Strain Fitness in Escherichia coli BL21 around ECD_00950

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00949 and ECD_00950 are separated by 173 nucleotidesECD_00950 and ECD_00951 overlap by 4 nucleotides ECD_00949: ECD_00949 - dihydro-orotate oxidase, FMN-linked, at 1,009,857 to 1,010,867 _00949 ECD_00950: ECD_00950 - FtsZ stabilizer, at 1,011,041 to 1,011,583 _00950 ECD_00951: ECD_00951 - 6-N-hydroxylaminopurine detoxification oxidoreductase, at 1,011,580 to 1,012,689 _00951 Position (kb) 1011 1012Strain fitness (log2 ratio) -2 -1 0 1at 1010.250 kb on + strand, within ECD_00949at 1010.487 kb on + strand, within ECD_00949at 1010.570 kb on + strand, within ECD_00949at 1011.126 kb on + strand, within ECD_00950at 1011.618 kb on + strandat 1011.619 kb on - strandat 1011.781 kb on - strand, within ECD_00951at 1011.781 kb on - strand, within ECD_00951at 1012.013 kb on - strand, within ECD_00951at 1012.518 kb on + strand, within ECD_00951at 1012.526 kb on - strand, within ECD_00951at 1012.560 kb on + strand, within ECD_00951

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
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1,010,250 + ECD_00949 0.39 -0.6
1,010,487 + ECD_00949 0.62 -0.6
1,010,570 + ECD_00949 0.71 -0.5
1,011,126 + ECD_00950 0.16 -2.6
1,011,618 + -1.1
1,011,619 - -0.6
1,011,781 - ECD_00951 0.18 -1.7
1,011,781 - ECD_00951 0.18 +0.7
1,012,013 - ECD_00951 0.39 -0.2
1,012,518 + ECD_00951 0.85 -1.4
1,012,526 - ECD_00951 0.85 -1.3
1,012,560 + ECD_00951 0.88 +0.2

Or see this region's nucleotide sequence