Strain Fitness in Pseudomonas putida KT2440 around PP_1374

Experiment: pinene 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 10 vol%
1,565,585	+				-1.0
1,565,760	-		PP_1374	0.59	-1.0
1,565,760	-		PP_1374	0.59	-0.9
1,565,760	-		PP_1374	0.59	-0.4
1,565,792	+		PP_1374	0.75	-0.3
1,565,792	+		PP_1374	0.75	-0.2
1,565,793	-		PP_1374	0.76	-0.3
1,565,793	-		PP_1374	0.76	+0.4
1,565,793	-		PP_1374	0.76	-0.8
1,565,848	+				-0.3
1,565,849	-				+0.2
1,565,849	-				-1.3
1,565,858	-				+0.5
1,565,858	-				+0.3
1,565,863	+				-0.4
1,565,863	+				+0.1
1,565,864	-				+2.0
1,565,924	+				-2.5
1,565,925	-				+0.6
1,565,977	+				-0.5
1,565,978	-				+0.7
1,565,978	-				+0.3
1,566,006	-				+0.2
1,566,011	-				+0.6
1,566,011	-				-0.2
1,566,035	+				-2.3
1,566,036	-				+0.3
1,566,039	+				-0.6
1,566,101	-				+0.8
1,566,101	-				+0.4
1,566,132	-				+1.1
1,566,180	+				+0.2
1,566,180	+				+0.8
1,566,181	-				+0.1
1,566,181	-				-0.2
1,566,181	-				+0.4
1,566,181	-				+0.0
1,566,181	-				+1.4
1,566,181	-				-0.9
1,566,189	+				+1.8
1,566,189	+				+0.6
1,566,235	+				+0.0
1,566,235	+				-0.2
1,566,236	-				+0.5
1,566,617	+		PP_1375	0.34	+1.0
1,566,617	+		PP_1375	0.34	-0.2
1,566,660	+		PP_1375	0.39	-0.4
1,566,660	+		PP_1375	0.39	-1.0
1,566,660	+		PP_1375	0.39	+0.3
1,566,771	+		PP_1375	0.51	-0.2
1,566,771	+		PP_1375	0.51	-0.4
1,566,771	+		PP_1375	0.51	+0.4
1,566,771	+		PP_1375	0.51	-0.8
1,566,772	-		PP_1375	0.51	-0.6
1,566,772	-		PP_1375	0.51	-1.0
1,566,772	-		PP_1375	0.51	+0.4
1,566,772	-		PP_1375	0.51	+0.2
1,566,772	-		PP_1375	0.51	-0.4
1,566,772	-		PP_1375	0.51	-0.7
1,566,772	-		PP_1375	0.51	+0.9
1,566,772	-		PP_1375	0.51	-0.2
1,566,772	-		PP_1375	0.51	-0.3
1,566,773	+		PP_1375	0.52	+0.6
1,566,773	+		PP_1375	0.52	-0.4
1,566,773	+		PP_1375	0.52	-0.7
1,566,773	+		PP_1375	0.52	+0.5
1,566,773	+		PP_1375	0.52	-1.5
1,566,773	+		PP_1375	0.52	-0.9
1,566,774	-		PP_1375	0.52	+0.4
1,566,774	-		PP_1375	0.52	-1.5
1,566,774	-		PP_1375	0.52	-0.2
1,566,774	-		PP_1375	0.52	-0.0
1,566,774	-		PP_1375	0.52	-2.3
1,566,774	-		PP_1375	0.52	+0.6
1,566,775	+		PP_1375	0.52	-0.0