Strain Fitness in Escherichia coli BL21 around ECD_02704

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_10
2,837,453	+		ECD_02703	0.28	-0.5
2,837,453	+		ECD_02703	0.28	-0.2
2,837,453	+		ECD_02703	0.28	+0.1
2,837,478	-		ECD_02703	0.30	-1.6
2,837,495	+		ECD_02703	0.31	+0.3
2,837,495	+		ECD_02703	0.31	+0.1
2,837,495	+		ECD_02703	0.31	-0.9
2,837,495	+		ECD_02703	0.31	+0.2
2,837,495	+		ECD_02703	0.31	+0.7
2,837,495	+		ECD_02703	0.31	+1.5
2,837,495	+		ECD_02703	0.31	+0.3
2,837,496	-		ECD_02703	0.31	-1.7
2,837,496	-		ECD_02703	0.31	+1.4
2,837,499	+		ECD_02703	0.31	+0.1
2,837,499	+		ECD_02703	0.31	+0.4
2,837,499	+		ECD_02703	0.31	+0.2
2,837,499	+		ECD_02703	0.31	+0.5
2,837,499	+		ECD_02703	0.31	+0.2
2,837,499	+		ECD_02703	0.31	-0.4
2,837,499	+		ECD_02703	0.31	+0.6
2,837,499	+		ECD_02703	0.31	-0.3
2,837,499	+		ECD_02703	0.31	+1.5
2,837,499	+		ECD_02703	0.31	-0.4
2,837,499	+		ECD_02703	0.31	+0.2
2,837,499	+		ECD_02703	0.31	-0.3
2,837,499	+		ECD_02703	0.31	+1.4
2,837,499	+		ECD_02703	0.31	-0.8
2,837,499	+		ECD_02703	0.31	+0.6
2,837,500	-		ECD_02703	0.32	-0.5
2,837,500	-		ECD_02703	0.32	+0.8
2,837,500	-		ECD_02703	0.32	-1.0
2,837,500	-		ECD_02703	0.32	+0.6
2,837,500	-		ECD_02703	0.32	-0.9
2,837,500	-		ECD_02703	0.32	-1.1
2,837,500	-		ECD_02703	0.32	-0.1
2,837,500	-		ECD_02703	0.32	-0.2
2,837,500	-		ECD_02703	0.32	-0.9
2,837,500	-		ECD_02703	0.32	+0.1
2,837,520	+		ECD_02703	0.33	-0.0
2,837,520	+		ECD_02703	0.33	+1.2
2,837,520	+		ECD_02703	0.33	+0.5
2,837,520	+		ECD_02703	0.33	+0.2
2,837,520	+		ECD_02703	0.33	+0.5
2,837,520	+		ECD_02703	0.33	+0.5
2,837,520	+		ECD_02703	0.33	-0.5
2,837,521	-		ECD_02703	0.33	-1.1
2,837,521	-		ECD_02703	0.33	-0.3
2,837,521	-		ECD_02703	0.33	-0.9
2,837,522	+		ECD_02703	0.33	+0.1
2,837,522	+		ECD_02703	0.33	-0.1
2,837,522	+		ECD_02703	0.33	+0.5
2,837,522	+		ECD_02703	0.33	+0.1
2,837,523	-		ECD_02703	0.34	-0.4
2,837,523	-		ECD_02703	0.34	+0.2
2,837,556	+		ECD_02703	0.36	+0.9
2,837,569	+		ECD_02703	0.37	+1.1
2,837,569	+		ECD_02703	0.37	+0.4
2,837,569	+		ECD_02703	0.37	-0.3
2,837,569	+		ECD_02703	0.37	+1.1
2,837,570	-		ECD_02703	0.37	+0.3
2,837,570	-		ECD_02703	0.37	-1.3
2,837,609	+		ECD_02703	0.41	+1.3
2,837,713	-		ECD_02703	0.49	-0.4
2,837,724	+		ECD_02703	0.50	+0.3
2,837,724	+		ECD_02703	0.50	+0.4
2,837,724	+		ECD_02703	0.50	+0.2
2,837,724	+		ECD_02703	0.50	-0.3
2,837,744	-		ECD_02703	0.52	-1.4
2,837,781	-		ECD_02703	0.55	+0.5
2,837,855	+		ECD_02703	0.61	-0.9
2,837,855	+		ECD_02703	0.61	-0.6
2,837,856	-		ECD_02703	0.61	-0.5
2,837,856	-		ECD_02703	0.61	+0.2
2,837,870	+		ECD_02703	0.63	+0.2
2,837,926	-		ECD_02703	0.67	-0.5
2,837,946	+		ECD_02703	0.69	+0.2
2,837,946	+		ECD_02703	0.69	-0.7
2,837,947	-		ECD_02703	0.69	-0.3
2,837,967	-		ECD_02703	0.71	-0.7
2,838,001	+		ECD_02703	0.74	-0.1
2,838,059	+		ECD_02703	0.79	-1.1
2,838,059	+		ECD_02703	0.79	-0.9
2,838,060	-		ECD_02703	0.79	-1.4
2,838,102	+		ECD_02703	0.82	+0.2
2,838,102	+		ECD_02703	0.82	-0.7
2,838,102	+		ECD_02703	0.82	+0.0
2,838,102	+		ECD_02703	0.82	-0.2
2,838,103	-		ECD_02703	0.82	-0.9
2,838,125	+		ECD_02703	0.84	+0.3
2,838,180	+		ECD_02703	0.89	-0.2
2,838,181	-		ECD_02703	0.89	-2.1
2,838,196	-				-0.8
2,838,196	-				-1.7
2,838,219	+				+0.0
2,838,219	+				+1.2
2,838,219	+				-0.4
2,838,219	+				+0.3
2,838,219	+				-0.8
2,838,219	+				+0.7
2,838,219	+				+0.3
2,838,219	+				+1.1
2,838,219	+				-0.2
2,838,220	-				-1.4
2,838,220	-				-2.2
2,838,220	-				-1.2
2,838,220	-				-0.7
2,838,220	-				-0.3
2,838,220	-				-1.7
2,838,221	+				+0.3
2,838,221	+				+0.2
2,838,221	+				-0.1
2,838,221	+				+0.4
2,838,221	+				+0.5
2,838,221	+				+0.1
2,838,221	+				+0.4
2,838,221	+				-0.3
2,838,221	+				+1.3
2,838,221	+				+1.1
2,838,221	+				+1.7
2,838,222	-				-1.9
2,838,222	-				-1.7
2,838,222	-				-1.3
2,838,222	-				-2.3
2,838,222	-				-3.2
2,838,222	-				-0.9
2,838,222	-				-1.1
2,838,222	-				-2.1
2,838,252	+				+0.4
2,838,371	+				+0.5
2,838,371	+				-0.9
2,838,371	+				-2.1
2,838,371	+				+0.7
2,838,371	+				-2.5
2,838,371	+				+0.2
2,838,371	+				-3.0
2,838,371	+				+0.3
2,838,371	+				+0.5
2,838,371	+				+0.3
2,838,371	+				-0.3
2,838,371	+				+0.1
2,838,371	+				-0.9
2,838,372	-				+1.2
2,838,372	-				-0.5
2,838,372	-				-0.5
2,838,372	-				-0.5
2,838,487	+				+0.9
2,838,635	-		ECD_02704	0.22	+0.8
2,838,635	-		ECD_02704	0.22	-0.1
2,838,635	-		ECD_02704	0.22	+0.2
2,838,792	+		ECD_02704	0.35	-0.2
2,838,792	+		ECD_02704	0.35	-0.3
2,838,792	+		ECD_02704	0.35	-1.9
2,838,792	+		ECD_02704	0.35	+0.2
2,838,792	+		ECD_02704	0.35	-1.6
2,838,793	-		ECD_02704	0.35	-1.2
2,838,793	-		ECD_02704	0.35	+0.6
2,838,793	-		ECD_02704	0.35	-0.4
2,838,866	+		ECD_02704	0.41	-0.4
2,838,866	+		ECD_02704	0.41	+1.8
2,838,867	-		ECD_02704	0.41	-1.1
2,838,873	+		ECD_02704	0.42	-0.4
2,838,874	-		ECD_02704	0.42	-0.6
2,838,874	-		ECD_02704	0.42	-0.4
2,838,932	-		ECD_02704	0.47	+2.9
2,839,113	+		ECD_02704	0.62	-0.9
2,839,113	+		ECD_02704	0.62	+1.2
2,839,114	-		ECD_02704	0.62	-1.2
2,839,114	-		ECD_02704	0.62	-0.3
2,839,114	-		ECD_02704	0.62	-0.3
2,839,114	-		ECD_02704	0.62	+0.7
2,839,140	-		ECD_02704	0.64	-0.1
2,839,166	+		ECD_02704	0.66	+0.4
2,839,166	+		ECD_02704	0.66	+1.1
2,839,166	+		ECD_02704	0.66	-1.2
2,839,166	+		ECD_02704	0.66	-0.2
2,839,167	-		ECD_02704	0.66	+0.3
2,839,167	-		ECD_02704	0.66	-0.5
2,839,167	-		ECD_02704	0.66	+0.2
2,839,167	-		ECD_02704	0.66	-1.2
2,839,167	-		ECD_02704	0.66	-0.8
2,839,167	-		ECD_02704	0.66	-1.7
2,839,167	-		ECD_02704	0.66	+0.3
2,839,171	-		ECD_02704	0.67	-0.7
2,839,280	+		ECD_02704	0.76	-1.5
2,839,281	-		ECD_02704	0.76	-0.3
2,839,281	-		ECD_02704	0.76	-1.0
2,839,281	-		ECD_02704	0.76	-1.4
2,839,327	+		ECD_02704	0.80	+0.5
2,839,327	+		ECD_02704	0.80	+0.2
2,839,331	+		ECD_02704	0.80	-0.0
2,839,331	+		ECD_02704	0.80	+0.1
2,839,331	+		ECD_02704	0.80	+0.9
2,839,331	+		ECD_02704	0.80	+0.3
2,839,331	+		ECD_02704	0.80	+0.4
2,839,332	-		ECD_02704	0.80	-0.9
2,839,525	-				-0.1
2,839,559	-				-0.6
2,839,559	-				+0.7
2,839,567	-				-1.0
2,839,567	-				-0.8
2,839,585	-				+0.2
2,839,624	+				+0.1
2,839,715	+				-1.1
2,839,747	+				-0.5
2,839,747	+				-0.2
2,839,750	+		ECD_02705	0.10	-0.1
2,839,750	+		ECD_02705	0.10	+0.3
2,839,750	+		ECD_02705	0.10	-0.1
2,839,751	-		ECD_02705	0.10	-0.6
2,839,751	-		ECD_02705	0.10	-1.5
2,839,751	-		ECD_02705	0.10	-0.4
2,839,751	-		ECD_02705	0.10	+0.2
2,839,751	-		ECD_02705	0.10	-1.9
2,839,758	-		ECD_02705	0.11	-1.8
2,839,758	-		ECD_02705	0.11	-0.3
2,839,758	-		ECD_02705	0.11	-1.1
2,839,760	+		ECD_02705	0.11	-0.4
2,839,827	+		ECD_02705	0.17	+0.6
2,839,829	+		ECD_02705	0.17	-1.4
2,839,995	+		ECD_02705	0.30	+0.1
2,839,996	-		ECD_02705	0.31	-0.1
2,839,996	-		ECD_02705	0.31	+0.9
2,840,012	+		ECD_02705	0.32	-1.4
2,840,037	+		ECD_02705	0.34	-0.8
2,840,037	+		ECD_02705	0.34	+0.2
2,840,037	+		ECD_02705	0.34	-0.8
2,840,037	+		ECD_02705	0.34	+0.5
2,840,037	+		ECD_02705	0.34	-0.1
2,840,037	+		ECD_02705	0.34	-0.7
2,840,037	+		ECD_02705	0.34	-0.1
2,840,038	-		ECD_02705	0.34	-2.0
2,840,039	+		ECD_02705	0.34	+0.3
2,840,039	+		ECD_02705	0.34	+1.3
2,840,039	+		ECD_02705	0.34	+0.3
2,840,039	+		ECD_02705	0.34	-1.1
2,840,039	+		ECD_02705	0.34	-0.5
2,840,039	+		ECD_02705	0.34	-0.1
2,840,039	+		ECD_02705	0.34	+0.3
2,840,097	+		ECD_02705	0.39	-0.1
2,840,103	-		ECD_02705	0.39	-1.6
2,840,103	-		ECD_02705	0.39	-2.1
2,840,387	-		ECD_02705	0.63	-0.5
2,840,393	+		ECD_02705	0.63	-0.7
2,840,479	+		ECD_02705	0.70	-0.2
2,840,480	-		ECD_02705	0.70	+0.4
2,840,480	-		ECD_02705	0.70	-0.1
2,840,490	-		ECD_02705	0.71	-0.4
2,840,504	+		ECD_02705	0.72	-0.8
2,840,504	+		ECD_02705	0.72	-0.6
2,840,504	+		ECD_02705	0.72	-0.7
2,840,505	-		ECD_02705	0.73	+0.5
2,840,505	-		ECD_02705	0.73	-0.2
2,840,505	-		ECD_02705	0.73	-0.4
2,840,505	-		ECD_02705	0.73	-0.7
2,840,508	+		ECD_02705	0.73	-0.4
2,840,508	+		ECD_02705	0.73	+1.3
2,840,508	+		ECD_02705	0.73	-1.1
2,840,508	+		ECD_02705	0.73	-0.7
2,840,509	-		ECD_02705	0.73	-0.4
2,840,509	-		ECD_02705	0.73	-0.9
2,840,509	-		ECD_02705	0.73	-1.1
2,840,514	+		ECD_02705	0.73	-1.8
2,840,514	+		ECD_02705	0.73	-0.2
2,840,559	+		ECD_02705	0.77	+0.3
2,840,560	-		ECD_02705	0.77	-0.1
2,840,560	-		ECD_02705	0.77	+0.7
2,840,560	-		ECD_02705	0.77	-0.8
2,840,560	-		ECD_02705	0.77	-0.5