Strain Fitness in Escherichia coli BL21 around ECD_02573

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_1
2,686,410	+				+0.0
2,686,411	-				+0.4
2,686,411	-				+0.4
2,686,411	-				-0.4
2,686,411	-				+0.8
2,686,411	-				-0.1
2,686,421	+				-2.3
2,686,453	+				+0.0
2,686,512	+				-1.1
2,686,513	-				+0.6
2,686,513	-				+1.2
2,686,513	-				+1.9
2,686,525	-				+0.5
2,686,525	-				+0.1
2,686,525	-				+0.7
2,686,525	-				+0.7
2,686,525	-				+0.2
2,686,527	+				-1.1
2,686,527	+				-1.2
2,686,528	-				+0.9
2,686,595	-		ECD_02572	0.15	-1.8
2,686,663	-		ECD_02572	0.22	-0.4
2,686,746	-		ECD_02572	0.31	+1.6
2,686,746	-		ECD_02572	0.31	+0.3
2,686,746	-		ECD_02572	0.31	+0.5
2,686,853	-		ECD_02572	0.43	+0.6
2,686,886	+		ECD_02572	0.47	+0.7
2,686,887	-		ECD_02572	0.47	+0.2
2,686,887	-		ECD_02572	0.47	+1.0
2,687,075	+		ECD_02572	0.67	-1.4
2,687,075	+		ECD_02572	0.67	-0.4
2,687,075	+		ECD_02572	0.67	-0.8
2,687,075	+		ECD_02572	0.67	-0.9
2,687,075	+		ECD_02572	0.67	+0.0
2,687,075	+		ECD_02572	0.67	-1.5
2,687,076	-		ECD_02572	0.67	-1.1
2,687,076	-		ECD_02572	0.67	+0.7
2,687,076	-		ECD_02572	0.67	+0.7
2,687,076	-		ECD_02572	0.67	-1.0
2,687,076	-		ECD_02572	0.67	-1.3
2,687,076	-		ECD_02572	0.67	-0.4
2,687,080	+		ECD_02572	0.68	-1.0
2,687,080	+		ECD_02572	0.68	+0.4
2,687,080	+		ECD_02572	0.68	-0.1
2,687,080	+		ECD_02572	0.68	-0.2
2,687,080	+		ECD_02572	0.68	+0.1
2,687,080	+		ECD_02572	0.68	-0.4
2,687,081	-		ECD_02572	0.68	+0.8
2,687,081	-		ECD_02572	0.68	-0.2
2,687,081	-		ECD_02572	0.68	-0.1
2,687,081	-		ECD_02572	0.68	-0.1
2,687,081	-		ECD_02572	0.68	-0.5
2,687,081	-		ECD_02572	0.68	-1.8
2,687,175	-		ECD_02572	0.78	-0.8
2,687,175	-		ECD_02572	0.78	-1.8
2,687,175	-		ECD_02572	0.78	-0.1
2,687,253	-		ECD_02572	0.86	-0.2
2,687,284	-		ECD_02572	0.90	+0.1
2,687,311	-				-0.8
2,687,360	-				-0.4
2,687,368	+				-1.5
2,687,368	+				-1.7
2,687,368	+				-0.9
2,687,368	+				-1.8
2,687,368	+				-2.5
2,687,369	-				+0.0
2,687,369	-				-1.5
2,687,369	-				-0.2
2,687,369	-				-0.9
2,687,369	-				+0.7
2,687,369	-				+0.1
2,687,369	-				+0.4
2,687,402	+				-0.5
2,687,402	+				-1.1
2,687,402	+				-2.8
2,687,403	-				-0.5
2,687,657	+		ECD_02573	0.15	+0.1
2,687,748	+		ECD_02573	0.20	-0.0
2,687,749	-		ECD_02573	0.20	-0.8
2,687,749	-		ECD_02573	0.20	+0.9
2,687,749	-		ECD_02573	0.20	-1.5
2,687,749	-		ECD_02573	0.20	-1.5
2,687,799	+		ECD_02573	0.23	-1.1
2,687,800	-		ECD_02573	0.23	+0.7
2,687,800	-		ECD_02573	0.23	-0.2
2,687,800	-		ECD_02573	0.23	-0.8
2,687,823	+		ECD_02573	0.24	-1.1
2,687,829	+		ECD_02573	0.24	-0.6
2,687,829	+		ECD_02573	0.24	-0.5
2,687,830	-		ECD_02573	0.25	+0.1
2,687,830	-		ECD_02573	0.25	+0.4
2,687,830	-		ECD_02573	0.25	-0.8
2,687,830	-		ECD_02573	0.25	+0.8
2,687,918	+		ECD_02573	0.29	-2.4
2,687,919	-		ECD_02573	0.29	+0.1
2,687,919	-		ECD_02573	0.29	+0.6
2,687,943	-		ECD_02573	0.31	+1.3
2,688,000	-		ECD_02573	0.34	-0.1
2,688,000	-		ECD_02573	0.34	-1.6
2,688,000	-		ECD_02573	0.34	+0.2
2,688,025	+		ECD_02573	0.35	-0.1
2,688,025	+		ECD_02573	0.35	-0.1
2,688,025	+		ECD_02573	0.35	-1.2
2,688,025	+		ECD_02573	0.35	-1.1
2,688,026	-		ECD_02573	0.35	+0.6
2,688,026	-		ECD_02573	0.35	-0.9
2,688,026	-		ECD_02573	0.35	-1.3
2,688,090	+		ECD_02573	0.39	-2.2
2,688,108	-		ECD_02573	0.40	+0.7
2,688,129	-		ECD_02573	0.41	-0.2
2,688,195	+		ECD_02573	0.44	-1.4
2,688,195	+		ECD_02573	0.44	-0.7
2,688,195	+		ECD_02573	0.44	-0.0
2,688,195	+		ECD_02573	0.44	+0.7
2,688,195	+		ECD_02573	0.44	-1.6
2,688,196	-		ECD_02573	0.45	+0.4
2,688,213	-		ECD_02573	0.45	-0.8
2,688,213	-		ECD_02573	0.45	+1.9
2,688,219	-		ECD_02573	0.46	+0.3
2,688,229	+		ECD_02573	0.46	-0.1
2,688,288	+		ECD_02573	0.50	-0.6
2,688,315	-		ECD_02573	0.51	-0.2
2,688,340	+		ECD_02573	0.52	+0.2
2,688,341	-		ECD_02573	0.52	-0.3
2,688,341	-		ECD_02573	0.52	-0.5
2,688,379	+		ECD_02573	0.55	+0.3
2,688,379	+		ECD_02573	0.55	-0.2
2,688,379	+		ECD_02573	0.55	-2.0
2,688,380	-		ECD_02573	0.55	+0.2
2,688,380	-		ECD_02573	0.55	-2.0
2,688,450	-		ECD_02573	0.58	-1.4
2,688,471	+		ECD_02573	0.60	-1.1
2,688,471	+		ECD_02573	0.60	-0.2
2,688,472	-		ECD_02573	0.60	+0.4
2,688,472	-		ECD_02573	0.60	+0.6
2,688,472	-		ECD_02573	0.60	+0.9
2,688,576	-		ECD_02573	0.65	-0.5
2,688,648	-		ECD_02573	0.69	-0.9
2,688,654	-		ECD_02573	0.70	+0.1
2,688,813	+		ECD_02573	0.78	-1.1
2,688,813	+		ECD_02573	0.78	-2.0
2,688,814	-		ECD_02573	0.78	+0.6
2,688,872	+		ECD_02573	0.82	-0.5
2,688,873	-		ECD_02573	0.82	-0.7
2,688,873	-		ECD_02573	0.82	-0.1
2,688,873	-		ECD_02573	0.82	+1.4
2,688,873	-		ECD_02573	0.82	+0.6
2,688,929	-		ECD_02573	0.85	-1.5
2,688,929	-		ECD_02573	0.85	+0.2
2,688,963	-		ECD_02573	0.87	-0.6
2,689,003	+		ECD_02573	0.89	+0.3
2,689,003	+		ECD_02573	0.89	-0.1
2,689,003	+		ECD_02573	0.89	-1.5
2,689,003	+		ECD_02573	0.89	-1.4
2,689,004	-		ECD_02573	0.89	+0.6
2,689,004	-		ECD_02573	0.89	-1.2
2,689,004	-		ECD_02573	0.89	+0.1
2,689,004	-		ECD_02573	0.89	-0.9
2,689,004	-		ECD_02573	0.89	+1.1
2,689,004	-		ECD_02573	0.89	+0.2
2,689,004	-		ECD_02573	0.89	-0.5
2,689,004	-		ECD_02573	0.89	-1.8
2,689,004	-		ECD_02573	0.89	-0.1
2,689,004	-		ECD_02573	0.89	-1.5
2,689,004	-		ECD_02573	0.89	+0.3
2,689,050	+				-0.6
2,689,050	+				-1.4
2,689,051	-				-0.5
2,689,051	-				+1.2
2,689,051	-				-0.1
2,689,051	-				+0.9
2,689,051	-				+0.2
2,689,075	+				-1.3
2,689,075	+				-1.6
2,689,075	+				-3.0
2,689,076	-				-0.2
2,689,076	-				-1.1
2,689,076	-				+1.2
2,689,076	-				+0.3
2,689,076	-				+1.1
2,689,076	-				+0.7
2,689,076	-				-0.6
2,689,083	-				-0.3
2,689,083	-				+0.7
2,689,119	+				+0.9
2,689,211	-				+0.1
2,689,211	-				-0.0
2,689,283	-		ECD_02574	0.13	-0.8
2,689,283	-		ECD_02574	0.13	-1.9
2,689,283	-		ECD_02574	0.13	-0.8
2,689,334	-		ECD_02574	0.21	+0.1
2,689,378	+		ECD_02574	0.28	-0.2
2,689,378	+		ECD_02574	0.28	-0.1
2,689,378	+		ECD_02574	0.28	+0.4
2,689,378	+		ECD_02574	0.28	-1.4
2,689,378	+		ECD_02574	0.28	-1.7
2,689,378	+		ECD_02574	0.28	-0.3
2,689,378	+		ECD_02574	0.28	-0.6
2,689,378	+		ECD_02574	0.28	+0.7
2,689,379	-		ECD_02574	0.28	-0.8
2,689,379	-		ECD_02574	0.28	-0.6
2,689,379	-		ECD_02574	0.28	-1.3
2,689,379	-		ECD_02574	0.28	+0.4
2,689,379	-		ECD_02574	0.28	+0.2
2,689,379	-		ECD_02574	0.28	+0.9
2,689,412	-		ECD_02574	0.34	-0.4
2,689,568	+		ECD_02574	0.59	-1.8
2,689,569	-		ECD_02574	0.59	-1.5
2,689,803	-				-1.1
2,689,803	-				-0.1
2,689,912	-				-0.2
2,689,912	-				+1.1
2,690,003	+		ECD_02575	0.13	-0.9
2,690,011	+		ECD_02575	0.15	-1.0
2,690,011	+		ECD_02575	0.15	-0.4
2,690,011	+		ECD_02575	0.15	-2.9
2,690,011	+		ECD_02575	0.15	-2.2
2,690,011	+		ECD_02575	0.15	-0.5
2,690,011	+		ECD_02575	0.15	-0.7
2,690,011	+		ECD_02575	0.15	-0.4
2,690,012	-		ECD_02575	0.15	-0.5
2,690,012	-		ECD_02575	0.15	+0.1
2,690,012	-		ECD_02575	0.15	-0.7
2,690,012	-		ECD_02575	0.15	+0.9
2,690,012	-		ECD_02575	0.15	-1.2
2,690,012	-		ECD_02575	0.15	+0.3
2,690,012	-		ECD_02575	0.15	+0.3
2,690,012	-		ECD_02575	0.15	+0.6
2,690,012	-		ECD_02575	0.15	-0.0
2,690,012	-		ECD_02575	0.15	+0.1
2,690,013	+		ECD_02575	0.16	-0.2
2,690,013	+		ECD_02575	0.16	-1.5
2,690,013	+		ECD_02575	0.16	-2.9
2,690,013	+		ECD_02575	0.16	-1.1
2,690,013	+		ECD_02575	0.16	-0.4
2,690,013	+		ECD_02575	0.16	-1.1
2,690,014	-		ECD_02575	0.16	-0.7
2,690,014	-		ECD_02575	0.16	+0.4
2,690,014	-		ECD_02575	0.16	+0.4
2,690,014	-		ECD_02575	0.16	-0.3
2,690,014	-		ECD_02575	0.16	+0.3
2,690,014	-		ECD_02575	0.16	+0.2
2,690,014	-		ECD_02575	0.16	-0.3
2,690,014	-		ECD_02575	0.16	+0.7
2,690,014	-		ECD_02575	0.16	+0.7
2,690,014	-		ECD_02575	0.16	+0.1
2,690,023	+		ECD_02575	0.18	-1.0
2,690,047	+		ECD_02575	0.23	+0.9
2,690,047	+		ECD_02575	0.23	-2.0
2,690,047	+		ECD_02575	0.23	-0.3
2,690,047	+		ECD_02575	0.23	-1.5
2,690,047	+		ECD_02575	0.23	-3.1
2,690,048	-		ECD_02575	0.23	-0.0
2,690,048	-		ECD_02575	0.23	-0.1
2,690,048	-		ECD_02575	0.23	+0.3
2,690,048	-		ECD_02575	0.23	+1.3
2,690,048	-		ECD_02575	0.23	-0.6
2,690,048	-		ECD_02575	0.23	-0.5
2,690,164	+		ECD_02575	0.48	+1.8
2,690,164	+		ECD_02575	0.48	-0.2
2,690,165	-		ECD_02575	0.48	+0.5
2,690,165	-		ECD_02575	0.48	+1.1
2,690,165	-		ECD_02575	0.48	+0.9
2,690,165	-		ECD_02575	0.48	+0.0
2,690,165	-		ECD_02575	0.48	-0.6
2,690,165	-		ECD_02575	0.48	+1.1
2,690,165	-		ECD_02575	0.48	-0.4
2,690,165	-		ECD_02575	0.48	-0.1
2,690,167	+		ECD_02575	0.49	-0.8
2,690,167	+		ECD_02575	0.49	-1.7
2,690,168	-		ECD_02575	0.49	+1.0
2,690,168	-		ECD_02575	0.49	+0.2
2,690,179	-		ECD_02575	0.52	+0.5
2,690,187	-		ECD_02575	0.53	-0.3