Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00614 and ECD_00615 are separated by 307 nucleotides ECD_00615 and ECD_00616 are separated by 59 nucleotides
ECD_00614: ECD_00614 - uncharacterized protein, at 637,074 to 637,781
_00614
ECD_00615: ECD_00615 - J domain-containing HscC co-chaperone; Hsc56, at 638,089 to 639,228
_00615
ECD_00616: ECD_00616 - Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor, at 639,288 to 640,958
_00616
Position (kb) 638
639
640 Strain fitness (log2 ratio) -2
-1
0
1
2 at 637.345 kb on + strand, within ECD_00614 at 637.466 kb on + strand, within ECD_00614 at 637.533 kb on + strand, within ECD_00614 at 637.538 kb on + strand, within ECD_00614 at 637.704 kb on + strand, within ECD_00614 at 637.714 kb on + strand at 637.912 kb on + strand at 637.994 kb on + strand at 638.075 kb on + strand at 638.108 kb on + strand at 638.135 kb on + strand at 638.136 kb on - strand at 638.371 kb on + strand, within ECD_00615 at 638.453 kb on - strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.625 kb on + strand, within ECD_00615 at 638.637 kb on + strand, within ECD_00615 at 638.688 kb on - strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.746 kb on + strand, within ECD_00615 at 638.754 kb on + strand, within ECD_00615 at 638.949 kb on - strand, within ECD_00615 at 638.988 kb on + strand, within ECD_00615 at 638.991 kb on + strand, within ECD_00615 at 639.188 kb on + strand at 639.223 kb on - strand at 639.874 kb on + strand, within ECD_00616
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1 remove 637,345 + ECD_00614 0.38 +0.6 637,466 + ECD_00614 0.55 -2.1 637,533 + ECD_00614 0.65 -2.0 637,538 + ECD_00614 0.66 -0.9 637,704 + ECD_00614 0.89 -1.4 637,714 + -0.8 637,912 + -0.1 637,994 + -0.3 638,075 + -1.0 638,108 + +1.3 638,135 + -0.5 638,136 - -0.5 638,371 + ECD_00615 0.25 +0.7 638,453 - ECD_00615 0.32 -0.1 638,542 + ECD_00615 0.40 -0.4 638,542 + ECD_00615 0.40 -0.3 638,542 + ECD_00615 0.40 -0.4 638,625 + ECD_00615 0.47 +0.5 638,637 + ECD_00615 0.48 -0.9 638,688 - ECD_00615 0.53 -1.5 638,720 + ECD_00615 0.55 -0.1 638,720 + ECD_00615 0.55 +0.1 638,720 + ECD_00615 0.55 -0.4 638,746 + ECD_00615 0.58 +0.1 638,754 + ECD_00615 0.58 -0.2 638,949 - ECD_00615 0.75 -0.6 638,988 + ECD_00615 0.79 -1.1 638,991 + ECD_00615 0.79 -0.3 639,188 + +0.8 639,223 - +2.4 639,874 + ECD_00616 0.35 -1.0
Or see this region's nucleotide sequence