Strain Fitness in Escherichia coli BW25113 around b1744
Experiment: pinene 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | pinene 5 vol% |
---|---|---|---|---|---|
remove | |||||
1,823,108 | + | +0.4 | |||
1,823,191 | - | -1.2 | |||
1,823,293 | - | spy | b1743 | 0.27 | -0.3 |
1,823,519 | + | spy | b1743 | 0.73 | +0.9 |
1,823,549 | + | spy | b1743 | 0.79 | -0.2 |
1,823,549 | + | spy | b1743 | 0.79 | +1.0 |
1,823,559 | + | spy | b1743 | 0.81 | +0.3 |
1,823,587 | + | spy | b1743 | 0.87 | -1.2 |
1,823,595 | - | spy | b1743 | 0.89 | +0.6 |
1,823,595 | - | spy | b1743 | 0.89 | +0.2 |
1,823,613 | + | +0.2 | |||
1,823,621 | - | +0.4 | |||
1,823,629 | - | +0.6 | |||
1,823,629 | - | -0.7 | |||
1,823,683 | + | -0.4 | |||
1,823,686 | + | -1.1 | |||
1,823,703 | + | -0.7 | |||
1,823,711 | - | +0.1 | |||
1,823,729 | - | +0.2 | |||
1,824,017 | - | -0.2 | |||
1,824,017 | - | -0.5 | |||
1,824,032 | + | +0.2 | |||
1,824,047 | - | -0.0 | |||
1,824,047 | - | -0.5 | |||
1,824,052 | - | -0.4 | |||
1,824,053 | - | -0.3 | |||
1,824,059 | - | +0.7 | |||
1,824,059 | - | -0.5 | |||
1,824,087 | + | astE | b1744 | 0.11 | -0.8 |
1,824,090 | - | astE | b1744 | 0.11 | +0.2 |
1,824,090 | - | astE | b1744 | 0.11 | -0.3 |
1,824,095 | - | astE | b1744 | 0.12 | -0.6 |
1,824,095 | - | astE | b1744 | 0.12 | +0.1 |
1,824,095 | - | astE | b1744 | 0.12 | +0.4 |
1,824,095 | - | astE | b1744 | 0.12 | +0.1 |
1,824,330 | + | astE | b1744 | 0.36 | -0.1 |
1,824,333 | - | astE | b1744 | 0.37 | -0.1 |
1,824,380 | + | astE | b1744 | 0.41 | -0.3 |
1,824,397 | + | astE | b1744 | 0.43 | -0.3 |
1,824,512 | + | astE | b1744 | 0.55 | -0.8 |
1,824,650 | - | astE | b1744 | 0.69 | +0.8 |
1,824,857 | + | -1.1 | |||
1,824,871 | - | +0.3 | |||
1,825,089 | - | astB | b1745 | 0.11 | -1.5 |
1,825,285 | + | astB | b1745 | 0.26 | -0.3 |
1,825,285 | + | astB | b1745 | 0.26 | +0.1 |
1,825,293 | - | astB | b1745 | 0.26 | +0.4 |
1,825,321 | - | astB | b1745 | 0.28 | -1.1 |
1,825,321 | - | astB | b1745 | 0.28 | -0.7 |
1,825,378 | + | astB | b1745 | 0.33 | +0.6 |
1,825,727 | - | astB | b1745 | 0.59 | +0.0 |
1,825,767 | - | astB | b1745 | 0.62 | -0.1 |
Or see this region's nucleotide sequence