Strain Fitness in Escherichia coli BL21 around ECD_02572

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_1
2,685,465	+		ECD_02571	0.43	-1.5
2,685,465	+		ECD_02571	0.43	+1.0
2,685,472	+		ECD_02571	0.43	-1.5
2,685,535	+		ECD_02571	0.47	-1.2
2,685,535	+		ECD_02571	0.47	+0.3
2,685,535	+		ECD_02571	0.47	-0.9
2,685,535	+		ECD_02571	0.47	-0.7
2,685,535	+		ECD_02571	0.47	-0.4
2,685,536	-		ECD_02571	0.47	-0.0
2,685,656	-		ECD_02571	0.54	+0.4
2,685,685	-		ECD_02571	0.56	-0.6
2,685,685	-		ECD_02571	0.56	+0.2
2,685,748	+		ECD_02571	0.60	-0.5
2,685,750	+		ECD_02571	0.60	-1.2
2,685,750	+		ECD_02571	0.60	-2.1
2,685,751	-		ECD_02571	0.60	+0.5
2,685,795	+		ECD_02571	0.62	-0.7
2,685,795	+		ECD_02571	0.62	-0.8
2,685,795	+		ECD_02571	0.62	-1.1
2,685,795	+		ECD_02571	0.62	-0.4
2,685,795	+		ECD_02571	0.62	+0.0
2,685,795	+		ECD_02571	0.62	-2.5
2,685,795	+		ECD_02571	0.62	-2.3
2,685,795	+		ECD_02571	0.62	-0.2
2,685,796	-		ECD_02571	0.62	-1.4
2,685,796	-		ECD_02571	0.62	+0.2
2,685,796	-		ECD_02571	0.62	+0.6
2,685,796	-		ECD_02571	0.62	-0.5
2,685,796	-		ECD_02571	0.62	+0.1
2,685,796	-		ECD_02571	0.62	-0.8
2,685,796	-		ECD_02571	0.62	+0.4
2,685,796	-		ECD_02571	0.62	+1.0
2,685,796	-		ECD_02571	0.62	-1.1
2,685,807	+		ECD_02571	0.63	+0.3
2,685,936	+		ECD_02571	0.71	-0.2
2,685,937	-		ECD_02571	0.71	+0.4
2,685,937	-		ECD_02571	0.71	-0.9
2,685,975	+		ECD_02571	0.73	-0.7
2,685,991	+		ECD_02571	0.74	-1.0
2,686,002	+		ECD_02571	0.74	-0.2
2,686,074	+		ECD_02571	0.79	-0.1
2,686,074	+		ECD_02571	0.79	-3.3
2,686,074	+		ECD_02571	0.79	-0.8
2,686,074	+		ECD_02571	0.79	-1.1
2,686,075	-		ECD_02571	0.79	-0.9
2,686,075	-		ECD_02571	0.79	-0.2
2,686,075	-		ECD_02571	0.79	-0.0
2,686,075	-		ECD_02571	0.79	+0.1
2,686,079	-		ECD_02571	0.79	-0.1
2,686,079	-		ECD_02571	0.79	+0.4
2,686,079	-		ECD_02571	0.79	-0.6
2,686,079	-		ECD_02571	0.79	-0.4
2,686,137	+		ECD_02571	0.82	-2.1
2,686,138	-		ECD_02571	0.82	-0.3
2,686,186	+		ECD_02571	0.85	-1.1
2,686,186	+		ECD_02571	0.85	-0.7
2,686,186	+		ECD_02571	0.85	-1.1
2,686,187	-		ECD_02571	0.85	+0.9
2,686,187	-		ECD_02571	0.85	+0.5
2,686,187	-		ECD_02571	0.85	-0.0
2,686,212	+		ECD_02571	0.87	-1.1
2,686,213	-		ECD_02571	0.87	+0.8
2,686,213	-		ECD_02571	0.87	+0.7
2,686,213	-		ECD_02571	0.87	-0.2
2,686,213	-		ECD_02571	0.87	+0.3
2,686,213	-		ECD_02571	0.87	+0.1
2,686,213	-		ECD_02571	0.87	-0.2
2,686,213	-		ECD_02571	0.87	-0.4
2,686,213	-		ECD_02571	0.87	+0.6
2,686,213	-		ECD_02571	0.87	-0.2
2,686,213	-		ECD_02571	0.87	+0.6
2,686,213	-		ECD_02571	0.87	+0.0
2,686,215	+		ECD_02571	0.87	+1.9
2,686,215	+		ECD_02571	0.87	-0.3
2,686,215	+		ECD_02571	0.87	-1.0
2,686,215	+		ECD_02571	0.87	+1.9
2,686,215	+		ECD_02571	0.87	-0.8
2,686,216	-		ECD_02571	0.87	-0.0
2,686,216	-		ECD_02571	0.87	+0.3
2,686,216	-		ECD_02571	0.87	+0.4
2,686,224	+		ECD_02571	0.87	-1.1
2,686,225	-		ECD_02571	0.87	-0.3
2,686,287	+				-0.1
2,686,288	-				+0.7
2,686,288	-				-0.2
2,686,288	-				-0.1
2,686,288	-				+0.2
2,686,288	-				+0.6
2,686,290	+				-2.2
2,686,290	+				-0.9
2,686,291	-				-0.2
2,686,291	-				-1.9
2,686,317	+				-0.8
2,686,317	+				-2.1
2,686,317	+				-1.5
2,686,317	+				-0.7
2,686,317	+				-1.3
2,686,317	+				-0.6
2,686,317	+				-0.7
2,686,317	+				-0.5
2,686,318	-				-0.3
2,686,318	-				+0.2
2,686,318	-				-0.8
2,686,318	-				+0.5
2,686,318	-				+0.3
2,686,318	-				+0.9
2,686,329	-				+0.7
2,686,329	-				+1.2
2,686,410	+				+0.0
2,686,411	-				+0.4
2,686,411	-				+0.4
2,686,411	-				-0.4
2,686,411	-				+0.8
2,686,411	-				-0.1
2,686,421	+				-2.3
2,686,453	+				+0.0
2,686,512	+				-1.1
2,686,513	-				+0.6
2,686,513	-				+1.2
2,686,513	-				+1.9
2,686,525	-				+0.5
2,686,525	-				+0.1
2,686,525	-				+0.7
2,686,525	-				+0.7
2,686,525	-				+0.2
2,686,527	+				-1.1
2,686,527	+				-1.2
2,686,528	-				+0.9
2,686,595	-		ECD_02572	0.15	-1.8
2,686,663	-		ECD_02572	0.22	-0.4
2,686,746	-		ECD_02572	0.31	+1.6
2,686,746	-		ECD_02572	0.31	+0.3
2,686,746	-		ECD_02572	0.31	+0.5
2,686,853	-		ECD_02572	0.43	+0.6
2,686,886	+		ECD_02572	0.47	+0.7
2,686,887	-		ECD_02572	0.47	+0.2
2,686,887	-		ECD_02572	0.47	+1.0
2,687,075	+		ECD_02572	0.67	-1.4
2,687,075	+		ECD_02572	0.67	-0.4
2,687,075	+		ECD_02572	0.67	-0.8
2,687,075	+		ECD_02572	0.67	-0.9
2,687,075	+		ECD_02572	0.67	+0.0
2,687,075	+		ECD_02572	0.67	-1.5
2,687,076	-		ECD_02572	0.67	-1.1
2,687,076	-		ECD_02572	0.67	+0.7
2,687,076	-		ECD_02572	0.67	+0.7
2,687,076	-		ECD_02572	0.67	-1.0
2,687,076	-		ECD_02572	0.67	-1.3
2,687,076	-		ECD_02572	0.67	-0.4
2,687,080	+		ECD_02572	0.68	-1.0
2,687,080	+		ECD_02572	0.68	+0.4
2,687,080	+		ECD_02572	0.68	-0.1
2,687,080	+		ECD_02572	0.68	-0.2
2,687,080	+		ECD_02572	0.68	+0.1
2,687,080	+		ECD_02572	0.68	-0.4
2,687,081	-		ECD_02572	0.68	+0.8
2,687,081	-		ECD_02572	0.68	-0.2
2,687,081	-		ECD_02572	0.68	-0.1
2,687,081	-		ECD_02572	0.68	-0.1
2,687,081	-		ECD_02572	0.68	-0.5
2,687,081	-		ECD_02572	0.68	-1.8
2,687,175	-		ECD_02572	0.78	-0.8
2,687,175	-		ECD_02572	0.78	-1.8
2,687,175	-		ECD_02572	0.78	-0.1
2,687,253	-		ECD_02572	0.86	-0.2
2,687,284	-		ECD_02572	0.90	+0.1
2,687,311	-				-0.8
2,687,360	-				-0.4
2,687,368	+				-1.5
2,687,368	+				-1.7
2,687,368	+				-0.9
2,687,368	+				-1.8
2,687,368	+				-2.5
2,687,369	-				+0.0
2,687,369	-				-1.5
2,687,369	-				-0.2
2,687,369	-				-0.9
2,687,369	-				+0.7
2,687,369	-				+0.1
2,687,369	-				+0.4
2,687,402	+				-0.5
2,687,402	+				-1.1
2,687,402	+				-2.8
2,687,403	-				-0.5
2,687,657	+		ECD_02573	0.15	+0.1
2,687,748	+		ECD_02573	0.20	-0.0
2,687,749	-		ECD_02573	0.20	-0.8
2,687,749	-		ECD_02573	0.20	+0.9
2,687,749	-		ECD_02573	0.20	-1.5
2,687,749	-		ECD_02573	0.20	-1.5
2,687,799	+		ECD_02573	0.23	-1.1
2,687,800	-		ECD_02573	0.23	+0.7
2,687,800	-		ECD_02573	0.23	-0.2
2,687,800	-		ECD_02573	0.23	-0.8
2,687,823	+		ECD_02573	0.24	-1.1
2,687,829	+		ECD_02573	0.24	-0.6
2,687,829	+		ECD_02573	0.24	-0.5
2,687,830	-		ECD_02573	0.25	+0.1
2,687,830	-		ECD_02573	0.25	+0.4
2,687,830	-		ECD_02573	0.25	-0.8
2,687,830	-		ECD_02573	0.25	+0.8
2,687,918	+		ECD_02573	0.29	-2.4
2,687,919	-		ECD_02573	0.29	+0.1
2,687,919	-		ECD_02573	0.29	+0.6
2,687,943	-		ECD_02573	0.31	+1.3
2,688,000	-		ECD_02573	0.34	-0.1
2,688,000	-		ECD_02573	0.34	-1.6
2,688,000	-		ECD_02573	0.34	+0.2
2,688,025	+		ECD_02573	0.35	-0.1
2,688,025	+		ECD_02573	0.35	-0.1
2,688,025	+		ECD_02573	0.35	-1.2
2,688,025	+		ECD_02573	0.35	-1.1
2,688,026	-		ECD_02573	0.35	+0.6
2,688,026	-		ECD_02573	0.35	-0.9
2,688,026	-		ECD_02573	0.35	-1.3
2,688,090	+		ECD_02573	0.39	-2.2
2,688,108	-		ECD_02573	0.40	+0.7
2,688,129	-		ECD_02573	0.41	-0.2
2,688,195	+		ECD_02573	0.44	-1.4
2,688,195	+		ECD_02573	0.44	-0.7
2,688,195	+		ECD_02573	0.44	-0.0
2,688,195	+		ECD_02573	0.44	+0.7
2,688,195	+		ECD_02573	0.44	-1.6
2,688,196	-		ECD_02573	0.45	+0.4
2,688,213	-		ECD_02573	0.45	-0.8
2,688,213	-		ECD_02573	0.45	+1.9
2,688,219	-		ECD_02573	0.46	+0.3
2,688,229	+		ECD_02573	0.46	-0.1
2,688,288	+		ECD_02573	0.50	-0.6
2,688,315	-		ECD_02573	0.51	-0.2
2,688,340	+		ECD_02573	0.52	+0.2
2,688,341	-		ECD_02573	0.52	-0.3
2,688,341	-		ECD_02573	0.52	-0.5
2,688,379	+		ECD_02573	0.55	+0.3
2,688,379	+		ECD_02573	0.55	-0.2
2,688,379	+		ECD_02573	0.55	-2.0