Strain Fitness in Escherichia coli BL21 around ECD_02661

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_1
2,780,621	-		ECD_02659	0.75	+0.9
2,780,855	-				-1.4
2,780,855	-				-1.6
2,780,868	-				+0.2
2,780,904	-				-0.2
2,780,950	+				+0.7
2,780,960	+				-0.2
2,780,960	+				-1.1
2,780,960	+				+0.4
2,780,960	+				+0.4
2,780,960	+				+0.8
2,780,960	+				+0.5
2,780,961	-				+1.5
2,780,964	+				+0.8
2,780,964	+				+1.0
2,780,964	+				+0.1
2,780,964	+				+1.1
2,780,964	+				+0.6
2,780,964	+				+0.2
2,780,964	+				+0.5
2,780,964	+				+1.3
2,780,964	+				-0.2
2,780,964	+				+1.4
2,780,964	+				+1.6
2,780,964	+				+0.8
2,780,964	+				+1.2
2,780,965	-				-1.4
2,780,966	+				+2.2
2,780,966	+				+1.5
2,781,035	+				+0.5
2,781,035	+				+1.6
2,781,091	+				+1.6
2,781,091	+				+2.1
2,781,091	+				+2.0
2,781,100	+				+1.9
2,781,119	+				+2.4
2,781,119	+				+1.7
2,781,119	+				+0.1
2,781,119	+				+1.8
2,781,125	+				+1.4
2,781,125	+				+2.2
2,781,125	+				+0.8
2,781,125	+				+1.4
2,781,125	+				+2.3
2,781,125	+				+1.5
2,781,125	+				+0.8
2,781,125	+				+1.4
2,781,140	+				+2.3
2,781,147	+				+1.4
2,781,147	+				+1.3
2,781,147	+				+2.8
2,781,152	+				+2.6
2,781,152	+				+2.5
2,781,152	+				+2.2
2,781,152	+				+2.2
2,781,152	+				+2.6
2,781,152	+				+1.4
2,781,152	+				+2.3
2,781,152	+				+1.5
2,781,152	+				+1.2
2,781,162	+				+1.7
2,781,162	+				+1.3
2,781,162	+				+2.3
2,781,162	+				+2.3
2,781,199	+				-1.0
2,781,199	+				-0.7
2,781,199	+				-0.3
2,781,199	+				-1.5
2,781,269	+		ECD_02660	0.31	-1.5
2,781,269	+		ECD_02660	0.31	-0.2
2,781,271	+		ECD_02660	0.32	-0.8
2,781,271	+		ECD_02660	0.32	-1.0
2,781,271	+		ECD_02660	0.32	-0.7
2,781,271	+		ECD_02660	0.32	-0.8
2,781,271	+		ECD_02660	0.32	-0.2
2,781,282	-		ECD_02660	0.37	-0.5
2,781,326	+		ECD_02660	0.56	-1.0
2,781,326	+		ECD_02660	0.56	-0.7
2,781,326	+		ECD_02660	0.56	-0.3
2,781,326	+		ECD_02660	0.56	-1.1
2,781,326	+		ECD_02660	0.56	-0.9
2,781,327	-		ECD_02660	0.57	-0.7
2,781,327	-		ECD_02660	0.57	-1.8
2,781,327	-		ECD_02660	0.57	+0.0
2,781,327	-		ECD_02660	0.57	-0.7
2,781,327	-		ECD_02660	0.57	-0.6
2,781,327	-		ECD_02660	0.57	-1.3
2,781,352	+		ECD_02660	0.68	-0.9
2,781,352	+		ECD_02660	0.68	-0.2
2,781,352	+		ECD_02660	0.68	-0.8
2,781,353	-		ECD_02660	0.68	-1.6
2,781,353	-		ECD_02660	0.68	-1.2
2,781,353	-		ECD_02660	0.68	+1.0
2,781,392	+		ECD_02660	0.85	-1.2
2,781,393	-		ECD_02660	0.86	+0.0
2,781,405	-				-1.2
2,781,438	-				+0.0
2,781,460	-				+0.3
2,781,462	+				+0.3
2,781,462	+				-0.1
2,781,469	+				-0.2
2,781,483	+				-1.1
2,781,505	+				-0.1
2,781,505	+				-0.5
2,781,506	-				-0.2
2,781,506	-				-0.0
2,781,510	+				+0.9
2,781,510	+				-1.0
2,781,511	-				+0.4
2,781,511	-				-0.1
2,781,567	+				-0.4
2,781,567	+				+0.4
2,781,567	+				+0.6
2,781,568	-				-1.7
2,781,568	-				-0.1
2,781,613	+				+0.0
2,781,664	-				-1.2
2,781,664	-				-1.3
2,781,680	+				+0.3
2,781,681	-				+0.7
2,781,743	+		ECD_02661	0.10	+1.0
2,781,743	+		ECD_02661	0.10	-0.0
2,781,744	-		ECD_02661	0.11	-0.6
2,781,744	-		ECD_02661	0.11	-0.6
2,781,840	+		ECD_02661	0.18	-0.6
2,781,840	+		ECD_02661	0.18	+0.9
2,781,840	+		ECD_02661	0.18	-0.8
2,781,841	-		ECD_02661	0.19	-1.2
2,781,841	-		ECD_02661	0.19	+0.1
2,781,859	+		ECD_02661	0.20	-1.0
2,781,860	-		ECD_02661	0.20	-1.1
2,781,860	-		ECD_02661	0.20	-3.4
2,781,865	+		ECD_02661	0.21	+1.1
2,781,917	+		ECD_02661	0.25	+0.2
2,781,917	+		ECD_02661	0.25	+0.7
2,781,918	-		ECD_02661	0.25	+1.4
2,781,952	+		ECD_02661	0.28	-0.0
2,782,087	+		ECD_02661	0.39	+1.5
2,782,087	+		ECD_02661	0.39	+0.1
2,782,165	+		ECD_02661	0.45	+0.3
2,782,314	-		ECD_02661	0.58	-1.8
2,782,455	+		ECD_02661	0.69	-0.2
2,782,455	+		ECD_02661	0.69	+0.5
2,782,490	+		ECD_02661	0.72	+0.1
2,782,522	+		ECD_02661	0.75	-0.0
2,782,528	-		ECD_02661	0.76	-2.7
2,782,630	+		ECD_02661	0.84	+0.6
2,782,636	+		ECD_02661	0.84	+0.6
2,782,659	-		ECD_02661	0.86	-2.1
2,782,663	+		ECD_02661	0.87	+1.1
2,782,751	+				+0.8
2,782,751	+				+0.9
2,782,751	+				+0.8
2,782,751	+				+0.9
2,782,751	+				+0.1
2,782,751	+				+0.1
2,782,751	+				+0.1
2,782,753	+				+0.7
2,782,753	+				+0.1
2,782,753	+				+0.3
2,782,753	+				+0.7
2,782,753	+				+0.3
2,782,753	+				+0.3
2,782,753	+				-1.0
2,782,753	+				-1.0
2,782,753	+				-0.1
2,782,753	+				-0.5
2,782,754	-				-1.4
2,782,754	-				-0.5
2,782,754	-				-1.8
2,782,754	-				-1.2
2,782,754	-				-0.3
2,782,754	-				-1.5
2,782,754	-				+0.1
2,782,756	+				+0.7
2,782,756	+				-0.9
2,782,756	+				+0.7
2,782,756	+				-0.0
2,782,757	-				-0.9
2,782,757	-				-1.0
2,782,809	+				-0.2
2,782,809	+				+0.5
2,782,887	+		ECD_02662	0.15	-1.4
2,782,888	-		ECD_02662	0.15	-2.6
2,782,888	-		ECD_02662	0.15	+2.1
2,782,917	+		ECD_02662	0.21	+0.5
2,782,917	+		ECD_02662	0.21	-0.5
2,782,918	-		ECD_02662	0.22	-2.3
2,782,921	+		ECD_02662	0.22	+0.3
2,782,921	+		ECD_02662	0.22	+0.5
2,782,921	+		ECD_02662	0.22	+0.9
2,782,922	-		ECD_02662	0.23	-1.7
2,782,986	+		ECD_02662	0.37	-0.9
2,782,987	-		ECD_02662	0.37	-1.7
2,783,026	+		ECD_02662	0.46	-0.4
2,783,028	+		ECD_02662	0.46	+1.0
2,783,028	+		ECD_02662	0.46	+0.8
2,783,028	+		ECD_02662	0.46	+0.5
2,783,028	+		ECD_02662	0.46	+0.1
2,783,028	+		ECD_02662	0.46	+0.2
2,783,028	+		ECD_02662	0.46	+0.0
2,783,028	+		ECD_02662	0.46	-0.4
2,783,028	+		ECD_02662	0.46	+0.5
2,783,028	+		ECD_02662	0.46	+0.7
2,783,028	+		ECD_02662	0.46	-0.1
2,783,028	+		ECD_02662	0.46	+0.1
2,783,028	+		ECD_02662	0.46	+0.4
2,783,028	+		ECD_02662	0.46	+0.8
2,783,028	+		ECD_02662	0.46	-0.1
2,783,028	+		ECD_02662	0.46	+1.2
2,783,028	+		ECD_02662	0.46	-0.3
2,783,028	+		ECD_02662	0.46	-0.2
2,783,028	+		ECD_02662	0.46	-0.3
2,783,028	+		ECD_02662	0.46	-0.5
2,783,028	+		ECD_02662	0.46	+0.0
2,783,028	+		ECD_02662	0.46	+3.1
2,783,028	+		ECD_02662	0.46	+0.1
2,783,028	+		ECD_02662	0.46	-0.9
2,783,028	+		ECD_02662	0.46	-0.3
2,783,028	+		ECD_02662	0.46	+0.0
2,783,028	+		ECD_02662	0.46	-0.2
2,783,028	+		ECD_02662	0.46	+0.9
2,783,029	-		ECD_02662	0.47	-0.9
2,783,029	-		ECD_02662	0.47	-2.2
2,783,029	-		ECD_02662	0.47	-1.5
2,783,029	-		ECD_02662	0.47	-2.1
2,783,029	-		ECD_02662	0.47	-0.8
2,783,029	-		ECD_02662	0.47	-2.0
2,783,029	-		ECD_02662	0.47	-2.6
2,783,029	-		ECD_02662	0.47	-1.4
2,783,029	-		ECD_02662	0.47	-0.7
2,783,029	-		ECD_02662	0.47	-1.5
2,783,183	+		ECD_02662	0.81	+0.9
2,783,183	+		ECD_02662	0.81	+0.5
2,783,184	-		ECD_02662	0.82	-4.1
2,783,184	-		ECD_02662	0.82	-1.2
2,783,219	+		ECD_02662	0.89	-0.6
2,783,219	+		ECD_02662	0.89	+0.0
2,783,264	-				-1.3
2,783,264	-				-0.6
2,783,489	-		ECD_02663	0.21	-0.1
2,783,505	-		ECD_02663	0.23	+0.5
2,783,505	-		ECD_02663	0.23	+1.4
2,783,538	-		ECD_02663	0.28	+0.6
2,783,687	+		ECD_02663	0.46	-1.3
2,783,701	+		ECD_02663	0.48	-1.5
2,783,702	-		ECD_02663	0.48	+0.3
2,783,702	-		ECD_02663	0.48	+0.8
2,783,727	+		ECD_02663	0.51	-0.1
2,783,728	-		ECD_02663	0.51	-0.1
2,783,752	+		ECD_02663	0.54	-0.5
2,783,753	-		ECD_02663	0.54	-0.1
2,783,759	-		ECD_02663	0.55	-0.4
2,783,771	+		ECD_02663	0.56	-2.5
2,783,771	+		ECD_02663	0.56	+0.7
2,783,772	-		ECD_02663	0.57	+0.5
2,783,772	-		ECD_02663	0.57	-0.5
2,783,772	-		ECD_02663	0.57	-0.3
2,783,772	-		ECD_02663	0.57	+0.6
2,783,772	-		ECD_02663	0.57	-0.5
2,783,772	-		ECD_02663	0.57	-0.0
2,783,772	-		ECD_02663	0.57	-0.3
2,783,772	-		ECD_02663	0.57	+1.1
2,783,772	-		ECD_02663	0.57	+0.3
2,783,772	-		ECD_02663	0.57	-1.0
2,783,773	+		ECD_02663	0.57	+0.1
2,783,773	+		ECD_02663	0.57	-2.4
2,783,774	-		ECD_02663	0.57	+0.1
2,783,774	-		ECD_02663	0.57	+0.3
2,783,774	-		ECD_02663	0.57	-0.4
2,783,774	-		ECD_02663	0.57	-0.2
2,783,782	-		ECD_02663	0.58	-0.2
2,783,818	-		ECD_02663	0.62	-0.1