Strain Fitness in Escherichia coli BL21 around ECD_01494

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01493 and ECD_04319 are separated by 126 nucleotidesECD_04319 and ECD_01494 are separated by 218 nucleotidesECD_01494 and ECD_01495 are separated by 254 nucleotidesECD_01495 and ECD_01496 are separated by 275 nucleotides ECD_01493: ECD_01493 - putative transporter, at 1,570,628 to 1,571,815 _01493 ECD_04319: ECD_04319 - inner membrane-associated protein, at 1,571,942 to 1,572,037 _04319 ECD_01494: ECD_01494 - diguanylate cyclase, zinc-sensing, at 1,572,256 to 1,573,146 _01494 ECD_01495: ECD_01495 - hydrogen peroxide resistance OB fold protein; putative periplasmic protein, at 1,573,401 to 1,573,793 _01495 ECD_01496: ECD_01496 - inactive PncC family protein, at 1,574,069 to 1,574,587 _01496 Position (kb) 1572 1573 1574Strain fitness (log2 ratio) -1 0 1at 1572.048 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus HD100_10
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1,572,048 + +0.8

Or see this region's nucleotide sequence