Strain Fitness in Escherichia coli BL21 around ECD_02611

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_1
2,723,865	-		ECD_02609	0.89	-0.8
2,723,865	-		ECD_02609	0.89	-1.0
2,723,869	-		ECD_02609	0.89	-0.6
2,723,869	-		ECD_02609	0.89	-0.1
2,724,068	-				+0.4
2,724,078	-				+0.2
2,724,113	-				-0.0
2,724,130	-				+0.2
2,724,130	-				+0.2
2,724,179	-				-1.0
2,724,195	-				-2.6
2,724,314	+				-0.7
2,724,314	+				-1.6
2,724,366	-				-0.4
2,724,374	+				-2.2
2,724,374	+				-1.1
2,724,395	+				-0.5
2,724,449	+		ECD_02610	0.20	-0.4
2,724,449	+		ECD_02610	0.20	+0.7
2,724,479	+		ECD_02610	0.28	-0.9
2,724,547	+		ECD_02610	0.47	-0.4
2,724,547	+		ECD_02610	0.47	+0.0
2,724,570	+		ECD_02610	0.53	-0.2
2,724,570	+		ECD_02610	0.53	+0.6
2,724,570	+		ECD_02610	0.53	+0.1
2,724,570	+		ECD_02610	0.53	-0.8
2,724,571	-		ECD_02610	0.54	-1.5
2,724,571	-		ECD_02610	0.54	-1.1
2,724,571	-		ECD_02610	0.54	-1.0
2,724,592	-		ECD_02610	0.59	-0.9
2,724,602	+		ECD_02610	0.62	-0.5
2,724,603	-		ECD_02610	0.62	-2.2
2,724,697	+		ECD_02610	0.88	+0.3
2,724,697	+		ECD_02610	0.88	-0.0
2,724,697	+		ECD_02610	0.88	+0.2
2,724,722	+				+0.3
2,724,722	+				-0.4
2,724,722	+				-0.0
2,724,722	+				+0.2
2,724,723	-				-1.5
2,724,723	-				-0.6
2,724,723	-				-0.7
2,724,726	+				+0.2
2,724,726	+				-1.6
2,724,727	-				-0.8
2,724,727	-				-0.4
2,724,741	+				-0.3
2,724,741	+				-0.8
2,724,741	+				+1.1
2,724,742	-				-1.2
2,724,770	-				-2.9
2,724,773	+				-0.4
2,724,773	+				-0.2
2,724,779	+				+0.4
2,724,784	+				+0.2
2,724,839	-				-4.2
2,724,841	+				+0.2
2,724,841	+				-0.4
2,724,841	+				-0.1
2,724,841	+				-0.4
2,724,841	+				-0.2
2,724,841	+				-0.8
2,724,841	+				+0.9
2,724,842	-				-1.8
2,724,844	+				+0.5
2,724,844	+				+0.7
2,724,856	+				-0.3
2,724,964	-		ECD_02611	0.11	-1.6
2,724,965	+		ECD_02611	0.12	-1.8
2,724,965	+		ECD_02611	0.12	-2.8
2,724,965	+		ECD_02611	0.12	-2.6
2,724,965	+		ECD_02611	0.12	-3.6
2,724,965	+		ECD_02611	0.12	-0.2
2,724,965	+		ECD_02611	0.12	-3.5
2,724,965	+		ECD_02611	0.12	-3.6
2,724,965	+		ECD_02611	0.12	-0.3
2,724,965	+		ECD_02611	0.12	-2.4
2,724,965	+		ECD_02611	0.12	-1.6
2,724,965	+		ECD_02611	0.12	-1.2
2,724,965	+		ECD_02611	0.12	-1.8
2,724,965	+		ECD_02611	0.12	-0.6
2,724,965	+		ECD_02611	0.12	-2.4
2,724,966	-		ECD_02611	0.12	+1.2
2,724,966	-		ECD_02611	0.12	-0.3
2,724,966	-		ECD_02611	0.12	-1.3
2,724,966	-		ECD_02611	0.12	-1.9
2,724,966	-		ECD_02611	0.12	-0.4
2,724,966	-		ECD_02611	0.12	-0.7
2,724,967	+		ECD_02611	0.12	-5.0
2,724,967	+		ECD_02611	0.12	+0.2
2,724,967	+		ECD_02611	0.12	-1.6
2,725,087	-		ECD_02611	0.21	-1.2
2,725,113	+		ECD_02611	0.23	-0.3
2,725,113	+		ECD_02611	0.23	-0.9
2,725,113	+		ECD_02611	0.23	-0.8
2,725,113	+		ECD_02611	0.23	+0.5
2,725,113	+		ECD_02611	0.23	-0.4
2,725,113	+		ECD_02611	0.23	-0.4
2,725,113	+		ECD_02611	0.23	+0.2
2,725,113	+		ECD_02611	0.23	-0.6
2,725,114	-		ECD_02611	0.23	-0.9
2,725,114	-		ECD_02611	0.23	+0.8
2,725,114	-		ECD_02611	0.23	-0.5
2,725,114	-		ECD_02611	0.23	-1.3
2,725,114	-		ECD_02611	0.23	-0.5
2,725,116	+		ECD_02611	0.23	+0.4
2,725,116	+		ECD_02611	0.23	-0.2
2,725,116	+		ECD_02611	0.23	-0.8
2,725,116	+		ECD_02611	0.23	-1.3
2,725,116	+		ECD_02611	0.23	+0.3
2,725,116	+		ECD_02611	0.23	+0.4
2,725,117	-		ECD_02611	0.24	-0.9
2,725,117	-		ECD_02611	0.24	-0.7
2,725,117	-		ECD_02611	0.24	-1.3
2,725,117	-		ECD_02611	0.24	-0.1
2,725,117	-		ECD_02611	0.24	-0.3
2,725,117	-		ECD_02611	0.24	-0.9
2,725,117	-		ECD_02611	0.24	+1.4
2,725,202	+		ECD_02611	0.30	-0.5
2,725,202	+		ECD_02611	0.30	-0.6
2,725,202	+		ECD_02611	0.30	-2.8
2,725,202	+		ECD_02611	0.30	-0.3
2,725,202	+		ECD_02611	0.30	-2.0
2,725,203	-		ECD_02611	0.30	-0.8
2,725,203	-		ECD_02611	0.30	-1.4
2,725,203	-		ECD_02611	0.30	-0.3
2,725,203	-		ECD_02611	0.30	-1.2
2,725,203	-		ECD_02611	0.30	+0.2
2,725,203	-		ECD_02611	0.30	+0.2
2,725,203	-		ECD_02611	0.30	-0.8
2,725,479	-		ECD_02611	0.52	-1.8
2,725,480	+		ECD_02611	0.52	-0.4
2,725,480	+		ECD_02611	0.52	-0.1
2,725,480	+		ECD_02611	0.52	-1.1
2,725,481	-		ECD_02611	0.52	-0.4
2,725,481	-		ECD_02611	0.52	-1.3
2,725,481	-		ECD_02611	0.52	-1.4
2,725,481	-		ECD_02611	0.52	-2.3
2,725,481	-		ECD_02611	0.52	-1.9
2,725,483	+		ECD_02611	0.52	-0.2
2,725,600	+		ECD_02611	0.61	-1.8
2,725,625	+		ECD_02611	0.63	-0.6
2,725,625	+		ECD_02611	0.63	+0.0
2,725,625	+		ECD_02611	0.63	+0.4
2,725,625	+		ECD_02611	0.63	-0.3
2,725,625	+		ECD_02611	0.63	-0.5
2,725,625	+		ECD_02611	0.63	-0.6
2,725,625	+		ECD_02611	0.63	-0.2
2,725,626	-		ECD_02611	0.64	-1.0
2,725,626	-		ECD_02611	0.64	-2.2
2,725,626	-		ECD_02611	0.64	+1.2
2,725,626	-		ECD_02611	0.64	-0.9
2,725,626	-		ECD_02611	0.64	-0.1
2,725,626	-		ECD_02611	0.64	-2.0
2,725,756	+		ECD_02611	0.74	-2.8
2,725,798	-		ECD_02611	0.77	-1.6
2,725,798	-		ECD_02611	0.77	-2.2
2,725,809	-		ECD_02611	0.78	-1.6
2,725,842	-		ECD_02611	0.81	+0.4
2,725,855	-		ECD_02611	0.82	-1.1
2,725,855	-		ECD_02611	0.82	+1.7
2,725,881	+		ECD_02611	0.84	-2.6
2,725,882	-		ECD_02611	0.84	+1.2
2,725,929	-		ECD_02611	0.87	-0.8
2,725,933	+		ECD_02611	0.88	+1.3
2,725,933	+		ECD_02611	0.88	-0.7
2,725,933	+		ECD_02611	0.88	-2.4
2,725,934	-		ECD_02611	0.88	-0.6
2,725,948	-		ECD_02611	0.89	+0.0
2,725,958	-		ECD_02611	0.90	-0.7
2,725,958	-		ECD_02611	0.90	+1.0
2,725,958	-		ECD_02611	0.90	-1.0
2,725,987	+				-0.2
2,726,014	-				-0.1
2,726,028	+				-1.8
2,726,028	+				-1.0
2,726,028	+				-1.0
2,726,087	+				-0.3
2,726,214	+		ECD_02612	0.51	-0.8
2,726,214	+		ECD_02612	0.51	-2.1
2,726,214	+		ECD_02612	0.51	-0.8
2,726,214	+		ECD_02612	0.51	-0.1
2,726,219	+		ECD_02612	0.53	-1.1
2,726,219	+		ECD_02612	0.53	-1.4
2,726,219	+		ECD_02612	0.53	-0.3
2,726,219	+		ECD_02612	0.53	-1.2
2,726,219	+		ECD_02612	0.53	-2.0
2,726,219	+		ECD_02612	0.53	-1.2
2,726,219	+		ECD_02612	0.53	-1.2
2,726,219	+		ECD_02612	0.53	-1.2
2,726,219	+		ECD_02612	0.53	-1.2
2,726,219	+		ECD_02612	0.53	+0.6
2,726,219	+		ECD_02612	0.53	-0.6
2,726,220	-		ECD_02612	0.54	+0.1
2,726,220	-		ECD_02612	0.54	+0.6
2,726,220	-		ECD_02612	0.54	-0.5
2,726,220	-		ECD_02612	0.54	-0.7
2,726,220	-		ECD_02612	0.54	-1.0
2,726,220	-		ECD_02612	0.54	+0.5
2,726,220	-		ECD_02612	0.54	-1.0
2,726,220	-		ECD_02612	0.54	-0.5
2,726,220	-		ECD_02612	0.54	-0.9
2,726,220	-		ECD_02612	0.54	-0.4
2,726,223	+		ECD_02612	0.55	-0.2
2,726,223	+		ECD_02612	0.55	-1.4
2,726,223	+		ECD_02612	0.55	-0.5
2,726,223	+		ECD_02612	0.55	-1.0
2,726,223	+		ECD_02612	0.55	+0.2
2,726,224	-		ECD_02612	0.55	-1.3
2,726,224	-		ECD_02612	0.55	-0.9
2,726,224	-		ECD_02612	0.55	-0.3
2,726,224	-		ECD_02612	0.55	-0.2
2,726,224	-		ECD_02612	0.55	-0.0
2,726,231	-		ECD_02612	0.58	-0.4
2,726,285	+		ECD_02612	0.79	-1.0
2,726,285	+		ECD_02612	0.79	-0.6
2,726,285	+		ECD_02612	0.79	-2.4
2,726,285	+		ECD_02612	0.79	-1.0
2,726,285	+		ECD_02612	0.79	+0.1
2,726,285	+		ECD_02612	0.79	-2.6
2,726,285	+		ECD_02612	0.79	-1.8
2,726,286	-		ECD_02612	0.79	+0.4
2,726,286	-		ECD_02612	0.79	+0.5
2,726,286	-		ECD_02612	0.79	-0.4
2,726,286	-		ECD_02612	0.79	-1.0
2,726,286	-		ECD_02612	0.79	-0.1
2,726,286	-		ECD_02612	0.79	-0.7
2,726,326	+				-1.2
2,726,327	-				+0.4
2,726,342	+				-0.2
2,726,342	+				-1.8
2,726,342	+				-0.4
2,726,342	+				-3.5
2,726,343	-				-1.6
2,726,343	-				-1.1
2,726,343	-				-0.8
2,726,343	-				-0.2
2,726,343	-				+0.3
2,726,343	-				-1.2
2,726,343	-				-1.3
2,726,351	+				-1.7
2,726,352	-				-1.6
2,726,352	-				-1.0
2,726,356	+				-1.3
2,726,367	+				+0.3
2,726,367	+				-2.3
2,726,368	-				-0.2
2,726,411	-				-0.6
2,726,453	-		ECD_02613	0.17	-0.2
2,726,453	-		ECD_02613	0.17	+0.5
2,726,453	-		ECD_02613	0.17	-0.1
2,726,489	-		ECD_02613	0.23	+0.6
2,726,489	-		ECD_02613	0.23	-0.5
2,726,489	-		ECD_02613	0.23	-0.8
2,726,489	-		ECD_02613	0.23	-0.3
2,726,498	-		ECD_02613	0.24	+1.0
2,726,506	+		ECD_02613	0.26	-0.6
2,726,506	+		ECD_02613	0.26	+1.2
2,726,563	+		ECD_02613	0.36	-0.8
2,726,563	+		ECD_02613	0.36	-1.5
2,726,563	+		ECD_02613	0.36	-2.8
2,726,563	+		ECD_02613	0.36	-0.5
2,726,668	+		ECD_02613	0.54	-1.1
2,726,669	-		ECD_02613	0.54	-0.5
2,726,746	+		ECD_02613	0.68	-1.1
2,726,768	-		ECD_02613	0.71	-2.5
2,726,855	-		ECD_02613	0.86	-1.6
2,727,025	-				-0.7
2,727,034	-				-0.4
2,727,056	+				-0.4
2,727,057	-				-1.0
2,727,082	-				-2.1