Strain Fitness in Escherichia coli BW25113 around b4137

Experiment: limonene 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	limonene 5 vol%
4,362,119	+	dipZ	b4136	0.44	+0.4
4,362,127	-	dipZ	b4136	0.45	+0.7
4,362,142	-	dipZ	b4136	0.46	+1.0
4,362,156	+	dipZ	b4136	0.46	-0.3
4,362,157	-	dipZ	b4136	0.46	-0.9
4,362,160	-	dipZ	b4136	0.47	+0.3
4,362,160	-	dipZ	b4136	0.47	+0.3
4,362,177	+	dipZ	b4136	0.48	+0.5
4,362,229	+	dipZ	b4136	0.51	-0.2
4,362,288	+	dipZ	b4136	0.54	-0.8
4,362,288	+	dipZ	b4136	0.54	+0.8
4,362,343	+	dipZ	b4136	0.57	-0.1
4,362,344	-	dipZ	b4136	0.57	-0.9
4,362,399	-	dipZ	b4136	0.61	-0.9
4,362,409	-	dipZ	b4136	0.61	+0.5
4,362,409	-	dipZ	b4136	0.61	+0.7
4,362,478	+	dipZ	b4136	0.65	-0.3
4,362,478	+	dipZ	b4136	0.65	-0.2
4,362,479	-	dipZ	b4136	0.65	-0.6
4,362,479	-	dipZ	b4136	0.65	+0.5
4,362,486	-	dipZ	b4136	0.66	-0.2
4,362,521	+	dipZ	b4136	0.68	-0.1
4,362,521	+	dipZ	b4136	0.68	+0.4
4,362,545	-	dipZ	b4136	0.69	+0.3
4,362,545	-	dipZ	b4136	0.69	+0.9
4,362,611	+	dipZ	b4136	0.73	+0.5
4,362,611	+	dipZ	b4136	0.73	-1.1
4,362,686	-	dipZ	b4136	0.78	+2.1
4,362,686	-	dipZ	b4136	0.78	-0.9
4,362,698	+	dipZ	b4136	0.78	-0.5
4,362,698	+	dipZ	b4136	0.78	-1.2
4,362,703	+	dipZ	b4136	0.79	-0.4
4,362,711	-	dipZ	b4136	0.79	+0.9
4,362,711	-	dipZ	b4136	0.79	-0.5
4,362,745	+	dipZ	b4136	0.81	+0.5
4,362,745	+	dipZ	b4136	0.81	-0.3
4,362,807	-	dipZ	b4136	0.85	-0.0
4,362,918	+				+0.8
4,362,918	+				+0.2
4,362,926	-				+0.4
4,362,926	-				+0.6
4,362,926	-				-0.8
4,362,987	+				-0.1
4,363,082	-	cutA	b4137	0.12	+0.5
4,363,082	-	cutA	b4137	0.12	-0.7
4,363,086	+	cutA	b4137	0.13	+0.4
4,363,146	+	cutA	b4137	0.31	-1.1
4,363,152	-	cutA	b4137	0.33	+0.1
4,363,152	-	cutA	b4137	0.33	+0.8
4,363,188	+	cutA	b4137	0.43	+0.2
4,363,233	-	cutA	b4137	0.57	+0.9
4,363,233	-	cutA	b4137	0.57	-0.0
4,363,233	-	cutA	b4137	0.57	+0.9
4,363,302	+	cutA	b4137	0.77	+0.1
4,363,320	+	cutA	b4137	0.82	+0.4
4,363,332	+	cutA	b4137	0.86	+0.3
4,363,332	+	cutA	b4137	0.86	-0.4
4,363,333	-	cutA	b4137	0.86	-0.2
4,363,375	+				-0.2
4,363,376	+				-2.2
4,363,415	-				+0.3
4,363,430	-				+1.5
4,363,434	+				-1.5
4,363,442	-				+0.6
4,363,510	+				-0.2
4,363,542	-				+0.1
4,363,542	-				-0.5
4,363,547	-				-0.2
4,363,604	+				+0.5
4,363,604	+				+1.1
4,363,626	+	dcuA	b4138	0.10	-1.3
4,363,643	+	dcuA	b4138	0.11	+0.4
4,363,665	+	dcuA	b4138	0.13	+0.0
4,363,689	+	dcuA	b4138	0.15	-0.4
4,363,760	+	dcuA	b4138	0.20	+0.3
4,363,760	+	dcuA	b4138	0.20	+0.3
4,363,762	+	dcuA	b4138	0.21	-0.1
4,363,762	+	dcuA	b4138	0.21	+0.3
4,363,768	-	dcuA	b4138	0.21	+0.1
4,363,768	-	dcuA	b4138	0.21	+0.3
4,363,803	+	dcuA	b4138	0.24	+0.3
4,363,813	+	dcuA	b4138	0.24	+0.5
4,363,813	+	dcuA	b4138	0.24	-1.3
4,363,848	+	dcuA	b4138	0.27	+0.5
4,363,848	+	dcuA	b4138	0.27	-0.2
4,363,920	-	dcuA	b4138	0.33	-0.4
4,363,939	-	dcuA	b4138	0.34	-0.2
4,364,018	-	dcuA	b4138	0.40	+0.0
4,364,032	-	dcuA	b4138	0.41	-0.5
4,364,032	-	dcuA	b4138	0.41	-0.5
4,364,051	-	dcuA	b4138	0.43	+0.2
4,364,051	-	dcuA	b4138	0.43	-0.9
4,364,080	+	dcuA	b4138	0.45	+0.9
4,364,102	+	dcuA	b4138	0.47	+0.7
4,364,151	+	dcuA	b4138	0.50	+0.1
4,364,151	+	dcuA	b4138	0.50	+1.3
4,364,181	+	dcuA	b4138	0.53	+0.1
4,364,181	+	dcuA	b4138	0.53	+0.1
4,364,189	-	dcuA	b4138	0.53	+0.2
4,364,189	-	dcuA	b4138	0.53	-0.1
4,364,189	-	dcuA	b4138	0.53	-0.3
4,364,207	+	dcuA	b4138	0.55	+0.8
4,364,232	+	dcuA	b4138	0.57	+0.2
4,364,234	+	dcuA	b4138	0.57	+0.0
4,364,240	+	dcuA	b4138	0.57	-1.2
4,364,291	-	dcuA	b4138	0.61	-0.4
4,364,298	+	dcuA	b4138	0.62	+0.1
4,364,298	-	dcuA	b4138	0.62	+0.1
4,364,313	-	dcuA	b4138	0.63	-0.0
4,364,329	-	dcuA	b4138	0.64	-1.8
4,364,331	-	dcuA	b4138	0.64	+0.3
4,364,338	-	dcuA	b4138	0.65	+0.1
4,364,338	-	dcuA	b4138	0.65	-1.3
4,364,338	-	dcuA	b4138	0.65	-0.3
4,364,357	+	dcuA	b4138	0.66	-0.7
4,364,367	-	dcuA	b4138	0.67	-0.3
4,364,367	-	dcuA	b4138	0.67	+1.8
4,364,374	+	dcuA	b4138	0.68	+0.8