Strain Fitness in Escherichia coli BL21 around ECD_02578

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_10
2,690,848	+		ECD_02576	0.67	+0.4
2,690,848	+		ECD_02576	0.67	+0.8
2,690,848	+		ECD_02576	0.67	+2.0
2,690,848	+		ECD_02576	0.67	+2.4
2,690,848	+		ECD_02576	0.67	-0.5
2,690,848	+		ECD_02576	0.67	-0.5
2,690,848	+		ECD_02576	0.67	-0.8
2,690,848	+		ECD_02576	0.67	-0.8
2,690,848	+		ECD_02576	0.67	-0.2
2,690,848	+		ECD_02576	0.67	+0.1
2,690,849	-		ECD_02576	0.67	-0.4
2,690,930	+				-0.3
2,690,931	-				-1.1
2,690,946	-				+0.5
2,690,946	-				+0.7
2,690,951	+				-0.8
2,690,951	+				-0.3
2,690,951	+				-0.6
2,690,951	+				+0.4
2,690,951	+				-0.7
2,690,951	+				-0.5
2,690,952	-				-1.6
2,690,952	-				-0.1
2,690,952	-				-1.5
2,690,973	+				-2.3
2,690,973	+				-1.0
2,690,973	+				-2.1
2,690,973	+				-1.5
2,690,974	-				-2.4
2,690,974	-				-0.3
2,690,974	-				-1.5
2,690,974	-				-1.1
2,690,974	-				-0.5
2,690,974	-				-0.8
2,691,004	+				-0.4
2,691,004	+				+0.1
2,691,004	+				-1.7
2,691,004	+				-0.1
2,691,004	+				-2.3
2,691,004	+				+0.1
2,691,004	+				-2.0
2,691,005	-				+1.0
2,691,005	-				-2.7
2,691,005	-				-0.7
2,691,005	-				+0.0
2,691,005	-				-1.2
2,691,005	-				-0.9
2,691,005	-				-2.7
2,691,005	-				-1.4
2,691,005	-				-1.8
2,691,025	-				-1.8
2,691,025	-				-2.1
2,691,045	+				-0.6
2,691,096	+		ECD_02577	0.15	-0.1
2,691,096	+		ECD_02577	0.15	-0.6
2,691,145	+		ECD_02577	0.20	+0.2
2,691,342	-		ECD_02577	0.43	+1.0
2,691,375	+		ECD_02577	0.47	-0.9
2,691,375	+		ECD_02577	0.47	-0.8
2,691,376	-		ECD_02577	0.47	-1.9
2,691,376	-		ECD_02577	0.47	-1.0
2,691,457	-		ECD_02577	0.56	-1.1
2,691,525	+		ECD_02577	0.64	-0.9
2,691,525	+		ECD_02577	0.64	+1.9
2,691,526	-		ECD_02577	0.64	+0.4
2,691,557	+		ECD_02577	0.67	+0.1
2,691,557	+		ECD_02577	0.67	-1.2
2,691,558	-		ECD_02577	0.68	+0.6
2,691,558	-		ECD_02577	0.68	-1.3
2,691,640	+		ECD_02577	0.77	-1.1
2,691,648	+		ECD_02577	0.78	+0.9
2,691,648	+		ECD_02577	0.78	+0.4
2,691,648	+		ECD_02577	0.78	-0.2
2,691,648	+		ECD_02577	0.78	-0.5
2,691,649	-		ECD_02577	0.78	-0.6
2,691,649	-		ECD_02577	0.78	-1.1
2,691,649	-		ECD_02577	0.78	-1.0
2,691,700	+		ECD_02577	0.84	+0.4
2,691,700	+		ECD_02577	0.84	+0.2
2,691,771	+				-1.9
2,691,771	+				+0.4
2,691,771	+				-0.1
2,691,771	+				+0.7
2,691,772	-				+0.1
2,691,838	+				-2.3
2,691,839	-				-0.2
2,691,839	-				-1.6
2,691,839	-				+0.2
2,691,839	-				+0.4
2,691,919	+		ECD_02578	0.32	+1.3
2,691,919	+		ECD_02578	0.32	-0.2
2,691,919	+		ECD_02578	0.32	+0.7
2,691,919	+		ECD_02578	0.32	+0.9
2,691,919	+		ECD_02578	0.32	+1.1
2,691,919	+		ECD_02578	0.32	-0.7
2,691,919	+		ECD_02578	0.32	+0.1
2,691,920	-		ECD_02578	0.33	+0.7
2,691,920	-		ECD_02578	0.33	+0.8
2,691,920	-		ECD_02578	0.33	-0.8
2,691,979	+		ECD_02578	0.54	-0.1
2,691,980	-		ECD_02578	0.55	-0.5
2,692,003	+		ECD_02578	0.63	-0.8
2,692,003	+		ECD_02578	0.63	+0.6
2,692,003	+		ECD_02578	0.63	-0.2
2,692,004	-		ECD_02578	0.63	-0.8
2,692,004	-		ECD_02578	0.63	-0.9
2,692,004	-		ECD_02578	0.63	-0.5
2,692,004	-		ECD_02578	0.63	-0.5
2,692,007	+		ECD_02578	0.64	+0.1
2,692,007	+		ECD_02578	0.64	+0.2
2,692,007	+		ECD_02578	0.64	-0.0
2,692,007	+		ECD_02578	0.64	+1.6
2,692,008	-		ECD_02578	0.65	-0.8
2,692,008	-		ECD_02578	0.65	-1.8
2,692,008	-		ECD_02578	0.65	-1.3
2,692,042	+		ECD_02578	0.77	-0.7
2,692,043	-		ECD_02578	0.78	-0.5
2,692,043	-		ECD_02578	0.78	-1.7
2,692,043	-		ECD_02578	0.78	-0.2
2,692,086	+				+0.7
2,692,086	+				-0.2
2,692,086	+				-0.9
2,692,086	+				+0.0
2,692,086	+				+0.3
2,692,087	-				+0.1
2,692,087	-				-0.2
2,692,101	+				-0.3
2,692,149	+				-1.6
2,692,150	-				-0.3
2,692,187	+				-1.1
2,692,187	+				-0.5
2,692,187	+				+0.2
2,692,187	+				-0.6
2,692,188	-				-0.6
2,692,188	-				-0.5
2,692,188	-				-0.4
2,692,213	+				-0.1
2,692,214	-				-1.5
2,692,234	+		ECD_02579	0.12	-2.4
2,692,234	+		ECD_02579	0.12	-0.5
2,692,235	-		ECD_02579	0.12	-1.7
2,692,243	+		ECD_02579	0.12	+0.1
2,692,243	+		ECD_02579	0.12	-0.1
2,692,244	-		ECD_02579	0.13	-1.7
2,692,244	-		ECD_02579	0.13	-3.3
2,692,244	-		ECD_02579	0.13	-3.1
2,692,244	-		ECD_02579	0.13	-1.1
2,692,244	-		ECD_02579	0.13	-0.7
2,692,250	-		ECD_02579	0.13	-2.4
2,692,269	+		ECD_02579	0.15	+1.1
2,692,270	-		ECD_02579	0.15	-1.2
2,692,270	-		ECD_02579	0.15	-1.7
2,692,291	+		ECD_02579	0.17	-0.1
2,692,291	+		ECD_02579	0.17	+0.6
2,692,333	+		ECD_02579	0.20	-0.5
2,692,469	+		ECD_02579	0.33	-1.6
2,692,470	-		ECD_02579	0.33	-1.8
2,692,552	+		ECD_02579	0.40	+0.2
2,692,552	+		ECD_02579	0.40	+0.2
2,692,552	+		ECD_02579	0.40	+0.4
2,692,552	+		ECD_02579	0.40	-0.7
2,692,553	-		ECD_02579	0.40	-1.6
2,692,553	-		ECD_02579	0.40	-0.9
2,692,630	+		ECD_02579	0.47	+0.2
2,692,630	+		ECD_02579	0.47	+0.6
2,692,630	+		ECD_02579	0.47	-0.3
2,692,631	-		ECD_02579	0.47	+0.3
2,692,631	-		ECD_02579	0.47	-0.2
2,692,631	-		ECD_02579	0.47	+0.4
2,692,631	-		ECD_02579	0.47	-0.1
2,692,631	-		ECD_02579	0.47	-0.2
2,692,631	-		ECD_02579	0.47	-1.5
2,692,631	-		ECD_02579	0.47	-0.3
2,692,637	-		ECD_02579	0.48	-0.1
2,692,711	+		ECD_02579	0.54	-0.9
2,692,733	+		ECD_02579	0.56	-1.2
2,692,733	+		ECD_02579	0.56	-0.3
2,692,736	-		ECD_02579	0.56	-0.2
2,692,741	+		ECD_02579	0.57	-0.4
2,692,797	+		ECD_02579	0.62	+0.9
2,692,797	+		ECD_02579	0.62	+0.4
2,692,797	+		ECD_02579	0.62	-0.3
2,692,797	+		ECD_02579	0.62	-0.7
2,692,797	+		ECD_02579	0.62	-2.0
2,692,797	+		ECD_02579	0.62	+0.7
2,692,798	-		ECD_02579	0.62	-1.1
2,692,798	-		ECD_02579	0.62	-0.9
2,692,800	+		ECD_02579	0.62	+2.1
2,692,800	+		ECD_02579	0.62	+0.2
2,692,800	+		ECD_02579	0.62	-0.1
2,692,800	+		ECD_02579	0.62	+0.0
2,692,800	+		ECD_02579	0.62	-0.2
2,692,800	+		ECD_02579	0.62	+0.8
2,692,800	+		ECD_02579	0.62	+1.3
2,692,801	-		ECD_02579	0.62	-0.8
2,692,801	-		ECD_02579	0.62	-0.1
2,692,801	-		ECD_02579	0.62	-0.8
2,692,801	-		ECD_02579	0.62	+0.1
2,692,834	-		ECD_02579	0.65	-0.2
2,692,852	-		ECD_02579	0.67	-0.7
2,692,862	+		ECD_02579	0.68	+0.2
2,692,863	-		ECD_02579	0.68	-0.9
2,692,863	-		ECD_02579	0.68	-0.7
2,692,956	+		ECD_02579	0.76	+1.7
2,692,957	-		ECD_02579	0.76	-0.5
2,692,997	+		ECD_02579	0.80	+0.7
2,692,997	+		ECD_02579	0.80	-0.3
2,693,079	+		ECD_02579	0.87	+0.1
2,693,079	+		ECD_02579	0.87	-1.2
2,693,079	+		ECD_02579	0.87	+0.6
2,693,080	-		ECD_02579	0.87	-0.1
2,693,080	-		ECD_02579	0.87	+1.1
2,693,082	+		ECD_02579	0.87	+0.3
2,693,095	+		ECD_02579	0.88	-0.3
2,693,095	+		ECD_02579	0.88	+0.1
2,693,095	+		ECD_02579	0.88	-0.4
2,693,095	+		ECD_02579	0.88	-0.5
2,693,095	+		ECD_02579	0.88	-0.5
2,693,095	+		ECD_02579	0.88	-0.7