Strain Fitness in Escherichia coli BW25113 around b2151
Experiment: pinene 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | pinene 5 vol% |
---|---|---|---|---|---|
remove | |||||
2,237,897 | - | mglB | b2150 | 0.53 | -0.3 |
2,237,901 | + | mglB | b2150 | 0.53 | -0.4 |
2,237,927 | - | mglB | b2150 | 0.56 | -0.5 |
2,237,989 | - | mglB | b2150 | 0.62 | +0.0 |
2,238,223 | - | mglB | b2150 | 0.85 | +1.0 |
2,238,269 | + | mglB | b2150 | 0.90 | -0.6 |
2,238,309 | + | -0.1 | |||
2,238,309 | + | +0.6 | |||
2,238,488 | + | +0.8 | |||
2,238,488 | + | +0.4 | |||
2,238,602 | + | +0.0 | |||
2,238,602 | + | -1.4 | |||
2,238,647 | + | +0.1 | |||
2,238,762 | - | galS | b2151 | 0.11 | -1.0 |
2,238,762 | - | galS | b2151 | 0.11 | -0.0 |
2,238,839 | - | galS | b2151 | 0.18 | +0.3 |
2,238,857 | - | galS | b2151 | 0.20 | +0.9 |
2,239,012 | + | galS | b2151 | 0.35 | +0.3 |
2,239,042 | - | galS | b2151 | 0.38 | -0.3 |
2,239,066 | + | galS | b2151 | 0.40 | +0.1 |
2,239,098 | - | galS | b2151 | 0.43 | +0.4 |
2,239,098 | - | galS | b2151 | 0.43 | -0.1 |
2,239,112 | - | galS | b2151 | 0.44 | +0.1 |
2,239,267 | - | galS | b2151 | 0.59 | +0.6 |
2,239,394 | + | galS | b2151 | 0.71 | +0.8 |
2,239,429 | - | galS | b2151 | 0.75 | +0.4 |
2,239,429 | - | galS | b2151 | 0.75 | -0.2 |
2,239,452 | + | galS | b2151 | 0.77 | -0.0 |
2,239,532 | + | galS | b2151 | 0.85 | -0.8 |
2,239,590 | - | -0.6 | |||
2,239,590 | - | +0.9 | |||
2,239,605 | - | -0.5 | |||
2,239,605 | - | -1.6 | |||
2,239,699 | - | +0.9 | |||
2,239,752 | - | +0.1 | |||
2,239,937 | + | +0.6 | |||
2,239,953 | + | yeiB | b2152 | 0.10 | -0.0 |
2,240,119 | - | yeiB | b2152 | 0.25 | +0.0 |
2,240,217 | + | yeiB | b2152 | 0.33 | -0.2 |
2,240,262 | - | yeiB | b2152 | 0.37 | +1.5 |
2,240,313 | - | yeiB | b2152 | 0.42 | -0.3 |
2,240,566 | + | yeiB | b2152 | 0.63 | +0.8 |
2,240,566 | + | yeiB | b2152 | 0.63 | -0.2 |
Or see this region's nucleotide sequence