02594	0.13	-1.0
2,709,581	+		ECD_02594	0.13	-0.2
2,709,581	+		ECD_02594	0.13	-0.9
2,709,581	+		ECD_02594	0.13	-0.8
2,709,581	+		ECD_02594	0.13	-2.2
2,709,581	+		ECD_02594	0.13	+1.0
2,709,582	-		ECD_02594	0.13	-0.5
2,709,582	-		ECD_02594	0.13	+0.7
2,709,582	-		ECD_02594	0.13	+0.6
2,709,582	-		ECD_02594	0.13	-0.4
2,709,582	-		ECD_02594	0.13	+0.4
2,709,582	-		ECD_02594	0.13	+0.3
2,709,582	-		ECD_02594	0.13	-0.1
2,709,582	-		ECD_02594	0.13	-0.2
2,709,582	-		ECD_02594	0.13	+0.4
2,709,582	-		ECD_02594	0.13	-0.5
2,709,582	-		ECD_02594	0.13	+0.7
2,709,582	-		ECD_02594	0.13	+0.0
2,709,582	-		ECD_02594	0.13	+0.5
2,709,582	-		ECD_02594	0.13	-0.5
2,709,582	-		ECD_02594	0.13	+0.5
2,709,582	-		ECD_02594	0.13	+0.7
2,709,582	-		ECD_02594	0.13	+0.9
2,709,593	-		ECD_02594	0.15	-0.5
2,709,593	-		ECD_02594	0.15	+0.2
2,709,593	-		ECD_02594	0.15	+0.7
2,709,593	-		ECD_02594	0.15	-0.5
2,709,653	+		ECD_02594	0.23	+0.6
2,709,654	-		ECD_02594	0.23	+0.8
2,709,661	-		ECD_02594	0.24	+0.1
2,709,661	-		ECD_02594	0.24	-0.3
2,709,661	-		ECD_02594	0.24	-0.4
2,709,711	+		ECD_02594	0.30	-0.6
2,709,733	-		ECD_02594	0.33	-0.1
2,709,733	-		ECD_02594	0.33	+0.1
2,709,755	-		ECD_02594	0.36	+1.8
2,709,755	-		ECD_02594	0.36	+0.8
2,709,768	+		ECD_02594	0.38	-0.6
2,709,771	+		ECD_02594	0.38	-1.6
2,709,771	+		ECD_02594	0.38	-1.3
2,709,772	-		ECD_02594	0.38	-0.8
2,709,772	-		ECD_02594	0.38	+0.3
2,709,775	-		ECD_02594	0.39	-0.1
2,709,775	-		ECD_02594	0.39	-0.6
2,709,775	-		ECD_02594	0.39	-0.1
2,709,780	+		ECD_02594	0.39	-1.8
2,709,781	-		ECD_02594	0.39	-0.7
2,709,781	-		ECD_02594	0.39	+0.0
2,709,805	-		ECD_02594	0.43	-0.6
2,709,805	-		ECD_02594	0.43	+0.2
2,709,851	+		ECD_02594	0.49	-1.6
2,709,895	+		ECD_02594	0.54	-2.0
2,709,896	-		ECD_02594	0.54	-0.2
2,709,896	-		ECD_02594	0.54	-0.7
2,709,935	+		ECD_02594	0.60	-2.0
2,709,935	+		ECD_02594	0.60	-1.1
2,709,936	-		ECD_02594	0.60	+0.9
2,709,936	-		ECD_02594	0.60	+0.5
2,709,936	-		ECD_02594	0.60	+0.3
2,709,939	+		ECD_02594	0.60	-0.2
2,709,939	+		ECD_02594	0.60	-1.2
2,709,939	+		ECD_02594	0.60	-2.4
2,709,939	+		ECD_02594	0.60	-3.4
2,709,939	+		ECD_02594	0.60	-1.1
2,709,939	+		ECD_02594	0.60	-2.5
2,709,940	-		ECD_02594	0.60	+0.5
2,709,940	-		ECD_02594	0.60	-0.1
2,709,940	-		ECD_02594	0.60	+0.3
2,709,940	-		ECD_02594	0.60	-0.3
2,709,940	-		ECD_02594	0.60	-0.3
2,709,940	-		ECD_02594	0.60	+0.8
2,709,940	-		ECD_02594	0.60	-0.3
2,709,970	-		ECD_02594	0.64	+1.4
2,710,026	-		ECD_02594	0.72	-0.5
2,710,026	-		ECD_02594	0.72	+0.5
2,710,026	-		ECD_02594	0.72	+0.3
2,710,063	-		ECD_02594	0.76	+0.7
2,710,063	-		ECD_02594	0.76	+0.7
2,710,081	-		ECD_02594	0.79	+0.8
2,710,081	-		ECD_02594	0.79	-0.1
2,710,081	-		ECD_02594	0.79	-0.0
2,710,081	-		ECD_02594	0.79	-0.7
2,710,135	-		ECD_02594	0.86	-0.4
2,710,196	-				+1.6
2,710,196	-				-0.4
2,710,196	-				-1.0
2,710,196	-				+1.3
2,710,196	-				+0.3
2,710,196	-				-0.6
2,710,210	+				-2.1
2,710,211	-				-0.8
2,710,211	-				+0.6
2,710,225	-				+0.1
2,710,234	+				-2.0
2,710,234	+				+0.1
2,710,235	-				+0.1
2,710,242	+				-0.6
2,710,243	-				-0.4
2,710,243	-				-0.2
2,710,261	+				-1.4
2,710,261	+				-2.5
2,710,261	+				+0.7
2,710,262	-				-1.2
2,710,262	-				+0.4
2,710,262	-				-0.0
2,710,262	-				+0.4
2,710,319	+				-2.3
2,710,319	+				-2.0
2,710,320	-				+0.5
2,710,320	-				-0.6
2,710,349	+		ECD_02595	0.12	-1.8
2,710,349	+		ECD_02595	0.12	-1.7
2,710,349	+		ECD_02595	0.12	-1.0
2,710,350	-		ECD_02595	0.12	-0.8
2,710,350	-		ECD_02595	0.12	+0.6
2,710,350	-		ECD_02595	0.12	+0.5
2,710,362	+		ECD_02595	0.13	-1.0
2,710,409	+		ECD_02595	0.18	-2.8
2,710,410	-		ECD_02595	0.18	+0.8
2,710,419	-		ECD_02595	0.19	+0.2
2,710,419	-		ECD_02595	0.19	+0.4
2,710,419	-		ECD_02595	0.19	-0.1
2,710,542	-		ECD_02595	0.30	+0.5
2,710,542	-		ECD_02595	0.30	-1.4
2,710,580	-		ECD_02595	0.34	+0.0
2,710,706	-		ECD_02595	0.46	+0.1
2,710,706	-		ECD_02595	0.46	-0.2
2,710,706	-		ECD_02595	0.46	-0.3
2,710,726	+		ECD_02595	0.48	-0.1
2,710,726	+		ECD_02595	0.48	-0.2
2,710,726	+		ECD_02595	0.48	-2.4
2,710,727	-		ECD_02595	0.48	+0.3
2,710,727	-		ECD_02595	0.48	-0.1
2,710,805	+		ECD_02595	0.55	-1.5
2,710,814	+		ECD_02595	0.56	-2.2
2,710,822	+		ECD_02595	0.57	-2.1
2,710,823	-		ECD_02595	0.57	-0.2
2,710,823	-		ECD_02595	0.57	-0.6
2,710,879	+		ECD_02595	0.62	-0.3
2,710,905	-		ECD_02595	0.65	+0.1
2,710,933	-		ECD_02595	0.68	-0.3
2,710,933	-		ECD_02595	0.68	+1.2
2,711,111	-		ECD_02595	0.85	-0.1
2,711,135	-		ECD_02595	0.87	-0.1
2,711,135	-		ECD_02595	0.87	+0.5
2,711,143	+		ECD_02595	0.88	-2.5
2,711,144	-		ECD_02595	0.88	+0.3
2,711,144	-		ECD_02595	0.88	+0.8
2,711,144	-		ECD_02595	0.88	+1.3
2,711,144	-		ECD_02595	0.88	+0.8
2,711,144	-		ECD_02595	0.88	-0.1
2,711,247	+				-1.7
2,711,247	+				-2.7
2,711,248	-				+1.2
2,711,248	-				-0.1
2,711,248	-				-0.2
2,711,248	-				+0.3
2,711,248	-				-0.9
2,711,248	-				+0.7
2,711,750	-				+1.3
2,711,750	-				-0.9
2,711,750	-				+0.1
2,711,750	-				-0.7
2,711,750	-				+1.7
2,711,754	-				+0.1
2,711,754	-				+0.8
2,711,754	-				+0.2
2,711,754	-				+1.0
2,711,754	-				-0.1
2,711,754	-				+1.3
2,711,754	-				-0.2
2,711,754	-				+1.9
2,711,754	-				+1.3
2,711,754	-				-0.6