Strain Fitness in Escherichia coli BL21 around ECD_03514

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_1
3,698,841	-		ECD_03513	0.53	+0.0
3,698,870	-		ECD_03513	0.55	-0.8
3,699,014	+		ECD_03513	0.63	-0.4
3,699,015	-		ECD_03513	0.63	-0.7
3,699,016	+		ECD_03513	0.63	+0.2
3,699,016	+		ECD_03513	0.63	-0.3
3,699,016	+		ECD_03513	0.63	-0.1
3,699,016	+		ECD_03513	0.63	+0.0
3,699,016	+		ECD_03513	0.63	-0.1
3,699,016	+		ECD_03513	0.63	-0.2
3,699,016	+		ECD_03513	0.63	-0.2
3,699,017	-		ECD_03513	0.63	-1.8
3,699,017	-		ECD_03513	0.63	-0.2
3,699,017	-		ECD_03513	0.63	-0.4
3,699,017	-		ECD_03513	0.63	-0.8
3,699,196	+		ECD_03513	0.74	-0.5
3,699,196	+		ECD_03513	0.74	-0.2
3,699,196	+		ECD_03513	0.74	-0.6
3,699,196	+		ECD_03513	0.74	-0.4
3,699,197	-		ECD_03513	0.74	-0.4
3,699,310	+		ECD_03513	0.80	+0.3
3,699,311	-		ECD_03513	0.81	-0.0
3,699,331	+		ECD_03513	0.82	-0.2
3,699,332	-		ECD_03513	0.82	-0.0
3,699,332	-		ECD_03513	0.82	+0.0
3,699,394	+		ECD_03513	0.85	-1.0
3,699,394	+		ECD_03513	0.85	-0.7
3,699,394	+		ECD_03513	0.85	-0.1
3,699,394	+		ECD_03513	0.85	+0.4
3,699,395	-		ECD_03513	0.85	-0.4
3,699,395	-		ECD_03513	0.85	-0.5
3,699,395	-		ECD_03513	0.85	-0.5
3,699,457	-		ECD_03513	0.89	-0.4
3,699,479	-				-0.4
3,699,529	+				-0.8
3,699,619	+				-0.6
3,699,619	+				+0.0
3,699,692	+				-0.2
3,699,692	+				-0.4
3,699,692	+				-0.7
3,699,697	+				-2.7
3,699,697	+				+1.1
3,699,697	+				-0.1
3,699,698	-				+0.1
3,699,698	-				-0.4
3,699,698	-				+0.1
3,699,698	-				-0.0
3,699,704	+				-0.6
3,699,704	+				-1.2
3,699,705	-				+1.1
3,699,705	-				-0.2
3,699,784	-				-0.1
3,699,860	+				-1.0
3,699,860	+				-1.3
3,699,861	-				-0.1
3,699,878	+				+0.6
3,699,878	+				-0.5
3,699,878	+				-0.4
3,699,878	+				-0.2
3,699,942	-		ECD_03514	0.11	+0.2
3,699,976	+		ECD_03514	0.12	-0.0
3,699,977	-		ECD_03514	0.12	-2.3
3,699,977	-		ECD_03514	0.12	-0.7
3,700,012	-		ECD_03514	0.14	-0.3
3,700,030	+		ECD_03514	0.14	-0.5
3,700,031	-		ECD_03514	0.14	+0.4
3,700,129	+		ECD_03514	0.19	+1.1
3,700,130	-		ECD_03514	0.19	+0.8
3,700,130	-		ECD_03514	0.19	+1.9
3,700,130	-		ECD_03514	0.19	+0.3
3,700,130	-		ECD_03514	0.19	+0.5
3,700,185	+		ECD_03514	0.21	+0.5
3,700,186	-		ECD_03514	0.21	+1.1
3,700,192	+		ECD_03514	0.21	-0.5
3,700,192	+		ECD_03514	0.21	+0.5
3,700,192	+		ECD_03514	0.21	-0.6
3,700,192	+		ECD_03514	0.21	-0.6
3,700,192	+		ECD_03514	0.21	-0.5
3,700,192	+		ECD_03514	0.21	+0.3
3,700,192	+		ECD_03514	0.21	-0.7
3,700,192	+		ECD_03514	0.21	+0.3
3,700,193	-		ECD_03514	0.21	+1.2
3,700,193	-		ECD_03514	0.21	+0.2
3,700,193	-		ECD_03514	0.21	-0.1
3,700,193	-		ECD_03514	0.21	-1.0
3,700,364	-		ECD_03514	0.29	-0.2
3,700,391	+		ECD_03514	0.30	-0.4
3,700,463	+		ECD_03514	0.33	-0.6
3,700,464	-		ECD_03514	0.33	+1.2
3,700,555	+		ECD_03514	0.37	-0.1
3,700,555	+		ECD_03514	0.37	-1.5
3,700,560	-		ECD_03514	0.37	-0.5
3,700,565	-		ECD_03514	0.37	+0.0
3,700,684	+		ECD_03514	0.43	-0.4
3,700,684	+		ECD_03514	0.43	+0.2
3,700,690	+		ECD_03514	0.43	-0.6
3,700,690	+		ECD_03514	0.43	-1.0
3,700,690	+		ECD_03514	0.43	-0.2
3,700,690	+		ECD_03514	0.43	-3.2
3,700,691	-		ECD_03514	0.43	-0.4
3,700,691	-		ECD_03514	0.43	+1.1
3,700,691	-		ECD_03514	0.43	-0.6
3,700,691	-		ECD_03514	0.43	-0.3
3,700,691	-		ECD_03514	0.43	-0.2
3,700,754	+		ECD_03514	0.46	+0.2
3,700,775	+		ECD_03514	0.47	-1.0
3,700,847	+		ECD_03514	0.50	-0.2
3,700,847	+		ECD_03514	0.50	-0.9
3,700,848	-		ECD_03514	0.50	-0.5
3,700,881	-		ECD_03514	0.51	-0.7
3,700,881	-		ECD_03514	0.51	+0.6
3,700,893	+		ECD_03514	0.52	-0.4
3,700,969	+		ECD_03514	0.55	-0.4
3,700,970	-		ECD_03514	0.55	+0.0
3,701,138	+		ECD_03514	0.62	-0.8
3,701,139	-		ECD_03514	0.62	+0.2
3,701,173	+		ECD_03514	0.64	-0.1
3,701,184	-		ECD_03514	0.64	+0.2
3,701,253	-		ECD_03514	0.67	-0.3
3,701,254	+		ECD_03514	0.67	-0.0
3,701,255	-		ECD_03514	0.67	-0.4
3,701,255	-		ECD_03514	0.67	+0.3
3,701,265	+		ECD_03514	0.68	-0.8
3,701,266	-		ECD_03514	0.68	-1.9
3,701,309	-		ECD_03514	0.70	-1.0
3,701,417	-		ECD_03514	0.74	+0.1
3,701,417	-		ECD_03514	0.74	+0.6
3,701,417	-		ECD_03514	0.74	+0.2
3,701,417	-		ECD_03514	0.74	-0.4
3,701,479	-		ECD_03514	0.77	+0.2
3,701,508	-		ECD_03514	0.78	+0.5
3,701,567	+		ECD_03514	0.81	-1.2
3,701,567	+		ECD_03514	0.81	-0.8
3,701,569	+		ECD_03514	0.81	-0.9
3,701,569	+		ECD_03514	0.81	-0.4
3,701,570	-		ECD_03514	0.81	+0.1
3,701,570	-		ECD_03514	0.81	+0.0
3,701,599	+		ECD_03514	0.82	-0.3
3,701,600	-		ECD_03514	0.82	+1.0
3,701,629	+		ECD_03514	0.83	-0.7
3,701,630	+		ECD_03514	0.83	-0.9
3,701,631	-		ECD_03514	0.83	+0.2
3,701,631	-		ECD_03514	0.83	+0.2
3,701,692	-		ECD_03514	0.86	-0.2
3,701,692	-		ECD_03514	0.86	-0.3
3,701,706	-		ECD_03514	0.87	+0.1
3,701,826	-				-0.3
3,701,826	-				+0.2
3,701,855	+				-0.4
3,701,856	-				-1.0
3,701,882	+				-1.1
3,701,883	-				+0.6
3,701,883	-				-0.1
3,701,883	-				-0.1
3,701,911	+				-1.3
3,701,912	-				-0.4
3,701,912	-				-0.2
3,701,912	-				-0.8
3,701,912	-				+0.3
3,701,912	-				-0.7
3,701,912	-				+0.0
3,702,006	-				+0.4
3,702,025	+				+0.7
3,702,026	-				+0.3
3,702,026	-				-0.3
3,702,026	-				-0.4
3,702,125	-				-0.3
3,702,127	+				+0.0
3,702,192	-		ECD_03515	0.12	-0.0
3,702,200	+		ECD_03515	0.13	-1.0
3,702,341	+		ECD_03515	0.23	-0.0
3,702,396	-		ECD_03515	0.27	-0.3
3,702,446	+		ECD_03515	0.31	-1.1
3,702,447	-		ECD_03515	0.31	-0.5
3,702,447	-		ECD_03515	0.31	-0.7
3,702,524	+		ECD_03515	0.36	-0.4
3,702,524	+		ECD_03515	0.36	-0.5
3,702,525	-		ECD_03515	0.36	+0.7
3,702,593	-		ECD_03515	0.41	+0.1
3,702,593	-		ECD_03515	0.41	-0.2
3,702,593	-		ECD_03515	0.41	+0.8
3,702,593	-		ECD_03515	0.41	+0.0
3,702,593	-		ECD_03515	0.41	+0.5
3,702,646	+		ECD_03515	0.45	+0.0
3,702,646	+		ECD_03515	0.45	-0.9
3,702,646	+		ECD_03515	0.45	-0.4
3,702,646	+		ECD_03515	0.45	-1.2
3,702,647	-		ECD_03515	0.45	-1.3
3,702,649	+		ECD_03515	0.45	-1.1
3,702,649	+		ECD_03515	0.45	-1.3
3,702,649	+		ECD_03515	0.45	-0.5
3,702,649	+		ECD_03515	0.45	-0.4
3,702,649	+		ECD_03515	0.45	-0.9
3,702,649	+		ECD_03515	0.45	-0.2
3,702,649	+		ECD_03515	0.45	-0.4
3,702,650	-		ECD_03515	0.45	+0.2
3,702,650	-		ECD_03515	0.45	-0.1
3,702,650	-		ECD_03515	0.45	-0.4
3,702,650	-		ECD_03515	0.45	-0.1
3,702,670	-		ECD_03515	0.47	+0.0
3,702,687	-		ECD_03515	0.48	-0.8
3,702,703	-		ECD_03515	0.49	-0.0
3,702,737	+		ECD_03515	0.52	-1.0
3,702,737	+		ECD_03515	0.52	-0.0
3,702,738	-		ECD_03515	0.52	-0.6
3,702,738	-		ECD_03515	0.52	+0.3
3,702,738	-		ECD_03515	0.52	-0.4
3,702,738	-		ECD_03515	0.52	-0.5
3,702,758	+		ECD_03515	0.53	-0.6
3,702,759	-		ECD_03515	0.53	-0.6
3,702,770	+		ECD_03515	0.54	-1.3
3,702,770	+		ECD_03515	0.54	+0.2
3,702,771	-		ECD_03515	0.54	-0.8
3,702,771	-		ECD_03515	0.54	-0.7
3,702,875	+		ECD_03515	0.62	-0.7
3,702,876	-		ECD_03515	0.62	+0.3
3,702,876	-		ECD_03515	0.62	+0.7
3,702,892	-		ECD_03515	0.63	+0.0
3,702,921	-		ECD_03515	0.65	-0.8
3,702,921	-		ECD_03515	0.65	-0.2
3,702,974	+		ECD_03515	0.69	-0.7
3,702,975	-		ECD_03515	0.69	-0.1