Strain Fitness in Escherichia coli BL21 around ECD_02553

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_10
2,665,375	-		ECD_02551	0.85	+0.5
2,665,375	-		ECD_02551	0.85	-1.1
2,665,377	+		ECD_02551	0.85	-1.3
2,665,377	+		ECD_02551	0.85	-0.5
2,665,467	+				+0.3
2,665,468	-				+0.6
2,665,486	-				-0.1
2,665,522	+				-1.0
2,665,522	+				-1.4
2,665,522	+				-1.3
2,665,522	+				-2.1
2,665,522	+				-0.9
2,665,522	+				-1.4
2,665,523	-				-1.5
2,665,523	-				-0.4
2,665,523	-				-0.2
2,665,523	-				-0.5
2,665,523	-				+0.2
2,665,523	-				+0.8
2,665,523	-				+0.7
2,665,523	-				+0.1
2,665,523	-				+0.1
2,665,523	-				-2.4
2,665,523	-				-1.7
2,665,526	+				-0.8
2,665,526	+				-3.2
2,665,526	+				-0.4
2,665,527	-				-1.2
2,665,527	-				+0.6
2,665,527	-				-0.9
2,665,555	+				-1.0
2,665,578	+				-1.1
2,665,578	+				-1.4
2,665,579	-				-0.0
2,665,579	-				-1.0
2,665,583	+				-2.2
2,665,583	+				-1.6
2,665,584	-				-2.1
2,665,640	+				-1.5
2,665,641	-				-0.1
2,665,641	-				-2.2
2,665,641	-				+0.2
2,665,641	-				-0.1
2,665,641	-				-1.1
2,665,802	+				-1.2
2,665,802	+				+0.4
2,665,803	-				-1.6
2,665,803	-				-0.7
2,665,812	+				-1.1
2,665,902	+		ECD_02552	0.18	+1.0
2,665,932	+		ECD_02552	0.24	+0.5
2,665,932	+		ECD_02552	0.24	-0.9
2,665,953	+		ECD_02552	0.27	-2.0
2,665,953	+		ECD_02552	0.27	+0.3
2,665,953	+		ECD_02552	0.27	-0.3
2,665,954	-		ECD_02552	0.28	-0.8
2,665,954	-		ECD_02552	0.28	-1.0
2,665,999	+		ECD_02552	0.36	-1.6
2,666,003	+		ECD_02552	0.36	+0.3
2,666,003	+		ECD_02552	0.36	+0.1
2,666,003	+		ECD_02552	0.36	-2.3
2,666,003	+		ECD_02552	0.36	-0.9
2,666,003	+		ECD_02552	0.36	-1.0
2,666,003	+		ECD_02552	0.36	-0.4
2,666,003	+		ECD_02552	0.36	-1.8
2,666,003	+		ECD_02552	0.36	-1.4
2,666,003	+		ECD_02552	0.36	-0.7
2,666,004	-		ECD_02552	0.37	+1.1
2,666,004	-		ECD_02552	0.37	-0.9
2,666,004	-		ECD_02552	0.37	-2.4
2,666,004	-		ECD_02552	0.37	-1.0
2,666,004	-		ECD_02552	0.37	-1.0
2,666,004	-		ECD_02552	0.37	-2.5
2,666,052	-		ECD_02552	0.45	-0.7
2,666,052	-		ECD_02552	0.45	+0.1
2,666,052	-		ECD_02552	0.45	-1.2
2,666,052	-		ECD_02552	0.45	-3.4
2,666,067	+		ECD_02552	0.48	+0.4
2,666,080	+		ECD_02552	0.50	-0.5
2,666,080	+		ECD_02552	0.50	-1.2
2,666,081	-		ECD_02552	0.50	-1.2
2,666,081	-		ECD_02552	0.50	-0.5
2,666,081	-		ECD_02552	0.50	-0.0
2,666,081	-		ECD_02552	0.50	-1.2
2,666,092	+		ECD_02552	0.52	-0.2
2,666,092	+		ECD_02552	0.52	+0.2
2,666,092	+		ECD_02552	0.52	-2.4
2,666,092	+		ECD_02552	0.52	-1.6
2,666,095	+		ECD_02552	0.53	+0.8
2,666,110	+		ECD_02552	0.55	+0.2
2,666,110	+		ECD_02552	0.55	-0.3
2,666,110	+		ECD_02552	0.55	-1.1
2,666,110	+		ECD_02552	0.55	-0.9
2,666,111	-		ECD_02552	0.55	-1.3
2,666,112	+		ECD_02552	0.56	-0.8
2,666,112	+		ECD_02552	0.56	+0.8
2,666,112	+		ECD_02552	0.56	-0.2
2,666,112	+		ECD_02552	0.56	-0.7
2,666,112	+		ECD_02552	0.56	-0.0
2,666,112	+		ECD_02552	0.56	+0.1
2,666,112	+		ECD_02552	0.56	-1.9
2,666,113	-		ECD_02552	0.56	-0.5
2,666,113	-		ECD_02552	0.56	-0.1
2,666,113	-		ECD_02552	0.56	-0.7
2,666,113	-		ECD_02552	0.56	-1.4
2,666,113	-		ECD_02552	0.56	-0.8
2,666,113	-		ECD_02552	0.56	-1.4
2,666,113	-		ECD_02552	0.56	-1.5
2,666,113	-		ECD_02552	0.56	-0.6
2,666,113	-		ECD_02552	0.56	-1.0
2,666,113	-		ECD_02552	0.56	+0.8
2,666,145	+		ECD_02552	0.62	-0.1
2,666,146	-		ECD_02552	0.62	-1.5
2,666,170	+		ECD_02552	0.66	-0.8
2,666,170	+		ECD_02552	0.66	+0.0
2,666,170	+		ECD_02552	0.66	+0.8
2,666,233	+		ECD_02552	0.77	+0.4
2,666,233	+		ECD_02552	0.77	-0.2
2,666,233	+		ECD_02552	0.77	-0.3
2,666,233	+		ECD_02552	0.77	-0.1
2,666,233	+		ECD_02552	0.77	+0.5
2,666,234	-		ECD_02552	0.77	-0.7
2,666,234	-		ECD_02552	0.77	-2.1
2,666,234	-		ECD_02552	0.77	+0.6
2,666,234	-		ECD_02552	0.77	-1.6
2,666,366	+				+0.9
2,666,442	+				-1.9
2,666,444	+				-1.3
2,666,444	+				+0.6
2,666,444	+				-0.3
2,666,445	-				-1.3
2,666,492	+		ECD_02553	0.14	-1.2
2,666,492	+		ECD_02553	0.14	+0.3
2,666,508	-		ECD_02553	0.16	-1.1
2,666,519	+		ECD_02553	0.17	-0.8
2,666,520	-		ECD_02553	0.17	+0.5
2,666,520	-		ECD_02553	0.17	-0.3
2,666,581	+		ECD_02553	0.23	-0.9
2,666,582	-		ECD_02553	0.23	-1.5
2,666,582	-		ECD_02553	0.23	+0.8
2,666,610	-		ECD_02553	0.26	-0.5
2,666,621	+		ECD_02553	0.27	-0.5
2,666,621	+		ECD_02553	0.27	-0.1
2,666,621	+		ECD_02553	0.27	-0.3
2,666,622	-		ECD_02553	0.28	-0.9
2,666,675	+		ECD_02553	0.33	-0.7
2,666,675	+		ECD_02553	0.33	-1.2
2,666,675	+		ECD_02553	0.33	-0.0
2,666,676	-		ECD_02553	0.33	-3.2
2,666,679	+		ECD_02553	0.33	-1.1
2,666,679	+		ECD_02553	0.33	-1.3
2,666,679	+		ECD_02553	0.33	-1.0
2,666,679	+		ECD_02553	0.33	+0.1
2,666,679	+		ECD_02553	0.33	+0.3
2,666,679	+		ECD_02553	0.33	-0.9
2,666,679	+		ECD_02553	0.33	-0.6
2,666,679	+		ECD_02553	0.33	-0.1
2,666,679	+		ECD_02553	0.33	-0.4
2,666,679	+		ECD_02553	0.33	-0.5
2,666,680	-		ECD_02553	0.34	-2.0
2,666,680	-		ECD_02553	0.34	-1.2
2,666,680	-		ECD_02553	0.34	-3.0
2,666,680	-		ECD_02553	0.34	-0.6
2,666,680	-		ECD_02553	0.34	-0.7
2,666,692	+		ECD_02553	0.35	-0.4
2,666,713	+		ECD_02553	0.37	-1.1
2,666,713	+		ECD_02553	0.37	-2.1
2,666,713	+		ECD_02553	0.37	+0.6
2,666,713	+		ECD_02553	0.37	-1.0
2,666,713	+		ECD_02553	0.37	-1.5
2,666,714	-		ECD_02553	0.37	-2.0
2,666,714	-		ECD_02553	0.37	-2.1
2,666,716	+		ECD_02553	0.37	-0.7
2,666,716	+		ECD_02553	0.37	-1.1
2,666,757	+		ECD_02553	0.42	-0.9
2,666,758	-		ECD_02553	0.42	-0.3
2,666,758	-		ECD_02553	0.42	+1.1
2,666,876	-		ECD_02553	0.54	-1.8
2,666,876	-		ECD_02553	0.54	-1.8
2,666,876	-		ECD_02553	0.54	+0.5
2,666,879	-		ECD_02553	0.54	-1.7
2,666,897	+		ECD_02553	0.56	-1.7
2,666,930	+		ECD_02553	0.60	-2.1
2,666,931	-		ECD_02553	0.60	-0.5
2,667,062	+		ECD_02553	0.73	-0.1
2,667,063	-		ECD_02553	0.73	-1.5
2,667,083	-		ECD_02553	0.76	-0.8
2,667,241	+				+0.3
2,667,241	+				+0.6
2,667,242	-				-1.0
2,667,277	+				-1.4
2,667,277	+				+1.1
2,667,306	-				-0.1
2,667,306	-				-0.5
2,667,306	-				-0.4
2,667,309	+				-0.2
2,667,309	+				+0.8
2,667,310	-				-0.1
2,667,310	-				-0.3
2,667,310	-				-0.1
2,667,310	-				+0.0
2,667,310	-				-0.0
2,667,310	-				+0.0
2,667,337	-				-0.4
2,667,337	-				-0.8
2,667,337	-				-1.1
2,667,442	+		ECD_02554	0.31	+0.2
2,667,442	+		ECD_02554	0.31	+0.4
2,667,442	+		ECD_02554	0.31	-0.9
2,667,442	+		ECD_02554	0.31	+0.8
2,667,442	+		ECD_02554	0.31	+0.9
2,667,442	+		ECD_02554	0.31	-0.2
2,667,443	-		ECD_02554	0.31	+1.0
2,667,443	-		ECD_02554	0.31	+1.1
2,667,443	-		ECD_02554	0.31	-0.3
2,667,744	-				-2.7
2,667,841	-		ECD_02555	0.18	-0.8
2,667,850	+		ECD_02555	0.19	+0.2
2,667,851	-		ECD_02555	0.19	-0.6
2,667,868	+		ECD_02555	0.21	+0.4
2,667,868	+		ECD_02555	0.21	-0.4
2,667,869	-		ECD_02555	0.21	-1.2
2,667,962	-		ECD_02555	0.33	-2.2
2,667,962	-		ECD_02555	0.33	-1.7
2,667,962	-		ECD_02555	0.33	-3.2
2,667,962	-		ECD_02555	0.33	-3.8
2,668,048	+		ECD_02555	0.44	-0.0
2,668,048	+		ECD_02555	0.44	+0.8
2,668,225	+		ECD_02555	0.67	-0.8
2,668,233	+		ECD_02555	0.68	+0.7
2,668,300	+		ECD_02555	0.77	+0.3
2,668,300	+		ECD_02555	0.77	+0.3
2,668,300	+		ECD_02555	0.77	-0.1
2,668,300	+		ECD_02555	0.77	+0.2
2,668,300	+		ECD_02555	0.77	+1.2
2,668,300	+		ECD_02555	0.77	-0.1