Strain Fitness in Escherichia coli BL21 around ECD_03283

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_1
3,431,553	+		ECD_03282	0.29	-0.6
3,431,554	-		ECD_03282	0.29	-0.3
3,431,554	-		ECD_03282	0.29	-0.2
3,431,580	+		ECD_03282	0.31	-1.0
3,431,580	+		ECD_03282	0.31	-0.6
3,431,581	-		ECD_03282	0.31	+0.7
3,431,584	+		ECD_03282	0.31	-1.3
3,431,584	+		ECD_03282	0.31	-1.4
3,431,585	-		ECD_03282	0.31	-0.6
3,431,715	+		ECD_03282	0.41	-1.8
3,431,809	-		ECD_03282	0.48	+0.0
3,431,809	-		ECD_03282	0.48	+0.2
3,431,809	-		ECD_03282	0.48	+0.1
3,431,832	+		ECD_03282	0.50	-0.5
3,431,833	-		ECD_03282	0.50	+0.1
3,431,833	-		ECD_03282	0.50	-0.8
3,431,833	-		ECD_03282	0.50	-0.1
3,431,833	-		ECD_03282	0.50	-0.0
3,431,836	+		ECD_03282	0.50	-1.0
3,431,843	-		ECD_03282	0.51	-0.5
3,431,939	-		ECD_03282	0.58	-0.5
3,431,977	+		ECD_03282	0.61	-1.0
3,431,977	+		ECD_03282	0.61	+0.5
3,431,977	+		ECD_03282	0.61	-0.2
3,431,978	-		ECD_03282	0.61	-1.9
3,432,026	-		ECD_03282	0.65	-0.1
3,432,034	-		ECD_03282	0.66	+0.5
3,432,045	+		ECD_03282	0.67	-0.9
3,432,046	-		ECD_03282	0.67	-0.5
3,432,046	-		ECD_03282	0.67	-0.9
3,432,046	-		ECD_03282	0.67	-1.0
3,432,046	-		ECD_03282	0.67	-0.7
3,432,046	-		ECD_03282	0.67	-0.5
3,432,046	-		ECD_03282	0.67	-1.5
3,432,049	+		ECD_03282	0.67	-1.0
3,432,050	-		ECD_03282	0.67	+0.7
3,432,050	-		ECD_03282	0.67	-0.8
3,432,050	-		ECD_03282	0.67	-0.6
3,432,050	-		ECD_03282	0.67	-0.7
3,432,085	+		ECD_03282	0.70	+0.0
3,432,085	+		ECD_03282	0.70	-1.8
3,432,086	-		ECD_03282	0.70	-0.6
3,432,088	-		ECD_03282	0.70	-0.4
3,432,088	-		ECD_03282	0.70	-0.2
3,432,206	-		ECD_03282	0.79	-0.4
3,432,301	+		ECD_03282	0.86	-0.8
3,432,301	+		ECD_03282	0.86	-0.8
3,432,449	+				-1.4
3,432,450	-				-0.9
3,432,450	-				+0.2
3,432,450	-				-0.0
3,432,450	-				-0.1
3,432,473	-				-0.6
3,432,482	+				-0.5
3,432,482	+				-1.4
3,432,483	-				+0.1
3,432,483	-				-0.5
3,432,483	-				-0.6
3,432,604	+				-1.1
3,432,710	-		ECD_03283	0.11	+0.3
3,432,789	+		ECD_03283	0.15	-0.5
3,432,790	-		ECD_03283	0.15	+0.4
3,432,808	+		ECD_03283	0.16	-0.1
3,432,865	+		ECD_03283	0.19	-0.1
3,432,884	+		ECD_03283	0.20	-0.7
3,432,935	-		ECD_03283	0.22	+1.3
3,433,018	-		ECD_03283	0.26	-0.1
3,433,035	+		ECD_03283	0.27	-0.4
3,433,035	+		ECD_03283	0.27	-0.5
3,433,036	-		ECD_03283	0.27	-0.4
3,433,036	-		ECD_03283	0.27	-0.3
3,433,047	+		ECD_03283	0.28	-0.4
3,433,104	+		ECD_03283	0.31	+0.3
3,433,188	+		ECD_03283	0.35	-0.3
3,433,189	-		ECD_03283	0.35	+0.4
3,433,250	+		ECD_03283	0.38	+0.1
3,433,250	+		ECD_03283	0.38	-0.7
3,433,250	+		ECD_03283	0.38	-0.9
3,433,251	-		ECD_03283	0.38	+0.0
3,433,251	-		ECD_03283	0.38	-0.8
3,433,251	-		ECD_03283	0.38	-0.1
3,433,331	+		ECD_03283	0.42	-0.7
3,433,367	-		ECD_03283	0.44	-1.0
3,433,495	+		ECD_03283	0.51	-1.5
3,433,524	-		ECD_03283	0.52	-0.0
3,433,601	-		ECD_03283	0.56	-0.0
3,433,607	+		ECD_03283	0.56	-0.5
3,433,610	+		ECD_03283	0.56	-1.8
3,433,610	+		ECD_03283	0.56	-0.4
3,433,611	-		ECD_03283	0.56	-0.0
3,433,611	-		ECD_03283	0.56	+0.1
3,433,611	-		ECD_03283	0.56	-0.5
3,433,611	-		ECD_03283	0.56	+0.3
3,433,614	+		ECD_03283	0.57	-0.8
3,433,614	+		ECD_03283	0.57	-0.3
3,433,615	-		ECD_03283	0.57	-0.2
3,433,615	-		ECD_03283	0.57	-0.5
3,433,672	-		ECD_03283	0.60	+0.5
3,433,773	-		ECD_03283	0.65	+0.2
3,433,808	+		ECD_03283	0.66	-1.4
3,433,809	-		ECD_03283	0.67	-1.2
3,433,817	+		ECD_03283	0.67	-0.8
3,433,821	+		ECD_03283	0.67	-0.8
3,433,821	+		ECD_03283	0.67	+0.3
3,433,821	+		ECD_03283	0.67	-0.5
3,433,822	-		ECD_03283	0.67	-0.1
3,433,822	-		ECD_03283	0.67	-0.3
3,433,822	-		ECD_03283	0.67	+0.5
3,433,822	-		ECD_03283	0.67	+0.2
3,433,941	+		ECD_03283	0.73	-0.2
3,433,941	+		ECD_03283	0.73	-0.2
3,433,942	-		ECD_03283	0.73	-0.3
3,433,942	-		ECD_03283	0.73	-0.3
3,433,943	+		ECD_03283	0.73	-0.2
3,433,944	-		ECD_03283	0.73	+0.0
3,433,944	-		ECD_03283	0.73	-0.2
3,433,944	-		ECD_03283	0.73	+0.1
3,433,944	-		ECD_03283	0.73	-0.2
3,433,982	+		ECD_03283	0.75	-0.3
3,433,982	+		ECD_03283	0.75	-0.5
3,433,983	-		ECD_03283	0.75	-0.6
3,434,010	-		ECD_03283	0.77	-0.0
3,434,010	-		ECD_03283	0.77	+0.3
3,434,010	-		ECD_03283	0.77	-0.6
3,434,010	-		ECD_03283	0.77	+0.3
3,434,010	-		ECD_03283	0.77	-0.9
3,434,063	+		ECD_03283	0.79	-0.7
3,434,063	+		ECD_03283	0.79	-0.4
3,434,064	-		ECD_03283	0.79	+0.6
3,434,128	-		ECD_03283	0.83	-0.4
3,434,128	-		ECD_03283	0.83	-0.5
3,434,128	-		ECD_03283	0.83	+0.3
3,434,292	-				-0.2
3,434,292	-				-0.3
3,434,424	-				+0.1
3,434,424	-				+0.3
3,434,492	+				+0.0
3,434,493	-				+0.0
3,434,563	-				+0.5
3,434,586	-				-0.2
3,434,586	-				+0.6
3,434,596	+				-1.4
3,434,597	-				-0.2
3,434,612	+				-1.8
3,434,659	+				-0.6
3,434,688	-		ECD_03284	0.10	-0.8
3,434,813	+		ECD_03284	0.16	+1.2
3,434,813	+		ECD_03284	0.16	-0.1
3,434,824	+		ECD_03284	0.16	+0.5
3,434,825	-		ECD_03284	0.16	-0.1
3,434,959	-		ECD_03284	0.23	+0.0
3,434,959	-		ECD_03284	0.23	+0.2
3,434,959	-		ECD_03284	0.23	-0.5
3,434,992	+		ECD_03284	0.24	-0.7
3,434,992	+		ECD_03284	0.24	-1.1
3,434,993	-		ECD_03284	0.24	-0.1
3,434,995	+		ECD_03284	0.24	-0.4
3,434,995	+		ECD_03284	0.24	-0.7
3,434,995	+		ECD_03284	0.24	-0.7
3,434,996	-		ECD_03284	0.24	-0.0
3,434,996	-		ECD_03284	0.24	-0.9
3,435,109	+		ECD_03284	0.29	-2.0
3,435,109	+		ECD_03284	0.29	-1.1
3,435,110	-		ECD_03284	0.29	-0.2
3,435,110	-		ECD_03284	0.29	+0.1
3,435,148	+		ECD_03284	0.31	-0.6
3,435,157	+		ECD_03284	0.32	-0.8
3,435,178	+		ECD_03284	0.33	-0.7
3,435,178	+		ECD_03284	0.33	-1.4
3,435,178	+		ECD_03284	0.33	-1.2
3,435,178	+		ECD_03284	0.33	-0.9
3,435,179	-		ECD_03284	0.33	-0.9
3,435,179	-		ECD_03284	0.33	-0.6
3,435,179	-		ECD_03284	0.33	-0.6
3,435,217	+		ECD_03284	0.34	-0.3
3,435,218	-		ECD_03284	0.34	+0.1
3,435,320	+		ECD_03284	0.39	-1.3
3,435,321	-		ECD_03284	0.39	+0.8
3,435,330	-		ECD_03284	0.40	-0.7
3,435,330	-		ECD_03284	0.40	-0.6
3,435,333	-		ECD_03284	0.40	+0.5
3,435,333	-		ECD_03284	0.40	-0.2
3,435,333	-		ECD_03284	0.40	-0.5
3,435,409	+		ECD_03284	0.43	-0.9
3,435,459	-		ECD_03284	0.45	-0.3