Strain Fitness in Escherichia coli BL21 around ECD_02529

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus HD100_1
2,639,586	-		ECD_02527	0.22	-0.1
2,639,609	-		ECD_02527	0.29	-0.9
2,639,613	-		ECD_02527	0.30	-0.2
2,639,613	-		ECD_02527	0.30	-0.6
2,639,689	+		ECD_02527	0.52	-2.7
2,639,690	-		ECD_02527	0.52	-0.7
2,639,690	-		ECD_02527	0.52	-2.9
2,639,690	-		ECD_02527	0.52	-3.3
2,639,716	-		ECD_02527	0.60	-0.4
2,639,744	+		ECD_02527	0.68	-1.6
2,639,744	+		ECD_02527	0.68	-2.9
2,639,744	+		ECD_02527	0.68	-1.8
2,639,745	-		ECD_02527	0.68	-2.7
2,639,745	-		ECD_02527	0.68	-2.3
2,639,745	-		ECD_02527	0.68	-0.6
2,639,745	-		ECD_02527	0.68	-1.9
2,639,745	-		ECD_02527	0.68	-0.6
2,639,745	-		ECD_02527	0.68	-2.0
2,639,750	+		ECD_02527	0.70	-2.2
2,639,751	-		ECD_02527	0.70	+0.4
2,639,774	+		ECD_02527	0.77	-1.9
2,639,774	+		ECD_02527	0.77	-0.6
2,639,788	+		ECD_02527	0.81	-1.1
2,639,803	-		ECD_02527	0.85	-0.6
2,639,803	-		ECD_02527	0.85	-1.4
2,639,821	+				-1.1
2,639,821	+				-2.1
2,639,845	+				-3.5
2,639,846	-				-1.0
2,639,846	-				-0.4
2,639,849	+				-0.8
2,639,849	+				+1.1
2,639,849	+				-0.6
2,639,849	+				-1.2
2,639,849	+				+0.4
2,639,850	-				+0.0
2,639,850	-				+0.2
2,639,850	-				-0.3
2,639,850	-				-1.6
2,639,850	-				-0.5
2,639,850	-				-2.0
2,639,850	-				+0.0
2,639,850	-				-0.3
2,639,850	-				-1.4
2,639,850	-				-0.0
2,639,853	+				-1.0
2,639,853	+				-0.7
2,639,854	-				-0.5
2,639,854	-				-0.7
2,639,870	+				-0.8
2,639,870	+				-0.7
2,639,871	-				+0.0
2,639,871	-				+0.1
2,639,871	-				+1.3
2,639,885	+				-0.1
2,639,886	-				-0.8
2,639,886	-				+0.8
2,639,889	+				-0.1
2,639,890	+				-0.9
2,639,890	+				+0.5
2,639,891	-				-1.2
2,639,967	+				+0.9
2,639,979	+				+0.5
2,640,004	+				+0.2
2,640,004	+				-0.5
2,640,004	+				-1.5
2,640,004	+				-0.7
2,640,004	+				-0.5
2,640,004	+				+0.1
2,640,004	+				-1.9
2,640,004	+				-2.9
2,640,004	+				+0.3
2,640,005	-				-0.4
2,640,075	+		ECD_02528	0.21	-0.5
2,640,075	+		ECD_02528	0.21	+1.0
2,640,075	+		ECD_02528	0.21	-0.4
2,640,096	+		ECD_02528	0.28	+1.0
2,640,096	+		ECD_02528	0.28	+0.3
2,640,148	+		ECD_02528	0.43	-0.0
2,640,149	-		ECD_02528	0.44	-0.5
2,640,149	-		ECD_02528	0.44	+0.6
2,640,196	+		ECD_02528	0.58	-0.5
2,640,196	+		ECD_02528	0.58	-0.0
2,640,268	+		ECD_02528	0.80	+0.2
2,640,269	-		ECD_02528	0.80	-2.2
2,640,269	-		ECD_02528	0.80	-0.2
2,640,295	+		ECD_02528	0.88	+1.0
2,640,296	-		ECD_02528	0.88	+1.2
2,640,296	-		ECD_02528	0.88	-1.5
2,640,296	-		ECD_02528	0.88	-0.8
2,640,315	+				+0.0
2,640,316	-				-0.6
2,640,316	-				+0.9
2,640,349	+				-0.1
2,640,349	+				+2.0
2,640,349	+				-0.3
2,640,349	+				+0.5
2,640,350	-				-0.7
2,640,353	+				+0.1
2,640,469	-				+1.0
2,640,471	-				+0.3
2,640,503	+				+0.6
2,640,593	+				+0.2
2,640,597	+				+0.6
2,640,605	+				-1.2
2,640,758	+		ECD_02529	0.72	-1.0
2,640,758	+		ECD_02529	0.72	-0.5
2,640,758	+		ECD_02529	0.72	-1.3
2,640,759	-		ECD_02529	0.72	-1.8
2,640,759	-		ECD_02529	0.72	-1.7
2,640,788	+		ECD_02529	0.84	-1.3
2,640,788	+		ECD_02529	0.84	-1.5
2,640,839	+				-1.2
2,640,840	-				-0.5
2,640,885	+		ECD_02530	0.15	+1.0
2,640,936	+		ECD_02530	0.27	+0.4
2,640,937	-		ECD_02530	0.27	+0.5
2,640,947	+		ECD_02530	0.30	+0.3
2,640,947	+		ECD_02530	0.30	-0.2
2,640,947	+		ECD_02530	0.30	-2.4
2,640,947	+		ECD_02530	0.30	+0.1
2,640,947	+		ECD_02530	0.30	+0.6
2,640,947	+		ECD_02530	0.30	+0.4
2,640,947	+		ECD_02530	0.30	+2.4
2,640,947	+		ECD_02530	0.30	+0.0
2,640,947	+		ECD_02530	0.30	-0.9
2,640,947	+		ECD_02530	0.30	+0.3
2,640,947	+		ECD_02530	0.30	-0.1
2,640,947	+		ECD_02530	0.30	+0.7
2,640,947	+		ECD_02530	0.30	+0.2
2,640,947	+		ECD_02530	0.30	+0.9
2,640,948	-		ECD_02530	0.30	-0.0
2,640,948	-		ECD_02530	0.30	+0.4
2,640,948	-		ECD_02530	0.30	+0.4
2,640,948	-		ECD_02530	0.30	+0.0
2,640,948	-		ECD_02530	0.30	-1.1
2,640,948	-		ECD_02530	0.30	+0.5
2,640,948	-		ECD_02530	0.30	+0.2
2,640,948	-		ECD_02530	0.30	+0.9
2,640,948	-		ECD_02530	0.30	+0.6
2,640,948	-		ECD_02530	0.30	+0.8
2,640,948	-		ECD_02530	0.30	+0.2
2,640,948	-		ECD_02530	0.30	-0.7
2,640,948	-		ECD_02530	0.30	-0.6
2,640,948	-		ECD_02530	0.30	+1.0
2,640,948	-		ECD_02530	0.30	-1.1
2,640,948	-		ECD_02530	0.30	+1.4
2,640,948	-		ECD_02530	0.30	-0.5
2,640,948	-		ECD_02530	0.30	-0.4
2,640,948	-		ECD_02530	0.30	-0.5
2,640,948	-		ECD_02530	0.30	-0.5
2,640,968	+		ECD_02530	0.35	-0.6
2,640,968	+		ECD_02530	0.35	+1.3
2,641,008	+		ECD_02530	0.45	+0.5
2,641,009	-		ECD_02530	0.45	+0.5
2,641,009	-		ECD_02530	0.45	+0.4
2,641,009	-		ECD_02530	0.45	-0.5
2,641,009	-		ECD_02530	0.45	-2.3
2,641,057	+		ECD_02530	0.57	+0.1
2,641,058	-		ECD_02530	0.57	+0.3
2,641,091	+		ECD_02530	0.65	+0.9
2,641,091	+		ECD_02530	0.65	+1.2
2,641,092	-		ECD_02530	0.65	-1.1
2,641,092	-		ECD_02530	0.65	-2.0
2,641,142	+		ECD_02530	0.77	+0.2
2,641,163	-		ECD_02530	0.82	+0.9
2,641,189	+		ECD_02530	0.89	+1.1
2,641,253	-				-2.3
2,641,282	+				+0.1
2,641,283	-				-1.0
2,641,283	-				-0.0
2,641,283	-				-0.4
2,641,283	-				-2.4
2,641,338	+				-0.0
2,641,339	-				-2.5
2,641,417	+				-0.1
2,641,417	+				-1.8
2,641,418	-				-2.0
2,641,418	-				-1.0
2,641,420	+				-2.1
2,641,420	+				+0.4
2,641,420	+				-1.4
2,641,420	+				-0.7
2,641,420	+				-0.0
2,641,420	+				-0.4
2,641,420	+				-1.7
2,641,420	+				-1.3
2,641,421	-				-1.1
2,641,421	-				-0.3
2,641,421	-				-2.0
2,641,421	-				+0.2
2,641,421	-				-0.7
2,641,421	-				-1.4
2,641,421	-				-0.3
2,641,421	-				-1.6
2,641,421	-				-0.4
2,641,437	+		ECD_02531	0.11	-2.4
2,641,465	-		ECD_02531	0.12	-1.7
2,641,465	-		ECD_02531	0.12	-0.7
2,641,540	+		ECD_02531	0.16	-1.2
2,641,540	+		ECD_02531	0.16	+0.8
2,641,540	+		ECD_02531	0.16	-0.2
2,641,540	+		ECD_02531	0.16	+0.4
2,641,540	+		ECD_02531	0.16	-0.0
2,641,540	+		ECD_02531	0.16	-0.9
2,641,540	+		ECD_02531	0.16	-0.2
2,641,540	+		ECD_02531	0.16	-1.2
2,641,541	-		ECD_02531	0.16	+0.3
2,641,541	-		ECD_02531	0.16	-0.4
2,641,541	-		ECD_02531	0.16	+1.1
2,641,541	-		ECD_02531	0.16	-0.2
2,641,541	-		ECD_02531	0.16	-0.4
2,641,541	-		ECD_02531	0.16	-0.2
2,641,541	-		ECD_02531	0.16	+0.5
2,641,541	-		ECD_02531	0.16	+0.3
2,641,541	-		ECD_02531	0.16	-0.7
2,641,542	+		ECD_02531	0.16	-0.5
2,641,542	+		ECD_02531	0.16	-0.4
2,641,542	+		ECD_02531	0.16	+1.1
2,641,542	+		ECD_02531	0.16	-1.5
2,641,542	+		ECD_02531	0.16	-1.6
2,641,542	+		ECD_02531	0.16	+0.5
2,641,542	+		ECD_02531	0.16	-0.5
2,641,542	+		ECD_02531	0.16	-2.1
2,641,543	-		ECD_02531	0.16	-1.1
2,641,543	-		ECD_02531	0.16	+0.5
2,641,543	-		ECD_02531	0.16	-1.9
2,641,543	-		ECD_02531	0.16	-0.1
2,641,543	-		ECD_02531	0.16	-0.9
2,641,543	-		ECD_02531	0.16	-1.2
2,641,543	-		ECD_02531	0.16	+0.7
2,641,564	-		ECD_02531	0.17	-2.7
2,641,571	-		ECD_02531	0.17	-0.0
2,641,752	+		ECD_02531	0.25	-0.1
2,641,753	-		ECD_02531	0.25	-2.3
2,641,764	+		ECD_02531	0.26	-0.6
2,641,765	-		ECD_02531	0.26	-2.0