Strain Fitness in Escherichia coli BL21 around ECD_02685

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_10
2,813,887	+		ECD_02684	0.81	-2.3
2,813,888	-		ECD_02684	0.81	-0.1
2,813,888	-		ECD_02684	0.81	-0.8
2,813,944	-		ECD_02684	0.84	-0.6
2,813,944	-		ECD_02684	0.84	+0.3
2,813,944	-		ECD_02684	0.84	-1.1
2,813,966	-		ECD_02684	0.85	-0.6
2,814,023	+		ECD_02684	0.87	-0.9
2,814,023	+		ECD_02684	0.87	-0.6
2,814,024	-		ECD_02684	0.87	+0.4
2,814,034	+		ECD_02684	0.88	-2.1
2,814,035	-		ECD_02684	0.88	+0.2
2,814,037	+		ECD_02684	0.88	-1.8
2,814,037	+		ECD_02684	0.88	-0.5
2,814,037	+		ECD_02684	0.88	-1.1
2,814,043	+		ECD_02684	0.88	-0.3
2,814,043	+		ECD_02684	0.88	+1.1
2,814,043	+		ECD_02684	0.88	+0.1
2,814,044	-		ECD_02684	0.88	-0.3
2,814,044	-		ECD_02684	0.88	-0.6
2,814,044	-		ECD_02684	0.88	+0.0
2,814,044	-		ECD_02684	0.88	-0.1
2,814,044	-		ECD_02684	0.88	-0.2
2,814,044	-		ECD_02684	0.88	+0.3
2,814,076	+		ECD_02684	0.90	-2.5
2,814,077	-		ECD_02684	0.90	-0.1
2,814,077	-		ECD_02684	0.90	-1.3
2,814,077	-		ECD_02684	0.90	-0.6
2,814,097	+				-0.2
2,814,098	-				-0.8
2,814,098	-				-0.2
2,814,098	-				-1.8
2,814,098	-				+0.3
2,814,098	-				-0.1
2,814,099	+				-0.4
2,814,099	+				-2.7
2,814,099	+				-2.3
2,814,099	+				-3.1
2,814,099	+				-0.4
2,814,099	+				-1.7
2,814,099	+				-1.6
2,814,100	-				-0.0
2,814,100	-				+0.2
2,814,100	-				+1.0
2,814,100	-				-0.6
2,814,100	-				+0.6
2,814,113	+				-0.8
2,814,114	-				-0.3
2,814,123	+				+0.5
2,814,178	+				-2.5
2,814,178	+				-2.6
2,814,178	+				-2.1
2,814,179	-				-1.7
2,814,179	-				-0.5
2,814,194	-				-2.0
2,814,199	+				-1.8
2,814,199	+				-0.4
2,814,200	-				-0.7
2,814,200	-				-2.1
2,814,200	-				+0.1
2,814,200	-				-1.0
2,814,203	+				+0.6
2,814,203	+				-1.0
2,814,203	+				-1.4
2,814,204	-				-0.1
2,814,204	-				-0.4
2,814,256	-				+0.2
2,814,343	-				-2.0
2,814,352	-				-2.6
2,814,352	-				-2.0
2,814,352	-				-1.0
2,814,371	-				-0.6
2,814,376	-				-1.0
2,814,376	-				-1.1
2,814,461	+				-0.7
2,814,461	+				-1.1
2,814,461	+				-0.3
2,814,462	-				-0.7
2,814,550	-				+1.1
2,814,652	+				+1.4
2,814,653	-				+1.0
2,814,653	-				-0.1
2,814,653	-				+1.5
2,814,658	+				-1.7
2,814,658	+				-1.8
2,814,658	+				-0.9
2,814,659	-				+0.6
2,814,659	-				+1.4
2,814,659	-				+0.9
2,814,659	-				+1.0
2,814,659	-				+1.2
2,814,678	+				-1.1
2,814,679	-				-1.6
2,814,767	+				-1.6
2,814,767	+				-0.0
2,814,767	+				-0.6
2,814,768	-				-1.0
2,814,768	-				-1.3
2,814,771	+				-1.1
2,814,772	-				-0.6
2,814,854	+				+0.2
2,814,869	+				+0.8
2,814,874	+				-0.6
2,814,874	+				-0.4
2,814,875	-				-1.6
2,814,900	+				-1.5
2,814,900	+				-1.2
2,814,900	+				+0.4
2,814,950	-				-0.6
2,814,959	-				-0.9
2,814,991	+		ECD_02685	0.11	+0.9
2,814,991	+		ECD_02685	0.11	-0.8
2,814,991	+		ECD_02685	0.11	+2.1
2,815,009	+		ECD_02685	0.12	+0.5
2,815,009	+		ECD_02685	0.12	-0.5
2,815,009	+		ECD_02685	0.12	+0.3
2,815,009	+		ECD_02685	0.12	-0.4
2,815,009	+		ECD_02685	0.12	-0.5
2,815,009	+		ECD_02685	0.12	-0.1
2,815,009	+		ECD_02685	0.12	-0.3
2,815,009	+		ECD_02685	0.12	+1.1
2,815,009	+		ECD_02685	0.12	-0.4
2,815,009	+		ECD_02685	0.12	+0.8
2,815,009	+		ECD_02685	0.12	-0.2
2,815,009	+		ECD_02685	0.12	-0.3
2,815,010	-		ECD_02685	0.12	-1.6
2,815,010	-		ECD_02685	0.12	-2.5
2,815,013	+		ECD_02685	0.13	-0.5
2,815,014	-		ECD_02685	0.13	-2.5
2,815,014	-		ECD_02685	0.13	-0.2
2,815,137	-		ECD_02685	0.25	-1.1
2,815,319	-		ECD_02685	0.42	-0.5
2,815,345	+		ECD_02685	0.45	+0.0
2,815,345	+		ECD_02685	0.45	+0.3
2,815,345	+		ECD_02685	0.45	-0.9
2,815,345	+		ECD_02685	0.45	+1.4
2,815,345	+		ECD_02685	0.45	-0.4
2,815,346	-		ECD_02685	0.45	-1.1
2,815,346	-		ECD_02685	0.45	-1.6
2,815,346	-		ECD_02685	0.45	-0.8
2,815,392	+		ECD_02685	0.50	+1.2
2,815,392	+		ECD_02685	0.50	-0.8
2,815,421	+		ECD_02685	0.52	+1.0
2,815,421	+		ECD_02685	0.52	-0.3
2,815,422	-		ECD_02685	0.52	+0.9
2,815,433	-		ECD_02685	0.53	+0.3
2,815,441	+		ECD_02685	0.54	-2.9
2,815,442	-		ECD_02685	0.54	+0.6
2,815,442	-		ECD_02685	0.54	-0.9
2,815,442	-		ECD_02685	0.54	-1.7
2,815,472	+		ECD_02685	0.57	+0.9
2,815,475	+		ECD_02685	0.58	+0.2
2,815,475	+		ECD_02685	0.58	+0.2
2,815,475	+		ECD_02685	0.58	-1.0
2,815,475	+		ECD_02685	0.58	-0.7
2,815,475	+		ECD_02685	0.58	+0.3
2,815,475	+		ECD_02685	0.58	+0.4
2,815,475	+		ECD_02685	0.58	+0.3
2,815,476	-		ECD_02685	0.58	-0.6
2,815,476	-		ECD_02685	0.58	-0.3
2,815,610	+		ECD_02685	0.71	-0.7
2,815,610	+		ECD_02685	0.71	+0.2
2,815,611	-		ECD_02685	0.71	-1.6
2,815,611	-		ECD_02685	0.71	-0.2
2,815,611	-		ECD_02685	0.71	-0.4
2,815,612	+		ECD_02685	0.71	+0.3
2,815,612	+		ECD_02685	0.71	-0.4
2,815,612	+		ECD_02685	0.71	-0.5
2,815,654	+		ECD_02685	0.75	-0.6
2,815,660	+		ECD_02685	0.75	-0.8
2,815,660	+		ECD_02685	0.75	-0.5
2,815,668	+		ECD_02685	0.76	-1.6
2,815,718	+		ECD_02685	0.81	-0.1
2,815,718	+		ECD_02685	0.81	-0.6
2,815,718	+		ECD_02685	0.81	+0.9
2,815,718	+		ECD_02685	0.81	+0.8
2,815,718	+		ECD_02685	0.81	+0.5
2,815,719	-		ECD_02685	0.81	-2.9
2,815,829	-				-0.7
2,815,838	-				-0.9
2,815,851	+				+0.7
2,815,851	+				-0.8
2,815,851	+				-1.1
2,815,851	+				+0.9
2,815,851	+				-1.2
2,815,851	+				-0.3
2,815,920	+				+0.3
2,815,921	-				-0.0
2,815,921	-				+0.5
2,815,941	-				+0.7
2,816,026	-				+0.9
2,816,026	-				+0.4
2,816,026	-				+0.9
2,816,026	-				+1.3
2,816,026	-				+2.1
2,816,026	-				+1.3
2,816,026	-				+0.9
2,816,049	+		ECD_02686	0.10	-1.1
2,816,049	+		ECD_02686	0.10	+0.8
2,816,050	-		ECD_02686	0.10	+1.0
2,816,050	-		ECD_02686	0.10	+1.1
2,816,060	-		ECD_02686	0.11	+1.1
2,816,060	-		ECD_02686	0.11	+1.3
2,816,070	-		ECD_02686	0.12	+1.1
2,816,077	-		ECD_02686	0.13	+1.7
2,816,077	-		ECD_02686	0.13	-1.1
2,816,077	-		ECD_02686	0.13	+1.6
2,816,077	-		ECD_02686	0.13	+1.4
2,816,077	-		ECD_02686	0.13	+2.8
2,816,077	-		ECD_02686	0.13	+1.9
2,816,160	-		ECD_02686	0.19	+1.0
2,816,242	-		ECD_02686	0.26	+1.8
2,816,242	-		ECD_02686	0.26	+0.9
2,816,242	-		ECD_02686	0.26	+1.2
2,816,242	-		ECD_02686	0.26	+1.3
2,816,242	-		ECD_02686	0.26	+0.7
2,816,242	-		ECD_02686	0.26	+0.9
2,816,246	-		ECD_02686	0.26	+0.8
2,816,246	-		ECD_02686	0.26	+1.9
2,816,246	-		ECD_02686	0.26	+1.0
2,816,246	-		ECD_02686	0.26	+0.8
2,816,246	-		ECD_02686	0.26	+1.3
2,816,246	-		ECD_02686	0.26	+1.3
2,816,250	+		ECD_02686	0.26	+0.3
2,816,251	-		ECD_02686	0.26	+0.9
2,816,251	-		ECD_02686	0.26	+0.9
2,816,251	-		ECD_02686	0.26	+0.6
2,816,251	-		ECD_02686	0.26	+0.8
2,816,251	-		ECD_02686	0.26	+0.7
2,816,251	-		ECD_02686	0.26	+1.3
2,816,339	-		ECD_02686	0.33	+0.9
2,816,339	-		ECD_02686	0.33	+1.0
2,816,343	-		ECD_02686	0.34	+0.3
2,816,343	-		ECD_02686	0.34	+0.7
2,816,343	-		ECD_02686	0.34	+1.1
2,816,346	-		ECD_02686	0.34	+1.2
2,816,346	-		ECD_02686	0.34	+1.6
2,816,449	-		ECD_02686	0.42	+0.7
2,816,452	-		ECD_02686	0.42	+1.2
2,816,452	-		ECD_02686	0.42	+0.4
2,816,452	-		ECD_02686	0.42	+1.0
2,816,452	-		ECD_02686	0.42	+0.6
2,816,452	-		ECD_02686	0.42	+1.1
2,816,488	-		ECD_02686	0.45	+1.4
2,816,519	-		ECD_02686	0.48	+0.8
2,816,519	-		ECD_02686	0.48	+1.8
2,816,526	-		ECD_02686	0.48	+1.2
2,816,561	-		ECD_02686	0.51	+1.1
2,816,561	-		ECD_02686	0.51	+1.0
2,816,561	-		ECD_02686	0.51	+0.9
2,816,590	-		ECD_02686	0.53	+0.9
2,816,649	-		ECD_02686	0.58	+1.3
2,816,649	-		ECD_02686	0.58	+0.6
2,816,649	-		ECD_02686	0.58	+0.7
2,816,649	-		ECD_02686	0.58	+1.5
2,816,649	-		ECD_02686	0.58	+0.6
2,816,649	-		ECD_02686	0.58	-0.6
2,816,680	-		ECD_02686	0.60	+1.3
2,816,680	-		ECD_02686	0.60	-0.0
2,816,687	-		ECD_02686	0.61	+0.6
2,816,729	-		ECD_02686	0.64	+2.0
2,816,729	-		ECD_02686	0.64	+1.0
2,816,729	-		ECD_02686	0.64	+1.5
2,816,729	-		ECD_02686	0.64	+1.2
2,816,807	-		ECD_02686	0.70	+1.4