Strain Fitness in Escherichia coli BL21 around ECD_02583

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
2,696,131	-		ECD_02581	0.88	-0.3
2,696,173	+		ECD_02581	0.90	+0.7
2,696,173	+		ECD_02581	0.90	-0.0
2,696,174	-		ECD_02581	0.90	-2.4
2,696,174	-		ECD_02581	0.90	-0.4
2,696,174	-		ECD_02581	0.90	-0.7
2,696,174	-		ECD_02581	0.90	-1.8
2,696,174	-		ECD_02581	0.90	+0.4
2,696,240	+				+0.7
2,696,241	-				-1.4
2,696,263	-				-1.4
2,696,293	+				+1.5
2,696,293	+				+0.2
2,696,421	+				-1.1
2,696,422	-				-0.2
2,696,445	+				-1.6
2,696,502	-		ECD_02582	0.23	-0.3
2,696,545	+		ECD_02582	0.35	-2.3
2,696,546	-		ECD_02582	0.36	-1.5
2,696,546	-		ECD_02582	0.36	-0.3
2,696,581	-		ECD_02582	0.45	-2.0
2,696,581	-		ECD_02582	0.45	-0.1
2,696,581	-		ECD_02582	0.45	-0.4
2,696,602	+		ECD_02582	0.51	-1.3
2,696,603	-		ECD_02582	0.52	-1.0
2,696,635	+		ECD_02582	0.61	+0.6
2,696,673	+		ECD_02582	0.71	+0.1
2,696,674	-		ECD_02582	0.72	-1.7
2,696,716	-		ECD_02582	0.84	-1.0
2,696,758	+				-1.7
2,696,758	+				-2.0
2,696,759	-				-1.7
2,696,759	-				-0.5
2,696,759	-				-0.1
2,696,759	-				-2.1
2,696,791	-				-1.0
2,696,791	-				-1.0
2,696,798	-				+0.6
2,696,798	-				-1.3
2,696,798	-				-0.6
2,696,798	-				-0.1
2,696,798	-				+1.4
2,696,807	-				-0.2
2,696,813	+				-3.1
2,696,874	+				-2.5
2,696,875	-				+0.3
2,696,885	+				-1.6
2,696,885	+				-1.1
2,696,886	-				-0.3
2,696,886	-				-0.6
2,696,970	+				-1.2
2,696,994	-				+0.2
2,697,001	+				-0.0
2,697,001	+				+0.8
2,697,001	+				+1.4
2,697,002	-				-1.2
2,697,002	-				-0.6
2,697,033	+				+0.6
2,697,108	+				-1.3
2,697,108	+				+0.8
2,697,108	+				-0.3
2,697,150	+				+0.3
2,697,180	+				+0.3
2,697,215	+				-0.1
2,697,215	+				+0.1
2,697,216	-				-0.6
2,697,294	+				+1.4
2,697,295	-				-0.2
2,697,578	+		ECD_02583	0.20	+0.5
2,697,578	+		ECD_02583	0.20	+0.7
2,697,579	-		ECD_02583	0.20	-0.8
2,697,597	+		ECD_02583	0.21	+0.1
2,697,597	+		ECD_02583	0.21	+0.7
2,697,597	+		ECD_02583	0.21	+0.1
2,697,597	+		ECD_02583	0.21	-0.0
2,697,598	-		ECD_02583	0.21	-0.7
2,697,598	-		ECD_02583	0.21	-2.4
2,697,598	-		ECD_02583	0.21	-2.0
2,697,786	+		ECD_02583	0.28	+0.1
2,697,797	+		ECD_02583	0.29	-0.8
2,697,806	+		ECD_02583	0.29	+1.1
2,697,806	+		ECD_02583	0.29	-1.3
2,697,806	+		ECD_02583	0.29	+0.4
2,697,806	+		ECD_02583	0.29	-0.7
2,697,806	+		ECD_02583	0.29	-1.4
2,697,806	+		ECD_02583	0.29	+1.6
2,697,806	+		ECD_02583	0.29	-0.7
2,697,807	-		ECD_02583	0.29	-0.9
2,697,807	-		ECD_02583	0.29	-0.9
2,697,807	-		ECD_02583	0.29	-1.3
2,697,822	-		ECD_02583	0.30	-2.5
2,697,822	-		ECD_02583	0.30	-0.1
2,697,863	+		ECD_02583	0.31	+0.2
2,697,863	+		ECD_02583	0.31	-0.7
2,697,884	+		ECD_02583	0.32	+0.3
2,697,885	-		ECD_02583	0.32	+0.4
2,697,885	-		ECD_02583	0.32	-0.8
2,697,885	-		ECD_02583	0.32	-2.7
2,697,926	+		ECD_02583	0.34	+2.0
2,697,926	+		ECD_02583	0.34	+0.1
2,697,926	+		ECD_02583	0.34	-0.7
2,697,926	+		ECD_02583	0.34	-0.6
2,697,974	+		ECD_02583	0.36	+0.2
2,697,974	+		ECD_02583	0.36	+0.1
2,697,995	+		ECD_02583	0.36	+0.6
2,697,995	+		ECD_02583	0.36	-0.3
2,697,995	+		ECD_02583	0.36	+0.7
2,697,995	+		ECD_02583	0.36	-0.6
2,697,995	+		ECD_02583	0.36	+0.1
2,697,996	-		ECD_02583	0.37	-0.3
2,698,041	-		ECD_02583	0.38	-0.9
2,698,041	-		ECD_02583	0.38	+0.2
2,698,109	+		ECD_02583	0.41	+0.3
2,698,109	+		ECD_02583	0.41	-0.2
2,698,109	+		ECD_02583	0.41	+0.5
2,698,110	-		ECD_02583	0.41	+0.4
2,698,204	+		ECD_02583	0.45	-0.0
2,698,237	+		ECD_02583	0.46	+0.1
2,698,237	+		ECD_02583	0.46	+0.5
2,698,238	-		ECD_02583	0.46	+0.1
2,698,345	-		ECD_02583	0.50	+0.6
2,698,345	-		ECD_02583	0.50	+0.7
2,698,476	+		ECD_02583	0.55	-1.7
2,698,476	+		ECD_02583	0.55	-0.3
2,698,479	+		ECD_02583	0.55	-0.4
2,698,479	+		ECD_02583	0.55	-0.0
2,698,479	+		ECD_02583	0.55	-2.1
2,698,479	+		ECD_02583	0.55	-1.4
2,698,480	-		ECD_02583	0.55	-1.6
2,698,480	-		ECD_02583	0.55	-1.5
2,698,480	-		ECD_02583	0.55	+0.7
2,698,480	-		ECD_02583	0.55	+0.7
2,698,480	-		ECD_02583	0.55	-2.6
2,698,524	+		ECD_02583	0.57	-0.8
2,698,524	+		ECD_02583	0.57	+0.6
2,698,524	+		ECD_02583	0.57	-1.2
2,698,524	+		ECD_02583	0.57	-0.3
2,698,524	+		ECD_02583	0.57	+0.2
2,698,525	-		ECD_02583	0.57	-0.3
2,698,525	-		ECD_02583	0.57	-0.7
2,698,525	-		ECD_02583	0.57	-0.7
2,698,525	-		ECD_02583	0.57	-0.1
2,698,525	-		ECD_02583	0.57	+0.7
2,698,525	-		ECD_02583	0.57	-1.6
2,698,525	-		ECD_02583	0.57	-0.6
2,698,561	-		ECD_02583	0.59	-1.6
2,698,576	+		ECD_02583	0.59	-1.1
2,698,577	-		ECD_02583	0.59	-1.4
2,698,577	-		ECD_02583	0.59	-0.9
2,698,577	-		ECD_02583	0.59	-2.7
2,698,577	-		ECD_02583	0.59	-1.1
2,698,577	-		ECD_02583	0.59	-1.3
2,698,577	-		ECD_02583	0.59	-1.3
2,698,592	+		ECD_02583	0.60	-1.1
2,698,641	+		ECD_02583	0.62	-1.5
2,698,642	-		ECD_02583	0.62	-1.8
2,698,642	-		ECD_02583	0.62	-0.5
2,698,746	+		ECD_02583	0.66	-0.1
2,698,746	+		ECD_02583	0.66	-0.9
2,698,747	-		ECD_02583	0.66	-1.7
2,698,747	-		ECD_02583	0.66	-0.8
2,698,749	-		ECD_02583	0.66	+0.4
2,698,749	-		ECD_02583	0.66	-0.0
2,698,758	+		ECD_02583	0.66	+0.1
2,698,758	+		ECD_02583	0.66	-0.4
2,698,758	+		ECD_02583	0.66	+1.0
2,698,759	-		ECD_02583	0.66	-1.3
2,698,759	-		ECD_02583	0.66	-1.6
2,698,831	+		ECD_02583	0.69	-0.8
2,698,831	+		ECD_02583	0.69	-0.8
2,698,832	-		ECD_02583	0.69	-2.3
2,698,883	+		ECD_02583	0.71	+1.0
2,698,883	+		ECD_02583	0.71	-0.2
2,698,884	-		ECD_02583	0.71	-0.8
2,698,922	+		ECD_02583	0.73	-1.1
2,698,923	-		ECD_02583	0.73	-1.1
2,698,923	-		ECD_02583	0.73	-3.1
2,698,923	-		ECD_02583	0.73	-1.1
2,698,923	-		ECD_02583	0.73	-0.3
2,698,923	-		ECD_02583	0.73	-0.3
2,698,923	-		ECD_02583	0.73	-0.7
2,698,926	+		ECD_02583	0.73	-0.5
2,698,926	+		ECD_02583	0.73	-0.2
2,698,926	+		ECD_02583	0.73	-1.0
2,698,926	+		ECD_02583	0.73	-0.8
2,698,926	+		ECD_02583	0.73	-0.8
2,698,926	+		ECD_02583	0.73	-0.4
2,698,926	+		ECD_02583	0.73	-0.7
2,698,926	+		ECD_02583	0.73	-0.3
2,698,926	+		ECD_02583	0.73	-0.9
2,698,926	+		ECD_02583	0.73	-2.4
2,698,926	+		ECD_02583	0.73	-0.1
2,698,926	+		ECD_02583	0.73	-0.7
2,698,926	+		ECD_02583	0.73	+0.6
2,698,926	+		ECD_02583	0.73	-0.6
2,698,926	+		ECD_02583	0.73	-0.3
2,698,926	+		ECD_02583	0.73	+1.8
2,698,926	+		ECD_02583	0.73	+1.2
2,698,927	-		ECD_02583	0.73	-1.5
2,698,927	-		ECD_02583	0.73	-0.3
2,698,927	-		ECD_02583	0.73	-0.6
2,698,927	-		ECD_02583	0.73	-0.8
2,698,927	-		ECD_02583	0.73	-2.2
2,698,927	-		ECD_02583	0.73	-1.5
2,698,927	-		ECD_02583	0.73	-0.2
2,698,927	-		ECD_02583	0.73	-0.8
2,698,927	-		ECD_02583	0.73	-1.3
2,698,927	-		ECD_02583	0.73	-2.7
2,698,927	-		ECD_02583	0.73	-0.8
2,698,927	-		ECD_02583	0.73	-0.8
2,698,927	-		ECD_02583	0.73	-1.0
2,698,927	-		ECD_02583	0.73	-0.8
2,698,927	-		ECD_02583	0.73	-1.3
2,698,927	-		ECD_02583	0.73	-1.5
2,698,927	-		ECD_02583	0.73	-2.2
2,698,927	-		ECD_02583	0.73	+0.2
2,698,929	-		ECD_02583	0.73	-1.6
2,698,929	-		ECD_02583	0.73	-0.6
2,698,962	+		ECD_02583	0.74	-0.7
2,698,963	-		ECD_02583	0.74	-1.0
2,698,975	-		ECD_02583	0.75	-1.4
2,698,975	-		ECD_02583	0.75	-0.6
2,698,975	-		ECD_02583	0.75	-0.8
2,698,975	-		ECD_02583	0.75	-0.6
2,698,975	-		ECD_02583	0.75	-1.3
2,698,975	-		ECD_02583	0.75	-2.1
2,698,975	-		ECD_02583	0.75	-2.5
2,698,975	-		ECD_02583	0.75	+0.6
2,698,975	-		ECD_02583	0.75	-0.8
2,699,029	+		ECD_02583	0.77	-0.9
2,699,069	+		ECD_02583	0.78	-0.8
2,699,097	-		ECD_02583	0.80	-0.5
2,699,097	-		ECD_02583	0.80	-1.6
2,699,101	+		ECD_02583	0.80	-0.1
2,699,101	+		ECD_02583	0.80	+0.7
2,699,102	-		ECD_02583	0.80	+1.0
2,699,102	-		ECD_02583	0.80	-1.3
2,699,118	+		ECD_02583	0.80	-1.6
2,699,163	+		ECD_02583	0.82	-1.1
2,699,163	+		ECD_02583	0.82	-0.3
2,699,163	+		ECD_02583	0.82	-1.7
2,699,210	+		ECD_02583	0.84	-0.3
2,699,211	-		ECD_02583	0.84	-0.3
2,699,211	-		ECD_02583	0.84	-0.0
2,699,216	+		ECD_02583	0.84	-1.0
2,699,217	-		ECD_02583	0.84	-2.0
2,699,230	+		ECD_02583	0.85	-2.0
2,699,244	+		ECD_02583	0.85	-0.6
2,699,244	+		ECD_02583	0.85	-1.7
2,699,333	+		ECD_02583	0.89	-1.4
2,699,334	-		ECD_02583	0.89	-1.3
2,699,334	-		ECD_02583	0.89	-0.5
2,699,371	-				-2.5
2,699,417	+				-1.6
2,699,417	+				-0.3
2,699,418	-				-3.1
2,699,619	+				-0.6
2,699,656	-				-1.3
2,699,775	-				-1.9
2,699,777	-				-2.3
2,699,860	+		ECD_02584	0.20	-2.5
2,699,861	-		ECD_02584	0.20	-2.6
2,700,067	+		ECD_02584	0.52	-1.8
2,700,514	+		ECD_02585	0.10	-1.0
2,700,518	-		ECD_02585	0.11	-0.0
2,700,518	-		ECD_02585	0.11	+0.4
2,700,518	-		ECD_02585	0.11	+0.7
2,700,570	+		ECD_02585	0.18	+1.0