Strain Fitness in Escherichia coli BL21 around ECD_02554

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_1
2,666,366	+				+0.9
2,666,442	+				-1.4
2,666,444	+				-0.6
2,666,444	+				+0.9
2,666,444	+				-1.1
2,666,445	-				-1.1
2,666,492	+		ECD_02553	0.14	-0.4
2,666,492	+		ECD_02553	0.14	+0.0
2,666,508	-		ECD_02553	0.16	-2.6
2,666,519	+		ECD_02553	0.17	-2.2
2,666,520	-		ECD_02553	0.17	-0.6
2,666,520	-		ECD_02553	0.17	-1.1
2,666,581	+		ECD_02553	0.23	-0.6
2,666,582	-		ECD_02553	0.23	-2.1
2,666,582	-		ECD_02553	0.23	-0.5
2,666,610	-		ECD_02553	0.26	-0.9
2,666,621	+		ECD_02553	0.27	-0.0
2,666,621	+		ECD_02553	0.27	-0.3
2,666,621	+		ECD_02553	0.27	-0.4
2,666,622	-		ECD_02553	0.28	-1.3
2,666,675	+		ECD_02553	0.33	-1.9
2,666,675	+		ECD_02553	0.33	-0.5
2,666,675	+		ECD_02553	0.33	+0.1
2,666,676	-		ECD_02553	0.33	-3.1
2,666,679	+		ECD_02553	0.33	-1.7
2,666,679	+		ECD_02553	0.33	-0.1
2,666,679	+		ECD_02553	0.33	-0.1
2,666,679	+		ECD_02553	0.33	-2.1
2,666,679	+		ECD_02553	0.33	-0.6
2,666,679	+		ECD_02553	0.33	-0.6
2,666,679	+		ECD_02553	0.33	-1.1
2,666,679	+		ECD_02553	0.33	-0.2
2,666,679	+		ECD_02553	0.33	-0.4
2,666,679	+		ECD_02553	0.33	-0.2
2,666,680	-		ECD_02553	0.34	-2.1
2,666,680	-		ECD_02553	0.34	-1.0
2,666,680	-		ECD_02553	0.34	-0.5
2,666,680	-		ECD_02553	0.34	+0.0
2,666,680	-		ECD_02553	0.34	-2.0
2,666,692	+		ECD_02553	0.35	-1.3
2,666,713	+		ECD_02553	0.37	-0.5
2,666,713	+		ECD_02553	0.37	+0.1
2,666,713	+		ECD_02553	0.37	-1.0
2,666,713	+		ECD_02553	0.37	-0.4
2,666,713	+		ECD_02553	0.37	-1.4
2,666,714	-		ECD_02553	0.37	-2.1
2,666,714	-		ECD_02553	0.37	-1.1
2,666,716	+		ECD_02553	0.37	+0.4
2,666,716	+		ECD_02553	0.37	-1.7
2,666,757	+		ECD_02553	0.42	-2.0
2,666,758	-		ECD_02553	0.42	-0.1
2,666,758	-		ECD_02553	0.42	+1.3
2,666,876	-		ECD_02553	0.54	-2.7
2,666,876	-		ECD_02553	0.54	-2.7
2,666,876	-		ECD_02553	0.54	-1.9
2,666,879	-		ECD_02553	0.54	-0.8
2,666,897	+		ECD_02553	0.56	-1.0
2,666,930	+		ECD_02553	0.60	-1.9
2,666,931	-		ECD_02553	0.60	-0.7
2,667,062	+		ECD_02553	0.73	+0.5
2,667,063	-		ECD_02553	0.73	-1.3
2,667,083	-		ECD_02553	0.76	-1.6
2,667,241	+				+0.1
2,667,241	+				+0.4
2,667,242	-				-0.2
2,667,277	+				+0.1
2,667,277	+				+0.8
2,667,306	-				-0.9
2,667,306	-				-1.0
2,667,306	-				-0.4
2,667,309	+				-0.2
2,667,309	+				+0.7
2,667,310	-				+0.2
2,667,310	-				-0.5
2,667,310	-				-0.3
2,667,310	-				+0.0
2,667,310	-				-0.6
2,667,310	-				-2.8
2,667,337	-				+0.0
2,667,337	-				-0.1
2,667,337	-				+0.4
2,667,442	+		ECD_02554	0.31	-0.1
2,667,442	+		ECD_02554	0.31	+0.2
2,667,442	+		ECD_02554	0.31	+0.3
2,667,442	+		ECD_02554	0.31	+1.1
2,667,442	+		ECD_02554	0.31	-0.1
2,667,442	+		ECD_02554	0.31	-0.3
2,667,443	-		ECD_02554	0.31	+0.4
2,667,443	-		ECD_02554	0.31	-0.1
2,667,443	-		ECD_02554	0.31	+0.0
2,667,744	-				-0.6
2,667,841	-		ECD_02555	0.18	-1.2
2,667,850	+		ECD_02555	0.19	+0.5
2,667,851	-		ECD_02555	0.19	-1.8
2,667,868	+		ECD_02555	0.21	+0.8
2,667,868	+		ECD_02555	0.21	-0.4
2,667,869	-		ECD_02555	0.21	-0.9
2,667,962	-		ECD_02555	0.33	-1.6
2,667,962	-		ECD_02555	0.33	-2.6
2,667,962	-		ECD_02555	0.33	-3.1
2,667,962	-		ECD_02555	0.33	-2.6
2,668,048	+		ECD_02555	0.44	-0.1
2,668,048	+		ECD_02555	0.44	-0.8
2,668,225	+		ECD_02555	0.67	-0.4
2,668,233	+		ECD_02555	0.68	-0.1
2,668,300	+		ECD_02555	0.77	-1.3
2,668,300	+		ECD_02555	0.77	+0.1
2,668,300	+		ECD_02555	0.77	+0.2
2,668,300	+		ECD_02555	0.77	-0.2
2,668,300	+		ECD_02555	0.77	-1.1
2,668,300	+		ECD_02555	0.77	-0.8
2,668,342	+		ECD_02555	0.82	-0.9
2,668,342	+		ECD_02555	0.82	-0.8
2,668,342	+		ECD_02555	0.82	+1.8
2,668,342	+		ECD_02555	0.82	+1.2
2,668,343	-		ECD_02555	0.82	-2.7
2,668,345	+		ECD_02555	0.82	-0.4
2,668,345	+		ECD_02555	0.82	-0.2
2,668,345	+		ECD_02555	0.82	-0.3
2,668,345	+		ECD_02555	0.82	-0.7
2,668,345	+		ECD_02555	0.82	+0.8
2,668,345	+		ECD_02555	0.82	+0.7
2,668,345	+		ECD_02555	0.82	+0.2
2,668,345	+		ECD_02555	0.82	-0.1
2,668,345	+		ECD_02555	0.82	+0.8
2,668,345	+		ECD_02555	0.82	-0.1
2,668,345	+		ECD_02555	0.82	-0.2
2,668,345	+		ECD_02555	0.82	-1.3
2,668,345	+		ECD_02555	0.82	-0.0
2,668,345	+		ECD_02555	0.82	+0.1
2,668,345	+		ECD_02555	0.82	+0.4
2,668,345	+		ECD_02555	0.82	-1.6
2,668,345	+		ECD_02555	0.82	+0.4
2,668,345	+		ECD_02555	0.82	-0.2
2,668,345	+		ECD_02555	0.82	-0.2
2,668,345	+		ECD_02555	0.82	+0.4
2,668,346	-		ECD_02555	0.82	-0.8
2,668,346	-		ECD_02555	0.82	+0.4
2,668,346	-		ECD_02555	0.82	+0.0
2,668,346	-		ECD_02555	0.82	-0.2
2,668,346	-		ECD_02555	0.82	-0.4
2,668,346	-		ECD_02555	0.82	-2.5
2,668,346	-		ECD_02555	0.82	-2.5
2,668,346	-		ECD_02555	0.82	-1.6
2,668,346	-		ECD_02555	0.82	-0.9
2,668,346	-		ECD_02555	0.82	+0.7
2,668,358	+		ECD_02555	0.84	-0.1
2,668,358	+		ECD_02555	0.84	-0.0
2,668,398	+		ECD_02555	0.89	+0.8
2,668,398	+		ECD_02555	0.89	+0.6
2,668,398	+		ECD_02555	0.89	-0.2
2,668,398	+		ECD_02555	0.89	-0.2
2,668,398	+		ECD_02555	0.89	+1.1
2,668,398	+		ECD_02555	0.89	+0.2
2,668,398	+		ECD_02555	0.89	+0.7
2,668,398	+		ECD_02555	0.89	+1.2
2,668,399	-		ECD_02555	0.89	-1.6
2,668,399	-		ECD_02555	0.89	-2.1
2,668,411	+				-0.4
2,668,411	+				+0.6
2,668,411	+				+0.0
2,668,411	+				+0.6
2,668,411	+				-1.3
2,668,412	-				-1.8
2,668,412	-				-2.4
2,668,422	+				+0.4
2,668,423	-				-1.0
2,668,432	+				+0.2
2,668,432	+				-0.2
2,668,433	-				-2.2
2,668,433	-				-0.5
2,668,501	+				+0.4
2,668,519	+				-1.0
2,668,522	+				-0.1
2,668,522	+				-0.7
2,668,522	+				-0.0
2,668,522	+				+0.2
2,668,522	+				-0.1
2,668,522	+				-0.6
2,668,522	+				+0.5
2,668,522	+				+0.9
2,668,522	+				+0.2
2,668,522	+				+1.2
2,668,522	+				+0.6
2,668,522	+				+0.6
2,668,522	+				-0.1
2,668,522	+				-0.9
2,668,522	+				+0.9
2,668,522	+				-0.3
2,668,554	+				-0.7
2,668,554	+				-0.1
2,668,555	-				+1.0
2,668,555	-				+0.2
2,668,571	+				-0.2
2,668,571	+				-1.8
2,668,571	+				+1.2
2,668,571	+				-0.5
2,668,571	+				-1.1
2,668,571	+				-0.3
2,668,572	-				+1.6
2,668,669	-		ECD_02556	0.23	+0.5
2,668,688	+		ECD_02556	0.28	-2.4
2,668,688	+		ECD_02556	0.28	-1.0
2,668,688	+		ECD_02556	0.28	-0.9
2,668,689	-		ECD_02556	0.28	-1.8
2,668,689	-		ECD_02556	0.28	-0.3
2,668,689	-		ECD_02556	0.28	-0.7