Strain Fitness in Escherichia coli BL21 around ECD_02097

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02096 and ECD_02097 are separated by 16 nucleotidesECD_02097 and ECD_02098 overlap by 1 nucleotides ECD_02096: ECD_02096 - fused fructose-specific PTS enzymes: IIBcomponent/IIC components, at 2,154,568 to 2,156,259 _02096 ECD_02097: ECD_02097 - fructose-1-phosphate kinase, at 2,156,276 to 2,157,214 _02097 ECD_02098: ECD_02098 - fused fructose-specific PTS enzymes: IIA component/HPr component, at 2,157,214 to 2,158,344 _02098 Position (kb) 2156 2157 2158Strain fitness (log2 ratio) -1 0 1 2 3at 2155.300 kb on - strand, within ECD_02096at 2155.398 kb on - strand, within ECD_02096at 2155.554 kb on - strand, within ECD_02096at 2155.554 kb on - strand, within ECD_02096at 2155.554 kb on - strand, within ECD_02096at 2155.554 kb on - strand, within ECD_02096at 2155.554 kb on - strand, within ECD_02096at 2155.718 kb on + strand, within ECD_02096at 2155.719 kb on - strand, within ECD_02096at 2155.719 kb on - strand, within ECD_02096at 2155.792 kb on + strand, within ECD_02096at 2156.209 kb on - strandat 2156.210 kb on + strandat 2156.210 kb on + strandat 2156.211 kb on - strandat 2156.211 kb on - strandat 2156.292 kb on - strandat 2156.292 kb on - strandat 2156.336 kb on - strandat 2156.339 kb on - strandat 2156.358 kb on - strandat 2156.447 kb on - strand, within ECD_02097at 2156.472 kb on - strand, within ECD_02097at 2156.552 kb on - strand, within ECD_02097at 2156.552 kb on - strand, within ECD_02097at 2156.958 kb on - strand, within ECD_02097at 2157.069 kb on - strand, within ECD_02097at 2157.194 kb on - strandat 2157.197 kb on - strandat 2157.319 kb on - strandat 2157.349 kb on - strand, within ECD_02098at 2157.349 kb on - strand, within ECD_02098at 2157.405 kb on + strand, within ECD_02098at 2157.571 kb on - strand, within ECD_02098at 2157.745 kb on - strand, within ECD_02098at 2158.065 kb on - strand, within ECD_02098at 2158.168 kb on - strand, within ECD_02098

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
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2,155,300 - ECD_02096 0.43 -0.6
2,155,398 - ECD_02096 0.49 +0.3
2,155,554 - ECD_02096 0.58 -0.2
2,155,554 - ECD_02096 0.58 +2.3
2,155,554 - ECD_02096 0.58 -0.2
2,155,554 - ECD_02096 0.58 +0.9
2,155,554 - ECD_02096 0.58 +0.4
2,155,718 + ECD_02096 0.68 +1.7
2,155,719 - ECD_02096 0.68 +0.7
2,155,719 - ECD_02096 0.68 +0.3
2,155,792 + ECD_02096 0.72 +1.5
2,156,209 - +0.9
2,156,210 + -1.6
2,156,210 + -0.0
2,156,211 - -0.6
2,156,211 - -0.0
2,156,292 - -0.2
2,156,292 - +2.1
2,156,336 - +1.8
2,156,339 - +2.4
2,156,358 - +1.4
2,156,447 - ECD_02097 0.18 +2.4
2,156,472 - ECD_02097 0.21 +1.2
2,156,552 - ECD_02097 0.29 +2.0
2,156,552 - ECD_02097 0.29 +2.3
2,156,958 - ECD_02097 0.73 +2.3
2,157,069 - ECD_02097 0.84 +2.1
2,157,194 - +2.3
2,157,197 - +2.1
2,157,319 - -0.1
2,157,349 - ECD_02098 0.12 +1.7
2,157,349 - ECD_02098 0.12 +1.6
2,157,405 + ECD_02098 0.17 +0.6
2,157,571 - ECD_02098 0.32 +1.3
2,157,745 - ECD_02098 0.47 +0.7
2,158,065 - ECD_02098 0.75 +3.1
2,158,168 - ECD_02098 0.84 +0.4

Or see this region's nucleotide sequence