Strain Fitness in Escherichia coli BL21 around ECD_02541

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_10
2,651,584	+		ECD_02540	0.16	-1.1
2,651,584	+		ECD_02540	0.16	-1.0
2,651,584	+		ECD_02540	0.16	-1.2
2,651,584	+		ECD_02540	0.16	+0.3
2,651,584	+		ECD_02540	0.16	-0.6
2,651,584	+		ECD_02540	0.16	-2.4
2,651,752	+		ECD_02540	0.31	+0.6
2,651,752	+		ECD_02540	0.31	-0.5
2,651,776	+		ECD_02540	0.33	-1.9
2,651,819	+		ECD_02540	0.36	-0.8
2,651,820	-		ECD_02540	0.36	-0.6
2,651,933	+		ECD_02540	0.46	-0.1
2,651,933	+		ECD_02540	0.46	-1.1
2,651,933	+		ECD_02540	0.46	-0.4
2,651,933	+		ECD_02540	0.46	-2.3
2,651,933	+		ECD_02540	0.46	-1.1
2,651,933	+		ECD_02540	0.46	-0.8
2,651,933	+		ECD_02540	0.46	-1.9
2,651,933	+		ECD_02540	0.46	+1.0
2,651,933	+		ECD_02540	0.46	+0.0
2,651,933	+		ECD_02540	0.46	-1.3
2,651,933	+		ECD_02540	0.46	-1.0
2,651,933	+		ECD_02540	0.46	-0.3
2,651,934	-		ECD_02540	0.46	-1.8
2,651,934	-		ECD_02540	0.46	-1.8
2,651,934	-		ECD_02540	0.46	-1.0
2,651,934	-		ECD_02540	0.46	-1.4
2,651,934	-		ECD_02540	0.46	-1.7
2,651,965	+		ECD_02540	0.49	-0.6
2,651,965	+		ECD_02540	0.49	-1.5
2,651,965	+		ECD_02540	0.49	-0.0
2,652,009	+		ECD_02540	0.53	-1.9
2,652,009	+		ECD_02540	0.53	-0.2
2,652,009	+		ECD_02540	0.53	-0.6
2,652,009	+		ECD_02540	0.53	-2.8
2,652,009	+		ECD_02540	0.53	-2.3
2,652,009	+		ECD_02540	0.53	-1.6
2,652,013	+		ECD_02540	0.53	-1.0
2,652,037	+		ECD_02540	0.55	+0.5
2,652,037	+		ECD_02540	0.55	-1.4
2,652,038	-		ECD_02540	0.55	-2.1
2,652,043	+		ECD_02540	0.55	-1.2
2,652,043	+		ECD_02540	0.55	-1.3
2,652,043	+		ECD_02540	0.55	-0.2
2,652,043	+		ECD_02540	0.55	-1.4
2,652,043	+		ECD_02540	0.55	-1.1
2,652,043	+		ECD_02540	0.55	+0.5
2,652,044	-		ECD_02540	0.55	-1.3
2,652,065	+		ECD_02540	0.57	+0.5
2,652,065	+		ECD_02540	0.57	-0.9
2,652,145	+		ECD_02540	0.64	-0.4
2,652,145	+		ECD_02540	0.64	+0.3
2,652,145	+		ECD_02540	0.64	+0.3
2,652,145	+		ECD_02540	0.64	-1.0
2,652,145	+		ECD_02540	0.64	-0.7
2,652,145	+		ECD_02540	0.64	-1.4
2,652,145	+		ECD_02540	0.64	-0.2
2,652,145	+		ECD_02540	0.64	-0.5
2,652,145	+		ECD_02540	0.64	+0.3
2,652,145	+		ECD_02540	0.64	-2.7
2,652,145	+		ECD_02540	0.64	-0.9
2,652,145	+		ECD_02540	0.64	-1.2
2,652,145	+		ECD_02540	0.64	-1.9
2,652,146	-		ECD_02540	0.64	-1.3
2,652,146	-		ECD_02540	0.64	-1.4
2,652,146	-		ECD_02540	0.64	-2.3
2,652,146	-		ECD_02540	0.64	-1.9
2,652,187	+		ECD_02540	0.68	-0.1
2,652,211	+		ECD_02540	0.70	-0.7
2,652,212	-		ECD_02540	0.70	-2.7
2,652,223	+		ECD_02540	0.71	+0.2
2,652,223	+		ECD_02540	0.71	-0.3
2,652,223	+		ECD_02540	0.71	-0.9
2,652,224	-		ECD_02540	0.71	-0.6
2,652,245	+		ECD_02540	0.73	-0.7
2,652,245	+		ECD_02540	0.73	-0.5
2,652,245	+		ECD_02540	0.73	-1.7
2,652,245	+		ECD_02540	0.73	-0.4
2,652,245	+		ECD_02540	0.73	-0.1
2,652,245	+		ECD_02540	0.73	-0.8
2,652,283	+		ECD_02540	0.76	-0.8
2,652,430	+		ECD_02540	0.88	-1.7
2,652,431	-		ECD_02540	0.88	-2.0
2,652,453	+				-0.6
2,652,453	+				-0.1
2,652,463	+				-3.1
2,652,463	+				-2.7
2,652,463	+				-1.8
2,652,463	+				+0.9
2,652,463	+				-1.3
2,652,463	+				-0.4
2,652,463	+				-1.0
2,652,463	+				+1.1
2,652,468	+				-1.6
2,652,468	+				-0.7
2,652,468	+				-1.2
2,652,468	+				-2.9
2,652,468	+				-0.4
2,652,468	+				-0.4
2,652,468	+				-0.2
2,652,468	+				-0.8
2,652,468	+				-1.4
2,652,526	+				+0.0
2,652,526	+				-0.1
2,652,526	+				-2.2
2,652,526	+				+0.1
2,652,546	+				-1.4
2,652,546	+				+0.2
2,652,546	+				-0.3
2,652,890	+		ECD_02541	0.20	-1.1
2,652,890	+		ECD_02541	0.20	-1.6
2,652,891	-		ECD_02541	0.20	-1.1
2,652,891	-		ECD_02541	0.20	-1.3
2,652,958	+		ECD_02541	0.24	-1.4
2,652,958	+		ECD_02541	0.24	-0.8
2,652,958	+		ECD_02541	0.24	-0.8
2,652,968	+		ECD_02541	0.25	+0.1
2,652,968	+		ECD_02541	0.25	-0.3
2,652,968	+		ECD_02541	0.25	-1.7
2,652,968	+		ECD_02541	0.25	-1.0
2,652,972	+		ECD_02541	0.25	-1.1
2,652,972	+		ECD_02541	0.25	-1.9
2,653,059	+		ECD_02541	0.31	-2.1
2,653,059	+		ECD_02541	0.31	-0.3
2,653,059	+		ECD_02541	0.31	-0.1
2,653,060	-		ECD_02541	0.31	-1.3
2,653,061	+		ECD_02541	0.31	-1.1
2,653,061	+		ECD_02541	0.31	-2.7
2,653,061	+		ECD_02541	0.31	-0.8
2,653,061	+		ECD_02541	0.31	-2.3
2,653,075	-		ECD_02541	0.32	-2.1
2,653,075	-		ECD_02541	0.32	+0.1
2,653,211	+		ECD_02541	0.41	-2.2
2,653,283	+		ECD_02541	0.46	-1.4
2,653,409	+		ECD_02541	0.54	-1.8
2,653,422	+		ECD_02541	0.55	-0.4
2,653,422	+		ECD_02541	0.55	+0.8
2,653,422	+		ECD_02541	0.55	-1.5
2,653,423	+		ECD_02541	0.55	-2.4
2,653,424	+		ECD_02541	0.55	+0.9
2,653,424	+		ECD_02541	0.55	-0.4
2,653,424	+		ECD_02541	0.55	-0.1
2,653,424	+		ECD_02541	0.55	-0.9
2,653,424	+		ECD_02541	0.55	-0.7
2,653,424	+		ECD_02541	0.55	+0.0
2,653,424	+		ECD_02541	0.55	-0.3
2,653,424	+		ECD_02541	0.55	+0.8
2,653,424	+		ECD_02541	0.55	-0.6
2,653,424	+		ECD_02541	0.55	-0.5
2,653,425	-		ECD_02541	0.55	-1.8
2,653,425	-		ECD_02541	0.55	-1.6
2,653,431	+		ECD_02541	0.55	-1.4
2,653,431	+		ECD_02541	0.55	-1.3
2,653,591	+		ECD_02541	0.66	-0.6
2,653,604	+		ECD_02541	0.66	-1.4
2,653,607	+		ECD_02541	0.67	-1.3
2,653,607	+		ECD_02541	0.67	-1.3
2,653,607	+		ECD_02541	0.67	-2.3
2,653,607	+		ECD_02541	0.67	-0.7
2,653,607	+		ECD_02541	0.67	+1.2
2,653,607	+		ECD_02541	0.67	-2.2
2,653,607	+		ECD_02541	0.67	+0.2
2,653,607	+		ECD_02541	0.67	-0.2
2,653,607	+		ECD_02541	0.67	-0.3
2,653,607	+		ECD_02541	0.67	+0.1
2,653,607	+		ECD_02541	0.67	-2.5
2,653,607	+		ECD_02541	0.67	-2.8
2,653,607	+		ECD_02541	0.67	-2.6
2,653,607	+		ECD_02541	0.67	-1.6
2,653,607	+		ECD_02541	0.67	-2.7
2,653,608	-		ECD_02541	0.67	-2.1
2,653,608	-		ECD_02541	0.67	-0.6
2,653,608	-		ECD_02541	0.67	-0.6
2,653,608	-		ECD_02541	0.67	+0.0
2,653,611	+		ECD_02541	0.67	-1.6
2,653,626	+		ECD_02541	0.68	-0.4
2,653,638	+		ECD_02541	0.69	-0.6
2,653,640	+		ECD_02541	0.69	-0.9
2,653,640	+		ECD_02541	0.69	-1.4
2,653,655	+		ECD_02541	0.70	-0.5
2,653,788	-		ECD_02541	0.78	-3.4
2,653,920	+		ECD_02541	0.87	-1.0
2,653,920	+		ECD_02541	0.87	+0.8
2,653,920	+		ECD_02541	0.87	-1.0
2,653,920	+		ECD_02541	0.87	-1.1
2,653,920	+		ECD_02541	0.87	-0.4
2,654,003	+				-0.8
2,654,118	+				-1.3
2,654,118	+				-1.2
2,654,119	-				+0.7
2,654,119	-				-2.6
2,654,119	-				-0.6
2,654,119	-				-1.6
2,654,122	+				-1.3
2,654,122	+				-0.7
2,654,122	+				-0.8
2,654,122	+				-0.7
2,654,123	-				-0.9
2,654,123	-				-3.2
2,654,123	-				-1.8
2,654,129	-				+2.0
2,654,129	-				-1.0
2,654,161	+				-0.4
2,654,162	-				-0.7
2,654,162	-				-0.8
2,654,162	-				-0.6
2,654,173	+				-0.7
2,654,173	+				-2.1
2,654,173	+				-1.6
2,654,173	+				-3.0
2,654,173	+				+0.0
2,654,174	-				-0.4
2,654,174	-				-0.4
2,654,174	-				-0.4
2,654,174	-				-0.3
2,654,174	-				-2.0
2,654,178	+				+1.4
2,654,185	+				-1.7
2,654,185	+				-1.1
2,654,185	+				-1.1
2,654,185	+				-0.4
2,654,186	-				-1.3
2,654,186	-				-1.8
2,654,186	-				-1.8
2,654,186	-				-0.2
2,654,247	+		ECD_02542	0.12	-1.0
2,654,248	-		ECD_02542	0.12	-0.4
2,654,248	-		ECD_02542	0.12	-0.6
2,654,248	-		ECD_02542	0.12	-0.3
2,654,248	-		ECD_02542	0.12	-0.7
2,654,248	-		ECD_02542	0.12	-1.9
2,654,248	-		ECD_02542	0.12	-1.1
2,654,248	-		ECD_02542	0.12	-2.0
2,654,248	-		ECD_02542	0.12	-1.3
2,654,248	-		ECD_02542	0.12	-0.3
2,654,248	-		ECD_02542	0.12	-1.7
2,654,248	-		ECD_02542	0.12	-1.8
2,654,267	+		ECD_02542	0.16	-1.1
2,654,267	+		ECD_02542	0.16	-1.0
2,654,268	-		ECD_02542	0.16	+0.0
2,654,276	+		ECD_02542	0.18	-1.3
2,654,309	-		ECD_02542	0.24	-1.0
2,654,309	-		ECD_02542	0.24	-1.3
2,654,309	-		ECD_02542	0.24	-0.7
2,654,323	+		ECD_02542	0.27	-1.2
2,654,324	-		ECD_02542	0.27	-0.3
2,654,421	-		ECD_02542	0.46	+0.3
2,654,435	+		ECD_02542	0.49	-1.0
2,654,435	+		ECD_02542	0.49	-1.8
2,654,436	-		ECD_02542	0.49	+0.1
2,654,436	-		ECD_02542	0.49	+0.4
2,654,436	-		ECD_02542	0.49	+0.1
2,654,436	-		ECD_02542	0.49	+0.2
2,654,438	-		ECD_02542	0.49	+0.3
2,654,438	-		ECD_02542	0.49	-1.3
2,654,469	-		ECD_02542	0.55	-0.7
2,654,482	-		ECD_02542	0.58	-1.0
2,654,482	-		ECD_02542	0.58	+0.1
2,654,482	-		ECD_02542	0.58	-3.0
2,654,482	-		ECD_02542	0.58	+0.2
2,654,495	+		ECD_02542	0.60	-1.4
2,654,496	-		ECD_02542	0.60	+0.2
2,654,510	+		ECD_02542	0.63	-0.1
2,654,511	-		ECD_02542	0.63	+0.4
2,654,511	-		ECD_02542	0.63	-1.2
2,654,511	-		ECD_02542	0.63	-0.1
2,654,511	-		ECD_02542	0.63	-1.5
2,654,511	-		ECD_02542	0.63	-1.0
2,654,537	+		ECD_02542	0.68	-1.1
2,654,667	-				-1.3
2,654,667	-				-2.2
2,654,685	-				-0.7
2,654,685	-				+0.2
2,654,685	-				-0.3
2,654,685	-				-1.3
2,654,685	-				-0.4
2,654,685	-				-0.4
2,654,689	-				-1.5
2,654,689	-				-1.8
2,654,689	-				-0.4
2,654,689	-				-1.9
2,654,689	-				-1.3
2,654,689	-				-2.9
2,654,689	-				-1.2
2,654,689	-				+0.8
2,654,689	-				-1.0
2,654,689	-				-0.6
2,654,689	-				+0.3
2,654,689	-				+0.0
2,654,763	+				+0.1
2,654,763	+				-0.2
2,654,763	+				+0.2
2,654,763	+				+0.4
2,654,763	+				+0.1
2,654,763	+				+1.0
2,654,763	+				-0.1
2,654,764	-				-1.3
2,654,765	+				-0.5
2,654,765	+				+1.0
2,654,765	+				+0.6
2,654,765	+				+0.5
2,654,765	+				-0.7
2,654,765	+				+0.4
2,654,765	+				+1.3
2,654,765	+				-0.1
2,654,765	+				+0.3
2,654,765	+				+0.3
2,654,765	+				+0.2
2,654,766	-				-1.7
2,654,888	-				+0.3
2,654,989	+				+0.5
2,655,029	-		ECD_02543	0.12	-0.5
2,655,029	-		ECD_02543	0.12	-0.6
2,655,029	-		ECD_02543	0.12	-0.1
2,655,035	-		ECD_02543	0.12	+0.5
2,655,035	-		ECD_02543	0.12	-1.8
2,655,043	+		ECD_02543	0.12	-0.7
2,655,043	+		ECD_02543	0.12	-0.6
2,655,043	+		ECD_02543	0.12	+0.3
2,655,044	-		ECD_02543	0.13	+0.7
2,655,044	-		ECD_02543	0.13	-0.5
2,655,044	-		ECD_02543	0.13	+0.2
2,655,044	-		ECD_02543	0.13	-1.2
2,655,044	-		ECD_02543	0.13	-2.4
2,655,051	-		ECD_02543	0.13	-0.8
2,655,051	-		ECD_02543	0.13	+0.2
2,655,051	-		ECD_02543	0.13	+0.8
2,655,051	-		ECD_02543	0.13	+0.4
2,655,051	-		ECD_02543	0.13	+0.6
2,655,051	-		ECD_02543	0.13	-0.0
2,655,051	-		ECD_02543	0.13	+0.8
2,655,051	-		ECD_02543	0.13	+0.0
2,655,051	-		ECD_02543	0.13	-0.0
2,655,051	-		ECD_02543	0.13	-0.0
2,655,051	-		ECD_02543	0.13	-0.2
2,655,055	+		ECD_02543	0.13	-1.4
2,655,056	-		ECD_02543	0.13	-0.7
2,655,120	+		ECD_02543	0.17	+1.5
2,655,120	+		ECD_02543	0.17	-0.8